RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W TVP38P36164 337 aa7.03□□□□□ -1.28
NUP84YDL116W TRF5P48561 642 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W YNR063WP53749 607 aa7.03□□□□□ -1.28
NUP84YDL116W GPI17Q04080 534 aa7.03□□□□□ -1.28
NUP84YDL116W VIK1Q12045 647 aa7.03□□□□□ -1.28
NUP84YDL116W YPR027CQ12079 277 aa7.03□□□□□ -1.28
NUP84YDL116W SGT2Q12118 346 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W GLN4P13188 809 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W PMA2P19657 947 aa7.03□□□□□ -1.28
NUP84YDL116W SSZ1P38788 538 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W CRP1P38845 465 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W MNN1P39106 762 aa7.03□□□□□ -1.28
NUP84YDL116W GUS1P46655 708 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
NUP84YDL116W LSC1P53598 329 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W YNL010WP53981 241 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W SED5Q01590 340 aa7.03□□□□□ -1.28
NUP84YDL116W TAF12Q03761 539 aa7.03□□□□□ -1.28
NUP84YDL116W RAD30Q04049 632 aa7.03□□□□□ -1.28
NUP84YDL116W YMR226CQ05016 267 aaKnown RBP7.03□□□□□ -1.28
NUP84YDL116W YCS4Q06156 1176 aa7.03□□□□□ -1.28
NUP84YDL116W SWA2Q06677 668 aa7.03□□□□□ -1.28
NUP84YDL116W UBX3Q12229 455 aa7.03□□□□□ -1.28
NUP84YDL116W RRP36Q12481 300 aaPredicted RBP7.03□□□□□ -1.28
NUP84YDL116W YPL247CQ12523 523 aa7.03□□□□□ -1.28
NUP84YDL116W LSO1Q3E827 93 aa7.03□□□□□ -1.28
NUP84YDL116W RPN13O13563 156 aa7.02□□□□□ -1.29
NUP84YDL116W ARG81P05085 880 aa7.02□□□□□ -1.29
NUP84YDL116W CHS1P08004 1131 aa7.02□□□□□ -1.29
NUP84YDL116W SPB1P25582 841 aaPredicted RBP7.02□□□□□ -1.29
NUP84YDL116W BEM1P29366 551 aa7.02□□□□□ -1.29
NUP84YDL116W SRL3P36167 246 aa7.02□□□□□ -1.29
NUP84YDL116W RDH54P38086 958 aa7.02□□□□□ -1.29
NUP84YDL116W TBS1P38114 1094 aa7.02□□□□□ -1.29
NUP84YDL116W YBR285WP38354 144 aa7.02□□□□□ -1.29
NUP84YDL116W SRP68P38687 599 aaKnown RBP7.02□□□□□ -1.29
NUP84YDL116W PPE1P38796 400 aa7.02□□□□□ -1.29
NUP84YDL116W PFD1P46988 109 aa7.02□□□□□ -1.29
NUP84YDL116W YJR154WP47181 346 aa7.02□□□□□ -1.29
NUP84YDL116W MTO1P53070 669 aa7.02□□□□□ -1.29
NUP84YDL116W GUD1Q07729 489 aa7.02□□□□□ -1.29
NUP84YDL116W BUD20Q08004 166 aaPredicted RBP7.02□□□□□ -1.29
NUP84YDL116W SGT1Q08446 395 aa7.02□□□□□ -1.29
NUP84YDL116W ULA1Q12059 462 aa7.02□□□□□ -1.29
NUP84YDL116W HRT3Q12347 344 aa7.02□□□□□ -1.29
NUP84YDL116W YGR161W-CQ3E744 92 aa7.02□□□□□ -1.29
NUP84YDL116W VPS5Q92331 675 aa7.02□□□□□ -1.29
NUP84YDL116W BRR1Q99177 341 aaPredicted RBP7.02□□□□□ -1.29
NUP84YDL116W SUC2P00724 532 aa7.02□□□□□ -1.29
NUP84YDL116W PRC1P00729 532 aa7.02□□□□□ -1.29
NUP84YDL116W COX4P04037 155 aa7.02□□□□□ -1.29
NUP84YDL116W NSP1P14907 823 aaKnown RBP7.02□□□□□ -1.29
NUP84YDL116W HSC82P15108 705 aaKnown RBP7.02□□□□□ -1.29
NUP84YDL116W GIP1P38229 639 aa7.02□□□□□ -1.29
NUP84YDL116W YEL025CP39991 1188 aa7.02□□□□□ -1.29
NUP84YDL116W ORM1P53224 222 aa7.02□□□□□ -1.29
NUP84YDL116W YNL033WP53964 284 aa7.02□□□□□ -1.29
NUP84YDL116W YNL019CP53975 284 aa7.02□□□□□ -1.29
NUP84YDL116W YNL018CP53976 612 aa7.02□□□□□ -1.29
NUP84YDL116W REG1Q00816 1014 aa7.02□□□□□ -1.29
NUP84YDL116W TAF11Q04226 346 aa7.02□□□□□ -1.29
NUP84YDL116W ECM38Q05902 660 aaPredicted RBP7.02□□□□□ -1.29
NUP84YDL116W ERF2Q06551 359 aa7.02□□□□□ -1.29
NUP84YDL116W YPR084WQ06821 456 aa7.02□□□□□ -1.29
NUP84YDL116W NOP12Q08208 459 aaKnown RBP7.02□□□□□ -1.29
NUP84YDL116W YOR131CQ12486 218 aa7.02□□□□□ -1.29
NUP84YDL116W PUT4P15380 627 aa7.01□□□□□ -1.29
NUP84YDL116W YCK2P23292 546 aaKnown RBP7.01□□□□□ -1.29
NUP84YDL116W CYS4P32582 507 aaKnown RBP7.01□□□□□ -1.29
NUP84YDL116W PEP7P32609 515 aa7.01□□□□□ -1.29
NUP84YDL116W MDJ1P35191 511 aa7.01□□□□□ -1.29
NUP84YDL116W MMS4P38257 691 aa7.01□□□□□ -1.29
NUP84YDL116W NAB3P38996 802 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
NUP84YDL116W GIP4P39732 760 aa7.01□□□□□ -1.29
NUP84YDL116W ELP2P42935 788 aa7.01□□□□□ -1.29
NUP84YDL116W RMR1P53060 241 aa7.01□□□□□ -1.29
NUP84YDL116W SLG1P54867 378 aa7.01□□□□□ -1.29
NUP84YDL116W CDC123Q05791 360 aa7.01□□□□□ -1.29
NUP84YDL116W RSB1Q08417 382 aa7.01□□□□□ -1.29
NUP84YDL116W CTT1P06115 562 aa7.01□□□□□ -1.29
NUP84YDL116W FLR1P38124 548 aa7.01□□□□□ -1.29
NUP84YDL116W RPS26AP39938 119 aaKnown RBP7.01□□□□□ -1.29
NUP84YDL116W RPS26BP39939 119 aaKnown RBP7.01□□□□□ -1.29
NUP84YDL116W ATP22P50273 684 aaPredicted RBP7.01□□□□□ -1.29
NUP84YDL116W YDR239CQ03780 787 aa7.01□□□□□ -1.29
NUP84YDL116W TPO1Q07824 586 aa7.01□□□□□ -1.29
NUP84YDL116W TRE2Q08693 809 aa7.01□□□□□ -1.29
NUP84YDL116W UPC2Q12151 913 aa7.01□□□□□ -1.29
NUP84YDL116W YLL054CQ12244 843 aa7.01□□□□□ -1.29
NUP84YDL116W UBR2Q07963 1872 aa7□□□□□ -1.29
NUP84YDL116W MET16P18408 261 aaPredicted RBP7□□□□□ -1.29
NUP84YDL116W SGF29P25554 259 aa7□□□□□ -1.29
NUP84YDL116W HRR25P29295 494 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W NTG1P31378 399 aa7□□□□□ -1.29
NUP84YDL116W DBP7P36120 742 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W SHC1P39000 512 aa7□□□□□ -1.29
NUP84YDL116W YAT2P40017 923 aa7□□□□□ -1.29
NUP84YDL116W INP51P40559 946 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W RLP7P40693 322 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W SWP82P43554 623 aa7□□□□□ -1.29
NUP84YDL116W IMD4P50094 524 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms