RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C YPT6Q99260 215 aa2.25□□□□□ -2.05
UBR1YGR184C YRF1-4O13559 1382 aa2.25□□□□□ -2.05
UBR1YGR184C SAC3P46674 1301 aa2.24□□□□□ -2.05
UBR1YGR184C RPS9BP05755 195 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C SPS4P09937 338 aa2.24□□□□□ -2.05
UBR1YGR184C URK1P27515 501 aa2.24□□□□□ -2.05
UBR1YGR184C PEP3P27801 918 aa2.24□□□□□ -2.05
UBR1YGR184C ALY1P36117 915 aa2.24□□□□□ -2.05
UBR1YGR184C NUP84P52891 726 aa2.24□□□□□ -2.05
UBR1YGR184C MRD1Q06106 887 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C CUE5Q08412 411 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C RRP36Q12481 300 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C MET17P06106 444 aa2.24□□□□□ -2.05
UBR1YGR184C OM45P16547 393 aa2.24□□□□□ -2.05
UBR1YGR184C NTG1P31378 399 aa2.24□□□□□ -2.05
UBR1YGR184C WSS1P38838 269 aa2.24□□□□□ -2.05
UBR1YGR184C COG1P53079 417 aa2.24□□□□□ -2.05
UBR1YGR184C MNP1P53163 194 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C SGF73P53165 657 aa2.24□□□□□ -2.05
UBR1YGR184C VPS62P53285 467 aa2.24□□□□□ -2.05
UBR1YGR184C COP1P53622 1201 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C REG1Q00816 1014 aa2.24□□□□□ -2.05
UBR1YGR184C SSL1Q04673 461 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C TGS1Q12052 315 aa2.24□□□□□ -2.05
UBR1YGR184C YCK1P23291 538 aa2.24□□□□□ -2.05
UBR1YGR184C IDH2P28241 369 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C TFB1P32776 642 aa2.24□□□□□ -2.05
UBR1YGR184C SAF1P38352 637 aa2.24□□□□□ -2.05
UBR1YGR184C SAK1P38990 1142 aa2.24□□□□□ -2.05
UBR1YGR184C MRX1P40050 688 aa2.24□□□□□ -2.05
UBR1YGR184C YIR007WP40566 764 aa2.24□□□□□ -2.05
UBR1YGR184C TCB2P48231 1178 aa2.24□□□□□ -2.05
UBR1YGR184C BRO1P48582 844 aa2.24□□□□□ -2.05
UBR1YGR184C RPN14P53196 417 aa2.24□□□□□ -2.05
UBR1YGR184C SNO2P53823 222 aa2.24□□□□□ -2.05
UBR1YGR184C YPL107WQ02873 248 aa2.24□□□□□ -2.05
UBR1YGR184C ARG7Q04728 441 aa2.24□□□□□ -2.05
UBR1YGR184C YLR455WQ06188 304 aa2.24□□□□□ -2.05
UBR1YGR184C HBT1Q07653 1046 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C HIS4P00815 799 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C SIR3P06701 978 aa2.24□□□□□ -2.05
UBR1YGR184C RHO2P06781 192 aa2.24□□□□□ -2.05
UBR1YGR184C ILV2P07342 687 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C RIB7P33312 244 aa2.24□□□□□ -2.05
UBR1YGR184C SDH8P38345 138 aa2.24□□□□□ -2.05
UBR1YGR184C YMR124WP39523 943 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C LYS14P40971 790 aa2.24□□□□□ -2.05
UBR1YGR184C LOH1P47055 219 aa2.24□□□□□ -2.05
UBR1YGR184C COS5P47187 383 aa2.24□□□□□ -2.05
UBR1YGR184C YDL183CP48569 320 aa2.24□□□□□ -2.05
UBR1YGR184C EFR3Q03653 782 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C COS7Q07788 383 aa2.24□□□□□ -2.05
UBR1YGR184C YPL216WQ08964 1102 aa2.24□□□□□ -2.05
UBR1YGR184C SSN2P38931 1420 aa2.24□□□□□ -2.05
UBR1YGR184C ERG8P24521 451 aa2.24□□□□□ -2.05
UBR1YGR184C POT1P27796 417 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
UBR1YGR184C SEF1P34228 1148 aa2.24□□□□□ -2.05
UBR1YGR184C HES1P35843 434 aa2.24□□□□□ -2.05
UBR1YGR184C AUR1P36107 401 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C LAS1P36146 502 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C SIF2P38262 535 aa2.24□□□□□ -2.05
UBR1YGR184C HSM3P38348 480 aa2.24□□□□□ -2.05
UBR1YGR184C OPT1P40897 799 aa2.24□□□□□ -2.05
UBR1YGR184C IME4P41833 600 aa2.24□□□□□ -2.05
UBR1YGR184C BPL1P48445 690 aaPredicted RBP2.24□□□□□ -2.05
UBR1YGR184C BUD9P53226 547 aa2.24□□□□□ -2.05
UBR1YGR184C YGR130CP53278 816 aa2.24□□□□□ -2.05
UBR1YGR184C VPS38Q05919 439 aa2.24□□□□□ -2.05
UBR1YGR184C SLK19Q08581 821 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C FRE3Q08905 711 aa2.24□□□□□ -2.05
UBR1YGR184C CHS5Q12114 671 aaKnown RBP2.24□□□□□ -2.05
UBR1YGR184C PAN1P32521 1480 aa2.23□□□□□ -2.05
UBR1YGR184C MSS116P15424 664 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C KAR3P17119 729 aa2.23□□□□□ -2.05
UBR1YGR184C GLK1P17709 500 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C SPE2P21182 396 aa2.23□□□□□ -2.05
UBR1YGR184C RRP7P25368 297 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C REC114P32841 428 aa2.23□□□□□ -2.05
UBR1YGR184C MRPL40P36534 297 aa2.23□□□□□ -2.05
UBR1YGR184C ATP3P38077 311 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C TAT1P38085 619 aa2.23□□□□□ -2.05
UBR1YGR184C COS111P38308 924 aa2.23□□□□□ -2.05
UBR1YGR184C PEX18P38855 283 aa2.23□□□□□ -2.05
UBR1YGR184C YTA12P40341 825 aa2.23□□□□□ -2.05
UBR1YGR184C ASG1P40467 964 aa2.23□□□□□ -2.05
UBR1YGR184C ULP2P40537 1034 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C LSB3P43603 459 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C RCL1Q08096 367 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C RNR1P21524 888 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C SLN1P39928 1220 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C NCS6P53088 359 aa2.23□□□□□ -2.05
UBR1YGR184C RAD30Q04049 632 aa2.23□□□□□ -2.05
UBR1YGR184C YOR352WQ08816 343 aa2.23□□□□□ -2.05
UBR1YGR184C LEA1Q08963 238 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C CFT2Q12102 859 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C BUG1Q12191 341 aa2.23□□□□□ -2.05
UBR1YGR184C NFI1Q12216 726 aa2.23□□□□□ -2.05
UBR1YGR184C RIB2Q12362 591 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C CAF20P12962 161 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C HOM2P13663 365 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms