RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SLN1P39928 1220 aaPredicted RBP5.74□□□□□ -1.49
PDB1YBR221C CHS6P40955 746 aa5.74□□□□□ -1.49
PDB1YBR221C IRC5P43610 853 aa5.74□□□□□ -1.49
PDB1YBR221C ROK1P45818 564 aaPredicted RBP5.74□□□□□ -1.49
PDB1YBR221C ALY2P47029 1046 aa5.74□□□□□ -1.49
PDB1YBR221C RPL6AQ02326 176 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C MRPS17Q03246 237 aaPredicted RBP5.74□□□□□ -1.49
PDB1YBR221C NGL1Q08213 363 aaKnown RBP5.74□□□□□ -1.49
PDB1YBR221C RIM20Q12033 661 aa5.74□□□□□ -1.49
PDB1YBR221C IOC2Q12072 812 aa5.74□□□□□ -1.49
PDB1YBR221C CTF3Q12748 733 aa5.74□□□□□ -1.49
PDB1YBR221C LAM4P38800 1345 aa5.74□□□□□ -1.49
PDB1YBR221C UNG1P12887 359 aa5.73□□□□□ -1.49
PDB1YBR221C FUS3P16892 353 aaKnown RBP5.73□□□□□ -1.49
PDB1YBR221C DAP2P18962 818 aa5.73□□□□□ -1.49
PDB1YBR221C BUD5P25300 642 aaPredicted RBP5.73□□□□□ -1.49
PDB1YBR221C PTR2P32901 601 aa5.73□□□□□ -1.49
PDB1YBR221C RPT5P33297 434 aaKnown RBP5.73□□□□□ -1.49
PDB1YBR221C MKS1P34072 584 aa5.73□□□□□ -1.49
PDB1YBR221C PTC4P38089 393 aa5.73□□□□□ -1.49
PDB1YBR221C MSR1P38714 643 aa5.73□□□□□ -1.49
PDB1YBR221C REV7P38927 245 aa5.73□□□□□ -1.49
PDB1YBR221C PFK26P40433 827 aaKnown RBP5.73□□□□□ -1.49
PDB1YBR221C YDL183CP48569 320 aa5.73□□□□□ -1.49
PDB1YBR221C MPP6P53725 186 aaPredicted RBP5.73□□□□□ -1.49
PDB1YBR221C MNT4P53745 580 aa5.73□□□□□ -1.49
PDB1YBR221C YNL165WP53891 406 aa5.73□□□□□ -1.49
PDB1YBR221C ATC1Q04005 294 aa5.73□□□□□ -1.49
PDB1YBR221C VAC14Q06708 880 aa5.73□□□□□ -1.49
PDB1YBR221C ACK1Q07622 623 aaPredicted RBP5.73□□□□□ -1.49
PDB1YBR221C YOR389WQ08912 624 aa5.73□□□□□ -1.49
PDB1YBR221C SWT1Q12104 458 aa5.73□□□□□ -1.49
PDB1YBR221C LSP1Q12230 341 aaKnown RBP5.73□□□□□ -1.49
PDB1YBR221C LDB17Q12342 491 aa5.73□□□□□ -1.49
PDB1YBR221C AFI1Q99222 893 aa5.73□□□□□ -1.49
PDB1YBR221C COQ4O13525 335 aa5.72□□□□□ -1.49
PDB1YBR221C ARG82P07250 355 aa5.72□□□□□ -1.49
PDB1YBR221C PRB1P09232 635 aa5.72□□□□□ -1.49
PDB1YBR221C RPL1AP0CX43 217 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C RPL1BP0CX44 217 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C GCD2P12754 651 aaPredicted RBP5.72□□□□□ -1.49
PDB1YBR221C THR4P16120 514 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C RPC31P17890 251 aa5.72□□□□□ -1.49
PDB1YBR221C PMA2P19657 947 aa5.72□□□□□ -1.49
PDB1YBR221C NFS1P25374 497 aa5.72□□□□□ -1.49
PDB1YBR221C PAT1P25644 796 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C RPS7AP26786 190 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C ERV1P27882 189 aa5.72□□□□□ -1.49
PDB1YBR221C EFT1P32324 842 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C DGR2P32330 852 aa5.72□□□□□ -1.49
PDB1YBR221C HXT4P32467 576 aa5.72□□□□□ -1.49
PDB1YBR221C CDC12P32468 407 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C HIR2P32480 875 aa5.72□□□□□ -1.49
PDB1YBR221C LTV1P34078 463 aa5.72□□□□□ -1.49
PDB1YBR221C VRP1P37370 817 aa5.72□□□□□ -1.49
PDB1YBR221C TOM71P38825 639 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C LRO1P40345 661 aa5.72□□□□□ -1.49
PDB1YBR221C YIL165CP40446 119 aa5.72□□□□□ -1.49
PDB1YBR221C MND2P40577 368 aa5.72□□□□□ -1.49
PDB1YBR221C YGL242CP53066 181 aa5.72□□□□□ -1.49
PDB1YBR221C RRP46P53256 223 aaPredicted RBP5.72□□□□□ -1.49
PDB1YBR221C PGA2P53903 129 aa5.72□□□□□ -1.49
PDB1YBR221C NMA111P53920 997 aa5.72□□□□□ -1.49
PDB1YBR221C ORC4P54791 529 aa5.72□□□□□ -1.49
PDB1YBR221C ABZ2Q03266 374 aa5.72□□□□□ -1.49
PDB1YBR221C SSL1Q04673 461 aaPredicted RBP5.72□□□□□ -1.49
PDB1YBR221C HBT1Q07653 1046 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C BRX1Q08235 291 aaKnown RBP5.72□□□□□ -1.49
PDB1YBR221C YIG1Q08956 461 aa5.72□□□□□ -1.49
PDB1YBR221C YLR302CO13544 120 aa5.71□□□□□ -1.5
PDB1YBR221C TUB2P02557 457 aaKnown RBP5.71□□□□□ -1.5
PDB1YBR221C CBP2P03874 630 aaPredicted RBP5.71□□□□□ -1.5
PDB1YBR221C TAL1P15019 335 aaKnown RBP5.71□□□□□ -1.5
PDB1YBR221C YCK1P23291 538 aa5.71□□□□□ -1.5
PDB1YBR221C CDC15P27636 974 aa5.71□□□□□ -1.5
PDB1YBR221C RPC82P32349 654 aa5.71□□□□□ -1.5
PDB1YBR221C NAB2P32505 525 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
PDB1YBR221C SUA5P32579 426 aa5.71□□□□□ -1.5
PDB1YBR221C TPO5P36029 618 aa5.71□□□□□ -1.5
PDB1YBR221C YKR015CP36111 568 aa5.71□□□□□ -1.5
PDB1YBR221C YKR018CP36114 725 aa5.71□□□□□ -1.5
PDB1YBR221C SRO77P38163 1010 aa5.71□□□□□ -1.5
PDB1YBR221C YEL057CP39983 233 aa5.71□□□□□ -1.5
PDB1YBR221C ASG1P40467 964 aa5.71□□□□□ -1.5
PDB1YBR221C VID28P40547 921 aa5.71□□□□□ -1.5
PDB1YBR221C UBP15P50101 1230 aa5.71□□□□□ -1.5
PDB1YBR221C PPT1P53043 513 aa5.71□□□□□ -1.5
PDB1YBR221C YGR111WP53265 400 aa5.71□□□□□ -1.5
PDB1YBR221C AQR1P53943 586 aa5.71□□□□□ -1.5
PDB1YBR221C KTR6P54070 446 aa5.71□□□□□ -1.5
PDB1YBR221C NGL3Q03210 505 aa5.71□□□□□ -1.5
PDB1YBR221C ROY1Q04847 553 aa5.71□□□□□ -1.5
PDB1YBR221C THI3Q07471 609 aa5.71□□□□□ -1.5
PDB1YBR221C UBX3Q12229 455 aa5.71□□□□□ -1.5
PDB1YBR221C MRPL23Q12487 163 aaPredicted RBP5.71□□□□□ -1.5
PDB1YBR221C CMC2Q3E7A4 109 aa5.71□□□□□ -1.5
PDB1YBR221C STE2D6VTK4 431 aa5.7□□□□□ -1.5
PDB1YBR221C GPA1P08539 472 aa5.7□□□□□ -1.5
PDB1YBR221C YEL076C-AP0CX16 216 aa5.7□□□□□ -1.5
PDB1YBR221C YLR464WP0CX17 216 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms