RNA–Protein interactions for RNA: YDR322C-A

TIM11, Transcript of Subunit e of mitochondrial F1F0-ATPase, yeastyeast

Gene TIM11, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM11YDR322C-A SIR3P06701 978 aa2.8□□□□□ -1.96
TIM11YDR322C-A RPC40P07703 335 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A APE1P14904 514 aa2.8□□□□□ -1.96
TIM11YDR322C-A GLK1P17709 500 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A CPR2P23285 205 aa2.8□□□□□ -1.96
TIM11YDR322C-A VMA16P23968 213 aa2.8□□□□□ -1.96
TIM11YDR322C-A SPB1P25582 841 aaPredicted RBP2.8□□□□□ -1.96
TIM11YDR322C-A URK1P27515 501 aa2.8□□□□□ -1.96
TIM11YDR322C-A CMC1P36064 111 aa2.8□□□□□ -1.96
TIM11YDR322C-A UIP5P36137 443 aa2.8□□□□□ -1.96
TIM11YDR322C-A SDH8P38345 138 aa2.8□□□□□ -1.96
TIM11YDR322C-A FMP52P40008 231 aa2.8□□□□□ -1.96
TIM11YDR322C-A CCT7P42943 550 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A YFR016CP43597 1233 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A MPS3P47069 682 aa2.8□□□□□ -1.96
TIM11YDR322C-A STR3P53101 465 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A PRP43P53131 767 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A BNI5P53890 448 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A YPL107WQ02873 248 aa2.8□□□□□ -1.96
TIM11YDR322C-A YDR239CQ03780 787 aa2.8□□□□□ -1.96
TIM11YDR322C-A YMR111CQ04461 462 aaPredicted RBP2.8□□□□□ -1.96
TIM11YDR322C-A RSF1Q05043 376 aa2.8□□□□□ -1.96
TIM11YDR322C-A RQC1Q05468 723 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A VPS38Q05919 439 aa2.8□□□□□ -1.96
TIM11YDR322C-A YSH1Q06224 779 aaPredicted RBP2.8□□□□□ -1.96
TIM11YDR322C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
TIM11YDR322C-A RLP24Q07915 199 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A IZH3Q07959 543 aa2.8□□□□□ -1.96
TIM11YDR322C-A BUD7Q08754 746 aa2.8□□□□□ -1.96
TIM11YDR322C-A FMP40Q08968 688 aaPredicted RBP2.8□□□□□ -1.96
TIM11YDR322C-A APL4Q12028 832 aa2.8□□□□□ -1.96
TIM11YDR322C-A SPE3Q12074 293 aaKnown RBP2.8□□□□□ -1.96
TIM11YDR322C-A AVL9Q12500 764 aa2.8□□□□□ -1.96
TIM11YDR322C-A SKS1Q12505 502 aa2.8□□□□□ -1.96
TIM11YDR322C-A CTF3Q12748 733 aa2.8□□□□□ -1.96
TIM11YDR322C-A YBR255C-AQ3E776 120 aa2.8□□□□□ -1.96
TIM11YDR322C-A YER175W-AQ8TGU4 54 aa2.8□□□□□ -1.96
TIM11YDR322C-A AFI1Q99222 893 aa2.8□□□□□ -1.96
TIM11YDR322C-A YPT6Q99260 215 aa2.8□□□□□ -1.96
TIM11YDR322C-A PHO84P25297 587 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A RRP7P25368 297 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A MSP1P28737 362 aa2.79□□□□□ -1.96
TIM11YDR322C-A SYN8P31377 255 aa2.79□□□□□ -1.96
TIM11YDR322C-A PDB1P32473 366 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A MSS1P32559 526 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A SIP1P32578 815 aa2.79□□□□□ -1.96
TIM11YDR322C-A NIP100P33420 868 aa2.79□□□□□ -1.96
TIM11YDR322C-A SEF1P34228 1148 aa2.79□□□□□ -1.96
TIM11YDR322C-A LOT5P34234 306 aa2.79□□□□□ -1.96
TIM11YDR322C-A LST4P34239 828 aa2.79□□□□□ -1.96
TIM11YDR322C-A LAS1P36146 502 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A DAD2P36162 133 aa2.79□□□□□ -1.96
TIM11YDR322C-A MRPL7P36519 292 aa2.79□□□□□ -1.96
TIM11YDR322C-A GDT1P38301 280 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A RRF1P38771 230 aa2.79□□□□□ -1.96
TIM11YDR322C-A YHR054CP38780 354 aa2.79□□□□□ -1.96
TIM11YDR322C-A YNG2P38806 282 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A FUN12P39730 1002 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A PCL7P40186 285 aa2.79□□□□□ -1.96
TIM11YDR322C-A PKP1P40530 394 aa2.79□□□□□ -1.96
TIM11YDR322C-A CAK1P43568 368 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A YJL163CP46996 555 aa2.79□□□□□ -1.96
TIM11YDR322C-A CTR1P49573 406 aa2.79□□□□□ -1.96
TIM11YDR322C-A MNN10P50108 393 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A PAN2P53010 1115 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A LCL3P53153 274 aa2.79□□□□□ -1.96
TIM11YDR322C-A MNP1P53163 194 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A TWF1P53250 332 aa2.79□□□□□ -1.96
TIM11YDR322C-A FHN1P53279 174 aa2.79□□□□□ -1.96
TIM11YDR322C-A HST1P53685 503 aa2.79□□□□□ -1.96
TIM11YDR322C-A RIA1P53893 1110 aa2.79□□□□□ -1.96
TIM11YDR322C-A DAK1P54838 584 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A KAP120Q02932 1032 aa2.79□□□□□ -1.96
TIM11YDR322C-A EFR3Q03653 782 aaKnown RBP2.79□□□□□ -1.96
TIM11YDR322C-A USA1Q03714 838 aa2.79□□□□□ -1.96
TIM11YDR322C-A ARG7Q04728 441 aa2.79□□□□□ -1.96
TIM11YDR322C-A ROY1Q04847 553 aa2.79□□□□□ -1.96
TIM11YDR322C-A VTA1Q06263 330 aa2.79□□□□□ -1.96
TIM11YDR322C-A YDL073WQ07454 984 aa2.79□□□□□ -1.96
TIM11YDR322C-A REX3Q12090 404 aa2.79□□□□□ -1.96
TIM11YDR322C-A CFT2Q12102 859 aaPredicted RBP2.79□□□□□ -1.96
TIM11YDR322C-A GPM3Q12326 303 aa2.79□□□□□ -1.96
TIM11YDR322C-A YML133CQ03099 1374 aa2.78□□□□□ -1.96
TIM11YDR322C-A YLL067CQ07888 1374 aa2.78□□□□□ -1.96
TIM11YDR322C-A YLL066CQ99208 1374 aa2.78□□□□□ -1.96
TIM11YDR322C-A YLR358CO13565 187 aa2.78□□□□□ -1.96
TIM11YDR322C-A GAL80P04387 435 aa2.78□□□□□ -1.96
TIM11YDR322C-A RPL6BP05739 176 aaKnown RBP2.78□□□□□ -1.96
TIM11YDR322C-A EST1P17214 699 aaPredicted RBP2.78□□□□□ -1.96
TIM11YDR322C-A THR1P17423 357 aaKnown RBP2.78□□□□□ -1.96
TIM11YDR322C-A KGD2P19262 463 aaPredicted RBP2.78□□□□□ -1.96
TIM11YDR322C-A APN1P22936 367 aa2.78□□□□□ -1.96
TIM11YDR322C-A FUB1P25659 250 aa2.78□□□□□ -1.96
TIM11YDR322C-A URA7P28274 579 aaKnown RBP2.78□□□□□ -1.96
TIM11YDR322C-A LTV1P34078 463 aa2.78□□□□□ -1.96
TIM11YDR322C-A TSA1P34760 196 aaKnown RBP2.78□□□□□ -1.96
TIM11YDR322C-A PHO11P35842 467 aa2.78□□□□□ -1.96
TIM11YDR322C-A APL3P38065 1025 aa2.78□□□□□ -1.96
TIM11YDR322C-A PHO12P38693 467 aa2.78□□□□□ -1.96
TIM11YDR322C-A BUD16P39988 312 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms