RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	DIB1	Q06819	143 aa	Predicted RBP	4.63	□□□□□ -1.67
SHE1	YBL031W	YPL150W	Q12152	901 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	ZPS1	Q12512	249 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	SAC3	P46674	1301 aa		4.63	□□□□□ -1.67
SHE1	YBL031W	TPK2	P06245	380 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	WHI2	P12611	486 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	GFD2	P25370	566 aa	Known RBP	4.62	□□□□□ -1.67
SHE1	YBL031W	CBF2	P32504	956 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	CNS1	P33313	385 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SHE1	YBL031W	YMC2	P38087	329 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	RFT1	P38206	574 aa	Predicted RBP	4.62	□□□□□ -1.67
SHE1	YBL031W	MIT1	P40002	666 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	RRT6	P53117	311 aa	Predicted RBP	4.62	□□□□□ -1.67
SHE1	YBL031W	MEP3	P53390	489 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	CPR8	P53728	308 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	MTG1	Q03151	367 aa	Predicted RBP	4.62	□□□□□ -1.67
SHE1	YBL031W	GTB1	Q04924	702 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	RRI2	Q12348	645 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	ENT1	Q12518	454 aa		4.62	□□□□□ -1.67
SHE1	YBL031W	USO1	P25386	1790 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	CPA2	P03965	1118 aa	Known RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	MATALPHA2	P0CY08	210 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	HMLALPHA2	P0CY09	210 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	GUK1	P15454	187 aa	Known RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	SPO16	P17122	198 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	YKT6	P36015	200 aa	Known RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	AXL2	P38928	823 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	LAS21	P40367	830 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	RIC1	P40395	1056 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	YIL161W	P40449	235 aa	Known RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	MNT3	P40549	630 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	IST3	P40565	148 aa	Predicted RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	SNM1	P40993	198 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	TAM41	P53230	385 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	ADE16	P54113	591 aa	Known RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	VPS60	Q03390	229 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	ATG23	Q06671	453 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	TRM8	Q12009	286 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	NBP2	Q12163	236 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	COX17	Q12287	69 aa		4.61	□□□□□ -1.67
SHE1	YBL031W	SSK22	P25390	1331 aa	Predicted RBP	4.61	□□□□□ -1.67
SHE1	YBL031W	CYB2	P00175	591 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	CHO2	P05374	869 aa	Known RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-LR1	P0C2J4	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-F	P0CX61	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-GR2	P0CX62	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	YPK1	P12688	680 aa	Known RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	HSC82	P15108	705 aa	Known RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	RNR3	P21672	869 aa	Known RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-C	P25383	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	LRE1	P25579	583 aa	Known RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	PEP3	P27801	918 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	YPT10	P38146	199 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	ARO9	P38840	513 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	TMA108	P40462	946 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	ASE1	P50275	885 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	COG1	P53079	417 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	GND2	P53319	492 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-DR2	Q03483	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TMN2	Q04562	672 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	MRH1	Q12117	320 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-B	Q12260	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-OR2	Q12293	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-DR1	Q12392	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-OR1	Q12439	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	TY2A-DR3	Q99303	438 aa		4.6	□□□□□ -1.67
SHE1	YBL031W	RPN13	O13563	156 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	ATP2	P00830	511 aa	Known RBP	4.59	□□□□□ -1.67
SHE1	YBL031W	PET111	P08468	800 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	URK1	P27515	501 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	IMP2'	P32351	346 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	RRP1	P35178	278 aa	Predicted RBP	4.59	□□□□□ -1.67
SHE1	YBL031W	MTH1	P35198	433 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	MAL33	P38157	468 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	VPS8	P39702	1274 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	OPT1	P40897	799 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	YGL117W	P53133	265 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	COG2	P53271	262 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	YNL092W	P53934	400 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	ZDS2	P54786	942 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	COG4	Q06096	861 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	SPN1	Q06505	410 aa	Predicted RBP	4.59	□□□□□ -1.67
SHE1	YBL031W	TAH18	Q12181	623 aa		4.59	□□□□□ -1.67
SHE1	YBL031W	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.67
SHE1	YBL031W	YMR084W	A2P2R3	262 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	SIP1	P32578	815 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	PES4	P39684	611 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	ERP2	P39704	215 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	YPT11	P48559	417 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	ASN1	P49089	572 aa	Known RBP	4.58	□□□□□ -1.68
SHE1	YBL031W	MRK1	P50873	501 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	RTC4	P53850	401 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	CBK1	P53894	756 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	RCO1	Q04779	684 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	IRC10	Q08118	586 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	SWT1	Q12104	458 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	CEX1	Q12453	761 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	YOL087C	Q99247	1116 aa		4.58	□□□□□ -1.68
SHE1	YBL031W	YLR302C	O13544	120 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms