RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YME2P32843 850 aa2.28□□□□□ -2.04
SSD1YDR293C STE13P33894 931 aa2.28□□□□□ -2.04
SSD1YDR293C STB6P36085 766 aa2.28□□□□□ -2.04
SSD1YDR293C MSG5P38590 489 aa2.28□□□□□ -2.04
SSD1YDR293C LAM1P38851 1228 aa2.28□□□□□ -2.04
SSD1YDR293C KEL1P38853 1164 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C OAF1P39720 1047 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C UBP5P39944 805 aa2.28□□□□□ -2.04
SSD1YDR293C TED1P40533 473 aa2.28□□□□□ -2.04
SSD1YDR293C LAM5P43560 674 aa2.28□□□□□ -2.04
SSD1YDR293C HSH155P49955 971 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C YGL036WP53185 909 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C TAM41P53230 385 aa2.28□□□□□ -2.04
SSD1YDR293C COX18P53239 316 aa2.28□□□□□ -2.04
SSD1YDR293C TRM44Q02648 567 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C MZM1Q03429 123 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C BCP1Q06338 283 aa2.28□□□□□ -2.04
SSD1YDR293C SIL1Q08199 421 aa2.28□□□□□ -2.04
SSD1YDR293C SNX3Q08826 162 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C THI21Q08975 551 aa2.28□□□□□ -2.04
SSD1YDR293C TGL5Q12043 749 aa2.28□□□□□ -2.04
SSD1YDR293C DBP10Q12389 995 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C CMR1Q12510 522 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C FKS1P38631 1876 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C ADE8P04161 214 aa2.28□□□□□ -2.05
SSD1YDR293C RPB4P20433 221 aaPredicted RBP2.28□□□□□ -2.05
SSD1YDR293C NPP1P25353 742 aa2.28□□□□□ -2.05
SSD1YDR293C CAP1P28495 268 aaKnown RBP2.28□□□□□ -2.05
SSD1YDR293C URA10P30402 227 aa2.28□□□□□ -2.05
SSD1YDR293C MSS51P32335 436 aa2.28□□□□□ -2.05
SSD1YDR293C TMT1P32643 299 aa2.28□□□□□ -2.05
SSD1YDR293C HSP78P33416 811 aa2.28□□□□□ -2.05
SSD1YDR293C YBR241CP38142 488 aa2.28□□□□□ -2.05
SSD1YDR293C UTP9P38882 575 aaKnown RBP2.28□□□□□ -2.05
SSD1YDR293C ECM1P39715 212 aa2.28□□□□□ -2.05
SSD1YDR293C ALD5P40047 520 aaKnown RBP2.28□□□□□ -2.05
SSD1YDR293C GYP8P43570 497 aa2.28□□□□□ -2.05
SSD1YDR293C TAF1P46677 1066 aa2.28□□□□□ -2.05
SSD1YDR293C LSC2P53312 427 aa2.28□□□□□ -2.05
SSD1YDR293C COS6P53344 381 aa2.28□□□□□ -2.05
SSD1YDR293C GOR1P53839 350 aa2.28□□□□□ -2.05
SSD1YDR293C GPD1Q00055 391 aaKnown RBP2.28□□□□□ -2.05
SSD1YDR293C TVP15Q03860 143 aa2.28□□□□□ -2.05
SSD1YDR293C YLR177WQ06251 628 aa2.28□□□□□ -2.05
SSD1YDR293C RGA2Q06407 1009 aa2.28□□□□□ -2.05
SSD1YDR293C AAD4Q07747 329 aa2.28□□□□□ -2.05
SSD1YDR293C TRE1Q08919 783 aa2.28□□□□□ -2.05
SSD1YDR293C YPL216WQ08964 1102 aa2.28□□□□□ -2.05
SSD1YDR293C AHA1Q12449 350 aaKnown RBP2.28□□□□□ -2.05
SSD1YDR293C RAS1P01119 309 aa2.27□□□□□ -2.05
SSD1YDR293C ASP3-2P0CX77 362 aa2.27□□□□□ -2.05
SSD1YDR293C ASP3-3P0CX78 362 aa2.27□□□□□ -2.05
SSD1YDR293C ASP3-4P0CX79 362 aa2.27□□□□□ -2.05
SSD1YDR293C ASP3-1P0CZ17 362 aa2.27□□□□□ -2.05
SSD1YDR293C NMT1P14743 455 aa2.27□□□□□ -2.05
SSD1YDR293C TRX1P22217 103 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C EFB1P32471 206 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C MRP4P32902 394 aa2.27□□□□□ -2.05
SSD1YDR293C RPC25P35718 212 aa2.27□□□□□ -2.05
SSD1YDR293C MED8P38304 223 aa2.27□□□□□ -2.05
SSD1YDR293C NEM1P38757 446 aa2.27□□□□□ -2.05
SSD1YDR293C STN1P38960 494 aa2.27□□□□□ -2.05
SSD1YDR293C DSE1P40077 573 aa2.27□□□□□ -2.05
SSD1YDR293C SBE2P42223 864 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C YNL320WP42840 284 aa2.27□□□□□ -2.05
SSD1YDR293C AAD14P42884 376 aa2.27□□□□□ -2.05
SSD1YDR293C FMP33P46998 180 aa2.27□□□□□ -2.05
SSD1YDR293C YGR250CP53316 781 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C PXR1P53335 271 aaPredicted RBP2.27□□□□□ -2.05
SSD1YDR293C HDA1P53973 706 aa2.27□□□□□ -2.05
SSD1YDR293C BLS1Q06071 122 aa2.27□□□□□ -2.05
SSD1YDR293C RSC3Q06639 885 aa2.27□□□□□ -2.05
SSD1YDR293C YDR056CQ12025 205 aa2.27□□□□□ -2.05
SSD1YDR293C YOR022CQ12204 715 aa2.27□□□□□ -2.05
SSD1YDR293C MDM35O60200 86 aa2.27□□□□□ -2.05
SSD1YDR293C RPS31P05759 152 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C HAP2P06774 265 aa2.27□□□□□ -2.05
SSD1YDR293C RPS21AP0C0V8 87 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C CDC42P19073 191 aa2.27□□□□□ -2.05
SSD1YDR293C AAT2P23542 418 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C MIH1P23748 554 aa2.27□□□□□ -2.05
SSD1YDR293C PHA2P32452 334 aa2.27□□□□□ -2.05
SSD1YDR293C APE2P32454 952 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C ECM32P32644 1121 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C UBP11P36026 717 aa2.27□□□□□ -2.05
SSD1YDR293C CUE2P36075 443 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C ARN1P38731 627 aa2.27□□□□□ -2.05
SSD1YDR293C AIM18P38884 321 aa2.27□□□□□ -2.05
SSD1YDR293C YJR061WP40355 935 aa2.27□□□□□ -2.05
SSD1YDR293C IST3P40565 148 aaPredicted RBP2.27□□□□□ -2.05
SSD1YDR293C GCN20P43535 752 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C UBP6P43593 499 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C MET12P46151 657 aa2.27□□□□□ -2.05
SSD1YDR293C YJR098CP47139 656 aa2.27□□□□□ -2.05
SSD1YDR293C YJR124CP47159 448 aa2.27□□□□□ -2.05
SSD1YDR293C IMA1P53051 589 aa2.27□□□□□ -2.05
SSD1YDR293C RIM8P53179 542 aa2.27□□□□□ -2.05
SSD1YDR293C YNL134CP53912 376 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C YNL040WP53960 456 aaPredicted RBP2.27□□□□□ -2.05
SSD1YDR293C KIN4Q01919 800 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms