RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	ENT1	Q12518	454 aa		6.23	□□□□□ -1.41
SIR2	YDL042C	SRB5	P32585	307 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	HOT13	P36078	116 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	YEL068C	P39977	110 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	YRB30	P53107	440 aa	Predicted RBP	6.22	□□□□□ -1.41
SIR2	YDL042C	BSC5	P53755	489 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	ADE16	P54113	591 aa	Known RBP	6.22	□□□□□ -1.41
SIR2	YDL042C	CRN1	Q06440	651 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	SPN1	Q06505	410 aa	Predicted RBP	6.22	□□□□□ -1.41
SIR2	YDL042C	PSK2	Q08217	1101 aa		6.22	□□□□□ -1.41
SIR2	YDL042C	LEA1	Q08963	238 aa	Predicted RBP	6.22	□□□□□ -1.41
SIR2	YDL042C	ESC1	Q03661	1658 aa	Known RBP	6.22	□□□□□ -1.41
SIR2	YDL042C	GSH1	P32477	678 aa		6.21	□□□□□ -1.42
SIR2	YDL042C	SIP4	P46954	829 aa		6.21	□□□□□ -1.42
SIR2	YDL042C	OSW1	Q08692	278 aa		6.21	□□□□□ -1.42
SIR2	YDL042C	SKM1	Q12469	655 aa		6.21	□□□□□ -1.42
SIR2	YDL042C	PCT1	P13259	424 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	FCP1	Q03254	732 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	FTH1	P38310	465 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	PHM8	P40025	321 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	FMP10	P40098	244 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	YOR019W	Q99248	730 aa		6.2	□□□□□ -1.42
SIR2	YDL042C	CDC16	P09798	840 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	HOM2	P13663	365 aa	Known RBP	6.19	□□□□□ -1.42
SIR2	YDL042C	MAK32	P23060	363 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	CDC15	P27636	974 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	YNR061C	P53747	219 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	MUB1	Q03162	620 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	BSP1	Q06604	576 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	LYS21	Q12122	440 aa	Known RBP	6.19	□□□□□ -1.42
SIR2	YDL042C	RRI2	Q12348	645 aa		6.19	□□□□□ -1.42
SIR2	YDL042C	SAN1	P22470	610 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	PAH1	P32567	862 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	PEX2	P32800	271 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	ALY1	P36117	915 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	KTR3	P38130	404 aa	Predicted RBP	6.18	□□□□□ -1.42
SIR2	YDL042C	IMD2	P38697	523 aa	Known RBP	6.18	□□□□□ -1.42
SIR2	YDL042C	ASG1	P40467	964 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	LYS14	P40971	790 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	IMD3	P50095	523 aa	Known RBP	6.18	□□□□□ -1.42
SIR2	YDL042C	ATP23	P53722	227 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	YPL071C	Q02864	156 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	SPP41	P38904	1435 aa		6.18	□□□□□ -1.42
SIR2	YDL042C	ERG11	P10614	530 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	NOP16	P40007	231 aa	Known RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	SLZ1	P40167	298 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	SWP82	P43554	623 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	ARC1	P46672	376 aa	Known RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	SUI3	P09064	285 aa	Known RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	CDC24	P11433	854 aa	Predicted RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	SRP54	P20424	541 aa	Known RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	IME4	P41833	600 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	YPR003C	P53394	754 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	COG4	Q06096	861 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	TPO3	Q06451	622 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	VIP1	Q06685	1146 aa	Known RBP	6.17	□□□□□ -1.42
SIR2	YDL042C	THI3	Q07471	609 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	ENT4	Q07872	247 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	YLR111W	Q12528	110 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	YOR111W	Q99210	232 aa		6.17	□□□□□ -1.42
SIR2	YDL042C	CET1	O13297	549 aa	Predicted RBP	6.16	□□□□□ -1.42
SIR2	YDL042C	AAC3	P18238	307 aa		6.16	□□□□□ -1.42
SIR2	YDL042C	NTR2	P36118	322 aa	Predicted RBP	6.16	□□□□□ -1.42
SIR2	YDL042C	AAP1	P37898	856 aa	Known RBP	6.16	□□□□□ -1.42
SIR2	YDL042C	AAD10	P47182	288 aa		6.16	□□□□□ -1.42
SIR2	YDL042C	PIL1	P53252	339 aa	Known RBP	6.16	□□□□□ -1.42
SIR2	YDL042C	IRC3	Q06683	689 aa		6.16	□□□□□ -1.42
SIR2	YDL042C	PRE8	P23639	250 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	LHS1	P36016	881 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	ERP2	P39704	215 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	MRX1	P40050	688 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	CIN1	P40987	1014 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	UPF3	P48412	387 aa	Known RBP	6.15	□□□□□ -1.42
SIR2	YDL042C	BPL1	P48445	690 aa	Predicted RBP	6.15	□□□□□ -1.42
SIR2	YDL042C	SNU56	Q03782	492 aa	Known RBP	6.15	□□□□□ -1.42
SIR2	YDL042C	GPN2	Q08726	347 aa	Predicted RBP	6.15	□□□□□ -1.42
SIR2	YDL042C	TSC11	P40061	1430 aa		6.15	□□□□□ -1.42
SIR2	YDL042C	TRM732	Q03496	1420 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	IMP2'	P32351	346 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	RPN12	P32496	274 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	SOF1	P33750	489 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	CUE2	P36075	443 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	SEC31	P38968	1273 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	ERV46	P39727	415 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	INN1	P53901	409 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	YSA1	Q01976	231 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	RSM28	Q03430	361 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	RAD30	Q04049	632 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-JR2	P47100	1755 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-ER2	Q03619	1755 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-MR1	Q04214	1755 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-MR2	Q04670	1755 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-LR1	Q12088	1755 aa	Known RBP	6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-NL1	Q12112	1755 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-GR1	Q12141	1755 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	TY1B-BL	Q12490	1755 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	YBR085C-A	O43137	85 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	ORC2	P32833	620 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	ESL2	P36168	1195 aa		6.14	□□□□□ -1.43
SIR2	YDL042C	UBP13	P38187	747 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 193.5 ms