RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	TEF4	P36008	412 aa	Known RBP	4.03	□□□□□ -1.76
RSM27	YGR215W	NTR2	P36118	322 aa	Predicted RBP	4.03	□□□□□ -1.76
RSM27	YGR215W	PHM8	P40025	321 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	IST3	P40565	148 aa	Predicted RBP	4.03	□□□□□ -1.76
RSM27	YGR215W	SWP82	P43554	623 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	GTR1	Q00582	310 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	ATG16	Q03818	150 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	YLR455W	Q06188	304 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	GSH2	Q08220	491 aa		4.03	□□□□□ -1.76
RSM27	YGR215W	PET111	P08468	800 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	SRP54	P20424	541 aa	Known RBP	4.02	□□□□□ -1.77
RSM27	YGR215W	UME6	P39001	836 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	VRG4	P40107	337 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	PFK26	P40433	827 aa	Known RBP	4.02	□□□□□ -1.77
RSM27	YGR215W	CTF18	P49956	741 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	PSP1	P50896	841 aa	Known RBP	4.02	□□□□□ -1.77
RSM27	YGR215W	SCS3	P53012	380 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	BOP3	P53958	396 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	IZH1	Q03419	316 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	YMR034C	Q05131	434 aa	Predicted RBP	4.02	□□□□□ -1.77
RSM27	YGR215W	DSE3	Q08729	430 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	UBX3	Q12229	455 aa		4.02	□□□□□ -1.77
RSM27	YGR215W	SSM4	P40318	1319 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	CHO1	P08456	276 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	CNS1	P33313	385 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	SOF1	P33750	489 aa	Known RBP	4.01	□□□□□ -1.77
RSM27	YGR215W	PSD1	P39006	500 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	MRX1	P40050	688 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	IES5	P40060	125 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	BNA1	P47096	177 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	RTS3	P53289	263 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	EAF7	P53911	425 aa	Known RBP	4.01	□□□□□ -1.77
RSM27	YGR215W	TDA9	Q04545	1251 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	SWF1	Q04629	336 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	TFC6	Q06339	672 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	TRM8	Q12009	286 aa		4.01	□□□□□ -1.77
RSM27	YGR215W	ERG27	Q12452	347 aa	Known RBP	4.01	□□□□□ -1.77
RSM27	YGR215W	YLR302C	O13544	120 aa		4	□□□□□ -1.77
RSM27	YGR215W	SNF1	P06782	633 aa	Known RBP	4	□□□□□ -1.77
RSM27	YGR215W	SRB5	P32585	307 aa		4	□□□□□ -1.77
RSM27	YGR215W	XRS2	P33301	854 aa		4	□□□□□ -1.77
RSM27	YGR215W	TFC3	P34111	1160 aa		4	□□□□□ -1.77
RSM27	YGR215W	PSY4	P38193	441 aa		4	□□□□□ -1.77
RSM27	YGR215W	RSM28	Q03430	361 aa		4	□□□□□ -1.77
RSM27	YGR215W	YOR019W	Q99248	730 aa		4	□□□□□ -1.77
RSM27	YGR215W	ERG8	P24521	451 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	AAP1	P37898	856 aa	Known RBP	3.99	□□□□□ -1.77
RSM27	YGR215W	FUI1	P38196	639 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	ECM10	P39987	644 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	YIL152W	P40455	235 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	YFR020W	P43600	232 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	LSC1	P53598	329 aa	Known RBP	3.99	□□□□□ -1.77
RSM27	YGR215W	DIG1	Q03063	452 aa	Known RBP	3.99	□□□□□ -1.77
RSM27	YGR215W	VID22	Q05934	901 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	POS5	Q06892	414 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	MLH2	Q07980	695 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	VCX1	Q99385	411 aa		3.99	□□□□□ -1.77
RSM27	YGR215W	RAP1	P11938	827 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	GUK1	P15454	187 aa	Known RBP	3.98	□□□□□ -1.77
RSM27	YGR215W	TKL1	P23254	680 aa	Known RBP	3.98	□□□□□ -1.77
RSM27	YGR215W	YCR043C	P25361	127 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	SLC1	P33333	303 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	ARC40	P38328	384 aa	Known RBP	3.98	□□□□□ -1.77
RSM27	YGR215W	SEC31	P38968	1273 aa	Known RBP	3.98	□□□□□ -1.77
RSM27	YGR215W	RIC1	P40395	1056 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	CTK2	P46962	323 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	ASI1	P54074	624 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	CAC2	Q04199	468 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	VMS1	Q04311	632 aa	Known RBP	3.98	□□□□□ -1.77
RSM27	YGR215W	BUD7	Q08754	746 aa		3.98	□□□□□ -1.77
RSM27	YGR215W	CBP1	P07252	654 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	STE50	P25344	346 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	VPS24	P36095	224 aa	Known RBP	3.97	□□□□□ -1.77
RSM27	YGR215W	MNN2	P38069	597 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	IML2	P47031	731 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	SGF73	P53165	657 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	YGR021W	P53212	290 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	YTP1	P53584	459 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	SRL1	Q08673	210 aa		3.97	□□□□□ -1.77
RSM27	YGR215W	GPN2	Q08726	347 aa	Predicted RBP	3.97	□□□□□ -1.77
RSM27	YGR215W	ESL2	P36168	1195 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	KTR3	P38130	404 aa	Predicted RBP	3.96	□□□□□ -1.78
RSM27	YGR215W	RFC1	P38630	861 aa	Known RBP	3.96	□□□□□ -1.78
RSM27	YGR215W	AXL2	P38928	823 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	YIL169C	P40442	995 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	YNR061C	P53747	219 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	YNL234W	P53857	426 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	NUP53	Q03790	475 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	UTP21	Q06078	939 aa	Predicted RBP	3.96	□□□□□ -1.78
RSM27	YGR215W	PSR2	Q07949	397 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	PSK2	Q08217	1101 aa		3.96	□□□□□ -1.78
RSM27	YGR215W	PWP2	P25635	923 aa	Known RBP	3.95	□□□□□ -1.78
RSM27	YGR215W	CDC15	P27636	974 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	STV1	P37296	890 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	MET30	P39014	640 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	TES1	P41903	349 aa	Known RBP	3.95	□□□□□ -1.78
RSM27	YGR215W	MEP2	P41948	499 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	NNF2	P53253	936 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	ESBP6	P53918	673 aa		3.95	□□□□□ -1.78
RSM27	YGR215W	ECM16	Q04217	1267 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms