RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	PWP2	P25635	923 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	LAC1	P28496	418 aa		2.3	□□□□□ -2.04
DOT6	YER088C	FUI1	P38196	639 aa		2.3	□□□□□ -2.04
DOT6	YER088C	PHM8	P40025	321 aa		2.3	□□□□□ -2.04
DOT6	YER088C	SNO3	P43544	222 aa		2.3	□□□□□ -2.04
DOT6	YER088C	IRC7	P43623	340 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YRB30	P53107	440 aa	Predicted RBP	2.3	□□□□□ -2.04
DOT6	YER088C	EAF7	P53911	425 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	YNL058C	P53947	316 aa		2.3	□□□□□ -2.04
DOT6	YER088C	MTG1	Q03151	367 aa	Predicted RBP	2.3	□□□□□ -2.04
DOT6	YER088C	SNU56	Q03782	492 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	LEA1	Q08963	238 aa	Predicted RBP	2.3	□□□□□ -2.04
DOT6	YER088C	GET3	Q12154	354 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	URB1	P34241	1764 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	BI2	P03873	423 aa		2.29	□□□□□ -2.04
DOT6	YER088C	SRP54	P20424	541 aa	Known RBP	2.29	□□□□□ -2.04
DOT6	YER088C	RFA2	P26754	273 aa	Known RBP	2.29	□□□□□ -2.04
DOT6	YER088C	SIP1	P32578	815 aa		2.29	□□□□□ -2.04
DOT6	YER088C	ATG23	Q06671	453 aa		2.29	□□□□□ -2.04
DOT6	YER088C	BAG7	Q12128	409 aa		2.29	□□□□□ -2.04
DOT6	YER088C	KRE5	P22023	1365 aa		2.29	□□□□□ -2.04
DOT6	YER088C	URE2	P23202	354 aa	Known RBP	2.29	□□□□□ -2.04
DOT6	YER088C	SAP185	P40856	1058 aa		2.29	□□□□□ -2.04
DOT6	YER088C	PSA1	P41940	361 aa	Known RBP	2.29	□□□□□ -2.04
DOT6	YER088C	YJL107C	P42947	387 aa		2.29	□□□□□ -2.04
DOT6	YER088C	NET1	P47035	1189 aa		2.29	□□□□□ -2.04
DOT6	YER088C	ZAP1	P47043	880 aa		2.29	□□□□□ -2.04
DOT6	YER088C	CTF18	P49956	741 aa		2.29	□□□□□ -2.04
DOT6	YER088C	YGR021W	P53212	290 aa		2.29	□□□□□ -2.04
DOT6	YER088C	RTS3	P53289	263 aa		2.29	□□□□□ -2.04
DOT6	YER088C	YNR061C	P53747	219 aa		2.29	□□□□□ -2.04
DOT6	YER088C	MRPL13	Q02204	264 aa		2.29	□□□□□ -2.04
DOT6	YER088C	YPL071C	Q02864	156 aa		2.29	□□□□□ -2.04
DOT6	YER088C	ATG16	Q03818	150 aa		2.29	□□□□□ -2.04
DOT6	YER088C	BLS1	Q06071	122 aa		2.29	□□□□□ -2.04
DOT6	YER088C	FKS3	Q04952	1785 aa		2.28	□□□□□ -2.04
DOT6	YER088C	COQ3	P27680	312 aa		2.28	□□□□□ -2.04
DOT6	YER088C	VPS41	P38959	992 aa		2.28	□□□□□ -2.04
DOT6	YER088C	TPA1	P40032	644 aa	Known RBP	2.28	□□□□□ -2.04
DOT6	YER088C	CFD1	P40558	293 aa		2.28	□□□□□ -2.04
DOT6	YER088C	DJP1	P40564	432 aa		2.28	□□□□□ -2.04
DOT6	YER088C	PSP1	P50896	841 aa	Known RBP	2.28	□□□□□ -2.04
DOT6	YER088C	RPL15B	P54780	204 aa	Predicted RBP	2.28	□□□□□ -2.04
DOT6	YER088C	ORM2	Q06144	216 aa		2.28	□□□□□ -2.04
DOT6	YER088C	PFA4	Q12006	378 aa		2.28	□□□□□ -2.04
DOT6	YER088C	TRM8	Q12009	286 aa		2.28	□□□□□ -2.04
DOT6	YER088C	CRC1	Q12289	327 aa		2.28	□□□□□ -2.04
DOT6	YER088C	YRF1-3	P0CX14	1859 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YRF1-7	P0CX15	1859 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YRF1-6	P53819	1859 aa		2.27	□□□□□ -2.05
DOT6	YER088C	SNF1	P06782	633 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-LR1	P0C2J4	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-F	P0CX61	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-GR2	P0CX62	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YAP1	P19880	650 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-C	P25383	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	SWC3	P31376	625 aa		2.27	□□□□□ -2.05
DOT6	YER088C	XRS2	P33301	854 aa		2.27	□□□□□ -2.05
DOT6	YER088C	FUN12	P39730	1002 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	PSF2	P40359	213 aa		2.27	□□□□□ -2.05
DOT6	YER088C	COP1	P53622	1201 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	ADE16	P54113	591 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	ERG13	P54839	491 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-DR2	Q03483	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YDR109C	Q04585	715 aa		2.27	□□□□□ -2.05
DOT6	YER088C	GEP3	Q08622	556 aa		2.27	□□□□□ -2.05
DOT6	YER088C	SWT1	Q12104	458 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-B	Q12260	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	COX17	Q12287	69 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-OR2	Q12293	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-DR1	Q12392	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-OR1	Q12439	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY2A-DR3	Q99303	438 aa		2.27	□□□□□ -2.05
DOT6	YER088C	ATP2	P00830	511 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	NUC1	P08466	329 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YCP4	P25349	247 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	PTH2	P34222	208 aa		2.27	□□□□□ -2.05
DOT6	YER088C	ARN1	P38731	627 aa		2.27	□□□□□ -2.05
DOT6	YER088C	YIL024C	P40543	189 aa		2.27	□□□□□ -2.05
DOT6	YER088C	SKP2	P42843	763 aa		2.27	□□□□□ -2.05
DOT6	YER088C	SWP82	P43554	623 aa		2.27	□□□□□ -2.05
DOT6	YER088C	COG1	P53079	417 aa		2.27	□□□□□ -2.05
DOT6	YER088C	PIG1	Q06216	648 aa		2.27	□□□□□ -2.05
DOT6	YER088C	CSR1	Q06705	408 aa	Known RBP	2.27	□□□□□ -2.05
DOT6	YER088C	THI3	Q07471	609 aa		2.27	□□□□□ -2.05
DOT6	YER088C	PSR2	Q07949	397 aa		2.27	□□□□□ -2.05
DOT6	YER088C	AFT2	Q08957	416 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY4B-H	P0C2J7	1802 aa		2.27	□□□□□ -2.05
DOT6	YER088C	TY4B-J	P47024	1803 aa		2.27	□□□□□ -2.05
DOT6	YER088C	ILV2	P07342	687 aa	Known RBP	2.26	□□□□□ -2.05
DOT6	YER088C	PTP1	P25044	335 aa		2.26	□□□□□ -2.05
DOT6	YER088C	PSY4	P38193	441 aa		2.26	□□□□□ -2.05
DOT6	YER088C	PSD1	P39006	500 aa		2.26	□□□□□ -2.05
DOT6	YER088C	SMK1	P41808	388 aa		2.26	□□□□□ -2.05
DOT6	YER088C	ORC5	P50874	479 aa		2.26	□□□□□ -2.05
DOT6	YER088C	GTR1	Q00582	310 aa		2.26	□□□□□ -2.05
DOT6	YER088C	STP1	Q00947	519 aa		2.26	□□□□□ -2.05
DOT6	YER088C	VID22	Q05934	901 aa		2.26	□□□□□ -2.05
DOT6	YER088C	CIR2	Q08822	631 aa		2.26	□□□□□ -2.05
DOT6	YER088C	YOR389W	Q08912	624 aa		2.26	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms