RNA–Protein interactions for RNA: YHL002W

HSE1, Transcript of Subunit of the endosomal Vps27p-Hse1p complex, yeast

Gene HSE1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSE1	YHL002W	BLS1	Q06071	122 aa		4.28	□□□□□ -1.72
HSE1	YHL002W	TPK1	P06244	397 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	APA1	P16550	321 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	SRP54	P20424	541 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	SOF1	P33750	489 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	YAT2	P40017	923 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	COG1	P53079	417 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	CIA1	Q05583	330 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	TMA16	Q08687	178 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	CBP1	P07252	654 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	PGI1	P12709	554 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	VRG4	P40107	337 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	ARC35	P53731	342 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	DIG1	Q03063	452 aa	Known RBP	4.27	□□□□□ -1.73
HSE1	YHL002W	GRS2	Q06817	618 aa		4.27	□□□□□ -1.73
HSE1	YHL002W	PET111	P08468	800 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-LR1	P0C2J4	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-F	P0CX61	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-GR2	P0CX62	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	UBC1	P21734	215 aa	Known RBP	4.26	□□□□□ -1.73
HSE1	YHL002W	TKL1	P23254	680 aa	Known RBP	4.26	□□□□□ -1.73
HSE1	YHL002W	STE50	P25344	346 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-C	P25383	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	RAD16	P31244	790 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TFC3	P34111	1160 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	AAP1	P37898	856 aa	Known RBP	4.26	□□□□□ -1.73
HSE1	YHL002W	MNN2	P38069	597 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	SEC31	P38968	1273 aa	Known RBP	4.26	□□□□□ -1.73
HSE1	YHL002W	ASI1	P54074	624 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-DR2	Q03483	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-B	Q12260	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-OR2	Q12293	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-DR1	Q12392	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-OR1	Q12439	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	ERG27	Q12452	347 aa	Known RBP	4.26	□□□□□ -1.73
HSE1	YHL002W	PCD1	Q12524	340 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	TY2A-DR3	Q99303	438 aa		4.26	□□□□□ -1.73
HSE1	YHL002W	CHO1	P08456	276 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	DBF20	P32328	564 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	NTR2	P36118	322 aa	Predicted RBP	4.25	□□□□□ -1.73
HSE1	YHL002W	IST3	P40565	148 aa	Predicted RBP	4.25	□□□□□ -1.73
HSE1	YHL002W	SMK1	P41808	388 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	SAD1	P43589	448 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	ARP9	Q05123	467 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	YLR281C	Q05863	155 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	UTP21	Q06078	939 aa	Predicted RBP	4.25	□□□□□ -1.73
HSE1	YHL002W	MCP2	Q06567	569 aa		4.25	□□□□□ -1.73
HSE1	YHL002W	GPN2	Q08726	347 aa	Predicted RBP	4.25	□□□□□ -1.73
HSE1	YHL002W	MTF2	P10849	440 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
HSE1	YHL002W	RKM3	P38222	552 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	IFA38	P38286	347 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	SWP82	P43554	623 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	CTK2	P46962	323 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	YNL234W	P53857	426 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	ESBP6	P53918	673 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	BET4	Q00618	327 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	FCP1	Q03254	732 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	RSM28	Q03430	361 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	ECM16	Q04217	1267 aa	Known RBP	4.24	□□□□□ -1.73
HSE1	YHL002W	NRT1	Q08485	598 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	NDD1	Q08887	554 aa		4.24	□□□□□ -1.73
HSE1	YHL002W	RAP1	P11938	827 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	SAC1	P32368	623 aa	Known RBP	4.23	□□□□□ -1.73
HSE1	YHL002W	SRB5	P32585	307 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	XRS2	P33301	854 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	PTH2	P34222	208 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	ARP10	Q04549	284 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	FMP42	Q04991	504 aa		4.23	□□□□□ -1.73
HSE1	YHL002W	CSR1	Q06705	408 aa	Known RBP	4.23	□□□□□ -1.73
HSE1	YHL002W	CDC15	P27636	974 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	LEU5	P38702	357 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	ECM10	P39987	644 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	PFK26	P40433	827 aa	Known RBP	4.22	□□□□□ -1.73
HSE1	YHL002W	MAF1	P41910	395 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	PSP1	P50896	841 aa	Known RBP	4.22	□□□□□ -1.73
HSE1	YHL002W	YNL181W	P53878	407 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	YMR254C	Q04838	102 aa		4.22	□□□□□ -1.73
HSE1	YHL002W	GUK1	P15454	187 aa	Known RBP	4.21	□□□□□ -1.74
HSE1	YHL002W	RTT107	P38850	1070 aa		4.21	□□□□□ -1.74
HSE1	YHL002W	UME6	P39001	836 aa		4.21	□□□□□ -1.74
HSE1	YHL002W	RPN11	P43588	306 aa	Known RBP	4.21	□□□□□ -1.74
HSE1	YHL002W	TEF4	P36008	412 aa	Known RBP	4.2	□□□□□ -1.74
HSE1	YHL002W	IML2	P47031	731 aa		4.2	□□□□□ -1.74
HSE1	YHL002W	CTF18	P49956	741 aa		4.2	□□□□□ -1.74
HSE1	YHL002W	SGF73	P53165	657 aa		4.2	□□□□□ -1.74
HSE1	YHL002W	TAH18	Q12181	623 aa		4.2	□□□□□ -1.74
HSE1	YHL002W	YOR111W	Q99210	232 aa		4.2	□□□□□ -1.74
HSE1	YHL002W	RPB8	P20436	146 aa		4.19	□□□□□ -1.74
HSE1	YHL002W	YPK3	P38070	525 aa		4.19	□□□□□ -1.74
HSE1	YHL002W	YND1	P40009	630 aa		4.19	□□□□□ -1.74
HSE1	YHL002W	YJR008W	P47085	338 aa		4.19	□□□□□ -1.74
HSE1	YHL002W	APL5	Q08951	932 aa	Known RBP	4.19	□□□□□ -1.74
HSE1	YHL002W	KRS1	P15180	591 aa	Known RBP	4.18	□□□□□ -1.74
HSE1	YHL002W	ERG8	P24521	451 aa		4.18	□□□□□ -1.74
HSE1	YHL002W	PDR3	P33200	976 aa		4.18	□□□□□ -1.74
HSE1	YHL002W	ESL2	P36168	1195 aa		4.18	□□□□□ -1.74
HSE1	YHL002W	STV1	P37296	890 aa		4.18	□□□□□ -1.74
HSE1	YHL002W	RFC1	P38630	861 aa	Known RBP	4.18	□□□□□ -1.74
HSE1	YHL002W	BZZ1	P38822	633 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms