RNA–Protein interactions for RNA: YDL110C

TMA17, Transcript of ATPase dedicated chaperone that adapts proteasome assembly to stress, yeast

Gene TMA17, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA17	YDL110C	PCL5	P38794	229 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	CEM1	P39525	442 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	YAL037W	P39728	267 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	YMR134W	P40207	237 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	ERR3	P42222	437 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	ZIM17	P42844	174 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	YFR018C	P43599	363 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	OSW7	P43611	510 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	TY4A-J	P47023	414 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	TGL2	P54857	326 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	RSC4	Q02206	625 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	TDA9	Q04545	1251 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	GSF2	Q04697	403 aa	Known RBP	4.11	□□□□□ -1.75
TMA17	YDL110C	STP3	Q05937	343 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	YOL036W	Q08206	761 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	YOL073C	Q08232	322 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	TGL5	Q12043	749 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	SUL2	Q12325	893 aa		4.11	□□□□□ -1.75
TMA17	YDL110C	BRR2	P32639	2163 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	IMA3	P0CW40	589 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	IMA4	P0CW41	589 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	RED1	P14291	827 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	VPS34	P22543	875 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	GID7	P25569	745 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	HEM12	P32347	362 aa	Predicted RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	SPT16	P32558	1035 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	SMI1	P32566	505 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	STO1	P34160	861 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	PIM1	P36775	1133 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	ARA1	P38115	344 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	STN1	P38960	494 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	MEF2	P39677	819 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	RGI2	P40188	164 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	DPH1	P40487	425 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	IRR1	P40541	1150 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	CFD1	P40558	293 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	GTS1	P40956	396 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	SSU1	P41930	458 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	TAH11	P47112	604 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	HST3	P53687	447 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	BNI4	P53858	892 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	EFM6	P53970	246 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	ECM9	Q02202	377 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	EGD1	Q02642	157 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	SLU7	Q02775	382 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	RLI1	Q03195	608 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	ROT1	Q03691	256 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	ARX1	Q03862	593 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	YMR114C	Q04471	368 aa	Known RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	RCO1	Q04779	684 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	BUD20	Q08004	166 aa	Predicted RBP	4.1	□□□□□ -1.75
TMA17	YDL110C	IMA2	Q08295	589 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	BUD7	Q08754	746 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	YOR389W	Q08912	624 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	YPL278C	Q08990	100 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	LDB17	Q12342	491 aa		4.1	□□□□□ -1.75
TMA17	YDL110C	QCR6	P00127	147 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	CPA1	P07258	411 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	ERG20	P08524	352 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	CDC24	P11433	854 aa	Predicted RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	AMD1	P15274	810 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	PHO84	P25297	587 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	PAP1	P29468	568 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	NDI1	P32340	513 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	GCD6	P32501	712 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	DED81	P38707	554 aa	Known RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	SEO1	P39709	593 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	YEL073C	P39974	107 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	SCC4	P40090	624 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	IME4	P41833	600 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	BOP3	P53958	396 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	PET117	Q02771	107 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	MTG1	Q03151	367 aa	Predicted RBP	4.09	□□□□□ -1.75
TMA17	YDL110C	TRS31	Q03337	283 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	AIM41	Q12032	185 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	HOS1	Q12214	470 aa		4.09	□□□□□ -1.75
TMA17	YDL110C	INO1	P11986	533 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	VAN1	P23642	535 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	YCR006C	P25350	157 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	SRB4	P32569	687 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	CDC13	P32797	924 aa	Known RBP	4.08	□□□□□ -1.76
TMA17	YDL110C	HFA1	P32874	2273 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	LRG1	P35688	1017 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	KES1	P35844	434 aa	Known RBP	4.08	□□□□□ -1.76
TMA17	YDL110C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
TMA17	YDL110C	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	UBS1	P38290	277 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	SMF2	P38778	549 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	UBA4	P38820	440 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	SMF1	P38925	575 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	LSM5	P40089	93 aa	Known RBP	4.08	□□□□□ -1.76
TMA17	YDL110C	LRO1	P40345	661 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	ALG8	P40351	577 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	SPG5	P42933	373 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	YJL107C	P42947	387 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	ALR2	P43553	858 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	YFL012W	P43580	148 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	CSL4	P53859	292 aa	Predicted RBP	4.08	□□□□□ -1.76
TMA17	YDL110C	ARP4	P80428	489 aa		4.08	□□□□□ -1.76
TMA17	YDL110C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms