RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	YOR093C	Q12275	1648 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	ADE3	P07245	946 aa	Known RBP	0.76	□□□□□ -2.29
NNF2	YGR089W	GUK1	P15454	187 aa	Known RBP	0.76	□□□□□ -2.29
NNF2	YGR089W	PDA1	P16387	420 aa	Known RBP	0.76	□□□□□ -2.29
NNF2	YGR089W	CDC23	P16522	626 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	RIT1	P23796	513 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	YSP3	P25036	478 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	LDB16	P25587	256 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	PHM8	P40025	321 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	YPL108W	Q02872	168 aa	Predicted RBP	0.76	□□□□□ -2.29
NNF2	YGR089W	SWF1	Q04629	336 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	EIS1	Q05050	843 aa	Known RBP	0.76	□□□□□ -2.29
NNF2	YGR089W	YOL114C	Q12322	202 aa		0.76	□□□□□ -2.29
NNF2	YGR089W	SUI3	P09064	285 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	YML003W	P0CF16	290 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	RFA2	P26754	273 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	SEC1	P30619	724 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	ADE17	P38009	592 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	IML2	P47031	731 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	YGL242C	P53066	181 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	ASI1	P54074	624 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	MOT3	P54785	490 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	YDR415C	Q04033	374 aa	Predicted RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	YMR254C	Q04838	102 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	STP3	Q05937	343 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	YLR455W	Q06188	304 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	BRE1	Q07457	700 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	BAG7	Q12128	409 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	MPD2	Q99316	277 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	CBP1	P07252	654 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	CHO1	P08456	276 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	PET122	P10355	254 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	MRP2	P10663	115 aa	Predicted RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	BIK1	P11709	440 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	POL3	P15436	1097 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	HNM1	P19807	563 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	STE50	P25344	346 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	ARP2	P32381	391 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	RPN2	P32565	945 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	GEX2	P36173	615 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	APM3	P38153	483 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	SPC72	P39723	622 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	ATG27	P46989	271 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	IMA1	P53051	589 aa		0.75	□□□□□ -2.29
NNF2	YGR089W	MTG1	Q03151	367 aa	Predicted RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	IWR1	Q07532	353 aa	Predicted RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	MYO2	P19524	1574 aa	Known RBP	0.75	□□□□□ -2.29
NNF2	YGR089W	SSB1	P11484	613 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	SST2	P11972	698 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	MGR1	P25573	417 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	LRE1	P25579	583 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	RAD24	P32641	659 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	UBP13	P38187	747 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YBR138C	P38277	524 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	SSB2	P40150	613 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	DJP1	P40564	432 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	CPR6	P53691	371 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	TEP1	P53916	434 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	SMA1	Q02651	245 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	ATG21	Q02887	496 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YLR049C	Q12110	428 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YBR298C-A	Q8TGK4	73 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	INO80	P53115	1489 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PIF1	P07271	859 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PET111	P08468	800 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	BAR1	P12630	587 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	SRP54	P20424	541 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	MSH1	P25846	959 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YHR218W	P38899	603 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	HXT9	P40885	567 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PEX8	P53248	589 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YNL234W	P53857	426 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YNL181W	P53878	407 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	MAK10	Q02197	733 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PAL1	Q05518	499 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	UTP21	Q06078	939 aa	Predicted RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	ATG23	Q06671	453 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	BSC1	Q12140	328 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	MSS18	P08593	268 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PDR3	P33200	976 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	YPK3	P38070	525 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	FSH1	P38777	243 aa	Known RBP	0.74	□□□□□ -2.29
NNF2	YGR089W	ERR3	P42222	437 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	SGF73	P53165	657 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	MET14	Q02196	202 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	PFA5	Q03289	374 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	EKI1	Q03764	534 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	MCP2	Q06567	569 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	HIM1	Q06674	414 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	SWA2	Q06677	668 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	VAM6	Q07468	1049 aa		0.74	□□□□□ -2.29
NNF2	YGR089W	EDE1	P34216	1381 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	GAL1	P04385	528 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	TKL1	P23254	680 aa	Known RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	GCD7	P32502	381 aa	Predicted RBP	0.73	□□□□□ -2.29
NNF2	YGR089W	SRO77	P38163	1010 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	AVT5	P38176	459 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	KRE9	P39005	276 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	SIM1	P40472	476 aa		0.73	□□□□□ -2.29
NNF2	YGR089W	RTS2	P40962	232 aa		0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 85.3 ms