RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W COG1P53079 417 aa5.83□□□□□ -1.48
VMS1YDR049W LRS4Q04087 347 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W CSI1Q04368 295 aa5.83□□□□□ -1.48
VMS1YDR049W ATG26Q06321 1198 aa5.83□□□□□ -1.48
VMS1YDR049W CUR1Q06469 252 aa5.83□□□□□ -1.48
VMS1YDR049W THI22Q06490 572 aa5.83□□□□□ -1.48
VMS1YDR049W GSH2Q08220 491 aa5.83□□□□□ -1.48
VMS1YDR049W YOR059CQ08448 450 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W YOR389WQ08912 624 aa5.83□□□□□ -1.48
VMS1YDR049W LSP1Q12230 341 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W PTC5Q12511 572 aa5.83□□□□□ -1.48
VMS1YDR049W Q0142Q9ZZW4 58 aa5.83□□□□□ -1.48
VMS1YDR049W ARG81P05085 880 aa5.83□□□□□ -1.48
VMS1YDR049W STE3P06783 470 aa5.83□□□□□ -1.48
VMS1YDR049W HTS1P07263 546 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W PCK1P10963 549 aa5.83□□□□□ -1.48
VMS1YDR049W FUS1P11710 512 aa5.83□□□□□ -1.48
VMS1YDR049W IMG2P25642 146 aaPredicted RBP5.83□□□□□ -1.48
VMS1YDR049W GAR1P28007 205 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W ARP2P32381 391 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W IST3P40565 148 aaPredicted RBP5.83□□□□□ -1.48
VMS1YDR049W YGL138CP53122 345 aa5.83□□□□□ -1.48
VMS1YDR049W RHO5P53879 331 aaKnown RBP5.83□□□□□ -1.48
VMS1YDR049W ESBP6P53918 673 aa5.83□□□□□ -1.48
VMS1YDR049W RPM2Q02773 1202 aa5.83□□□□□ -1.48
VMS1YDR049W PPM1Q04081 328 aa5.83□□□□□ -1.48
VMS1YDR049W YLR455WQ06188 304 aa5.83□□□□□ -1.48
VMS1YDR049W GPB1Q08886 897 aa5.83□□□□□ -1.48
VMS1YDR049W YPL277CQ08989 487 aa5.83□□□□□ -1.48
VMS1YDR049W CMC2Q3E7A4 109 aa5.83□□□□□ -1.48
VMS1YDR049W NBL1Q3E7Y6 73 aa5.83□□□□□ -1.48
VMS1YDR049W XRN1P22147 1528 aaKnown RBP5.82□□□□□ -1.48
VMS1YDR049W DIF1O13577 133 aa5.82□□□□□ -1.48
VMS1YDR049W YCL002CP25565 263 aa5.82□□□□□ -1.48
VMS1YDR049W RDS1P25611 832 aa5.82□□□□□ -1.48
VMS1YDR049W HIR2P32480 875 aa5.82□□□□□ -1.48
VMS1YDR049W KKQ8P36004 724 aa5.82□□□□□ -1.48
VMS1YDR049W YKL151CP36059 337 aa5.82□□□□□ -1.48
VMS1YDR049W YKR078WP36158 585 aaKnown RBP5.82□□□□□ -1.48
VMS1YDR049W ATP3P38077 311 aaKnown RBP5.82□□□□□ -1.48
VMS1YDR049W RRT2P38332 387 aa5.82□□□□□ -1.48
VMS1YDR049W BEM4P39011 633 aa5.82□□□□□ -1.48
VMS1YDR049W GPB2P39717 880 aa5.82□□□□□ -1.48
VMS1YDR049W SSO2P39926 295 aa5.82□□□□□ -1.48
VMS1YDR049W ELP2P42935 788 aa5.82□□□□□ -1.48
VMS1YDR049W EFM3P47163 339 aa5.82□□□□□ -1.48
VMS1YDR049W YNL143CP53908 130 aa5.82□□□□□ -1.48
VMS1YDR049W RPA49Q01080 415 aaPredicted RBP5.82□□□□□ -1.48
VMS1YDR049W KAP120Q02932 1032 aa5.82□□□□□ -1.48
VMS1YDR049W RSN1Q03516 953 aa5.82□□□□□ -1.48
VMS1YDR049W HRQ1Q05549 1077 aa5.82□□□□□ -1.48
VMS1YDR049W YLR407WQ06070 228 aa5.82□□□□□ -1.48
VMS1YDR049W MED4Q12343 284 aa5.82□□□□□ -1.48
VMS1YDR049W LAG2Q92325 660 aa5.82□□□□□ -1.48
VMS1YDR049W DFR1P07807 211 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
VMS1YDR049W OSM1P21375 501 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W BUD14P27637 709 aa5.81□□□□□ -1.48
VMS1YDR049W YKR075CP36155 307 aa5.81□□□□□ -1.48
VMS1YDR049W SHM1P37292 490 aaPredicted RBP5.81□□□□□ -1.48
VMS1YDR049W SMF2P38778 549 aa5.81□□□□□ -1.48
VMS1YDR049W DOT5P40553 215 aa5.81□□□□□ -1.48
VMS1YDR049W JJJ2P46997 583 aa5.81□□□□□ -1.48
VMS1YDR049W YGR067CP53243 804 aa5.81□□□□□ -1.48
VMS1YDR049W MUK1Q02866 612 aa5.81□□□□□ -1.48
VMS1YDR049W CRR1Q05790 422 aa5.81□□□□□ -1.48
VMS1YDR049W CRD1Q07560 283 aa5.81□□□□□ -1.48
VMS1YDR049W UAF30Q08747 228 aa5.81□□□□□ -1.48
VMS1YDR049W RPS17AP02407 136 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W RPS17BP14127 136 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W THR4P16120 514 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W PGM1P33401 570 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W ATG14P38270 344 aa5.81□□□□□ -1.48
VMS1YDR049W MPT5P39016 859 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
VMS1YDR049W SLZ1P40167 298 aa5.81□□□□□ -1.48
VMS1YDR049W CAB2P40506 365 aa5.81□□□□□ -1.48
VMS1YDR049W ABM1P47146 123 aa5.81□□□□□ -1.48
VMS1YDR049W AAD10P47182 288 aa5.81□□□□□ -1.48
VMS1YDR049W TAF4P50105 388 aa5.81□□□□□ -1.48
VMS1YDR049W SKP1P52286 194 aa5.81□□□□□ -1.48
VMS1YDR049W RRP46P53256 223 aaPredicted RBP5.81□□□□□ -1.48
VMS1YDR049W NOG2P53742 486 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W ARP4P80428 489 aa5.81□□□□□ -1.48
VMS1YDR049W YMR102CQ03177 834 aa5.81□□□□□ -1.48
VMS1YDR049W CLU1Q03690 1277 aaKnown RBP5.81□□□□□ -1.48
VMS1YDR049W YDR061WQ12298 539 aa5.81□□□□□ -1.48
VMS1YDR049W YLR149CQ99296 730 aa5.81□□□□□ -1.48
VMS1YDR049W TY2A-LR1P0C2J4 438 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-FP0CX61 438 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-GR2P0CX62 438 aa5.8□□□□□ -1.48
VMS1YDR049W RSR1P13856 272 aa5.8□□□□□ -1.48
VMS1YDR049W TY2A-CP25383 438 aa5.8□□□□□ -1.48
VMS1YDR049W YCR016WP25617 290 aaKnown RBP5.8□□□□□ -1.48
VMS1YDR049W MCX1P38323 520 aaPredicted RBP5.8□□□□□ -1.48
VMS1YDR049W YER085CP40058 173 aa5.8□□□□□ -1.48
VMS1YDR049W YER158CP40095 573 aa5.8□□□□□ -1.48
VMS1YDR049W SHR5P41912 237 aa5.8□□□□□ -1.48
VMS1YDR049W EMC2P47133 292 aaKnown RBP5.8□□□□□ -1.48
VMS1YDR049W CLA4P48562 842 aa5.8□□□□□ -1.48
VMS1YDR049W TOM22P49334 152 aa5.8□□□□□ -1.48
VMS1YDR049W APT1P49435 187 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms