RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 DJP1P40564 432 aa3.48□□□□□ -1.85
VAR1Q0140 CTL1Q03220 320 aaKnown RBP3.48□□□□□ -1.85
VAR1Q0140 EKI1Q03764 534 aa3.48□□□□□ -1.85
VAR1Q0140 FRD1P32614 470 aaKnown RBP3.47□□□□□ -1.85
VAR1Q0140 BUD16P39988 312 aa3.47□□□□□ -1.85
VAR1Q0140 MKT1P40850 830 aaKnown RBP3.47□□□□□ -1.85
VAR1Q0140 RTS2P40962 232 aa3.47□□□□□ -1.85
VAR1Q0140 CNM67P53865 581 aaKnown RBP3.47□□□□□ -1.85
VAR1Q0140 COG6P53959 839 aa3.47□□□□□ -1.85
VAR1Q0140 SGF73P53165 657 aa3.46□□□□□ -1.86
VAR1Q0140 PSR2Q07949 397 aa3.46□□□□□ -1.86
VAR1Q0140 TMA17Q12513 150 aa3.46□□□□□ -1.86
VAR1Q0140 CSR2Q12734 1121 aa3.46□□□□□ -1.86
VAR1Q0140 GLN3P18494 730 aa3.45□□□□□ -1.86
VAR1Q0140 TFC4P33339 1025 aa3.45□□□□□ -1.86
VAR1Q0140 ADE17P38009 592 aaKnown RBP3.45□□□□□ -1.86
VAR1Q0140 ENP1P38333 483 aaKnown RBP3.45□□□□□ -1.86
VAR1Q0140 CAB2P40506 365 aa3.45□□□□□ -1.86
VAR1Q0140 ASK10P48361 1146 aa3.45□□□□□ -1.86
VAR1Q0140 YMR178WQ03219 274 aaKnown RBP3.45□□□□□ -1.86
VAR1Q0140 PFA5Q03289 374 aa3.45□□□□□ -1.86
VAR1Q0140 YSP3P25036 478 aa3.44□□□□□ -1.86
VAR1Q0140 LDB16P25587 256 aa3.44□□□□□ -1.86
VAR1Q0140 RFA2P26754 273 aaKnown RBP3.44□□□□□ -1.86
VAR1Q0140 YJR120WP47157 116 aa3.44□□□□□ -1.86
VAR1Q0140 MTG1Q03151 367 aaPredicted RBP3.44□□□□□ -1.86
VAR1Q0140 ATG23Q06671 453 aa3.44□□□□□ -1.86
VAR1Q0140 CHO1P08456 276 aa3.43□□□□□ -1.86
VAR1Q0140 RTS1P38903 757 aa3.43□□□□□ -1.86
VAR1Q0140 HXT9P40885 567 aa3.43□□□□□ -1.86
VAR1Q0140 FET5P43561 622 aa3.43□□□□□ -1.86
VAR1Q0140 TAM41P53230 385 aa3.43□□□□□ -1.86
VAR1Q0140 ARP7Q12406 477 aa3.43□□□□□ -1.86
VAR1Q0140 TKL1P23254 680 aaKnown RBP3.42□□□□□ -1.86
VAR1Q0140 MCM3P24279 971 aaKnown RBP3.42□□□□□ -1.86
VAR1Q0140 UBP13P38187 747 aa3.42□□□□□ -1.86
VAR1Q0140 MDM31P38880 579 aa3.42□□□□□ -1.86
VAR1Q0140 YEN1P40028 759 aa3.42□□□□□ -1.86
VAR1Q0140 BOR1P53838 576 aa3.42□□□□□ -1.86
VAR1Q0140 ATG21Q02887 496 aa3.42□□□□□ -1.86
VAR1Q0140 SUL2Q12325 893 aa3.42□□□□□ -1.86
VAR1Q0140 EDE1P34216 1381 aa3.41□□□□□ -1.86
VAR1Q0140 SWH1P35845 1188 aa3.41□□□□□ -1.86
VAR1Q0140 STT3P39007 718 aaKnown RBP3.41□□□□□ -1.86
VAR1Q0140 DIM1P41819 318 aaKnown RBP3.41□□□□□ -1.86
VAR1Q0140 DCP2P53550 970 aaKnown RBP3.41□□□□□ -1.86
VAR1Q0140 PET122P10355 254 aa3.4□□□□□ -1.87
VAR1Q0140 GID7P25569 745 aa3.4□□□□□ -1.87
VAR1Q0140 LRE1P25579 583 aaKnown RBP3.4□□□□□ -1.87
VAR1Q0140 SPG5P42933 373 aa3.4□□□□□ -1.87
VAR1Q0140 PEX14P53112 341 aa3.4□□□□□ -1.87
VAR1Q0140 YML003WP0CF16 290 aa3.39□□□□□ -1.87
VAR1Q0140 RPB8P20436 146 aa3.39□□□□□ -1.87
VAR1Q0140 SIR1P21691 654 aa3.39□□□□□ -1.87
VAR1Q0140 SAC1P32368 623 aaKnown RBP3.39□□□□□ -1.87
VAR1Q0140 STV1P37296 890 aa3.39□□□□□ -1.87
VAR1Q0140 SEC31P38968 1273 aaKnown RBP3.39□□□□□ -1.87
VAR1Q0140 YJL068CP40363 299 aa3.39□□□□□ -1.87
VAR1Q0140 MAK10Q02197 733 aa3.39□□□□□ -1.87
VAR1Q0140 SWA2Q06677 668 aa3.39□□□□□ -1.87
VAR1Q0140 YLL056CQ12177 298 aa3.39□□□□□ -1.87
VAR1Q0140 MRS3P10566 314 aa3.38□□□□□ -1.87
VAR1Q0140 GCD7P32502 381 aaPredicted RBP3.38□□□□□ -1.87
VAR1Q0140 RFC1P38630 861 aaKnown RBP3.38□□□□□ -1.87
VAR1Q0140 YPI1P43587 155 aa3.38□□□□□ -1.87
VAR1Q0140 MAD3P47074 515 aa3.38□□□□□ -1.87
VAR1Q0140 CEG1Q01159 459 aaPredicted RBP3.38□□□□□ -1.87
VAR1Q0140 PET111P08468 800 aa3.37□□□□□ -1.87
VAR1Q0140 RIT1P23796 513 aa3.37□□□□□ -1.87
VAR1Q0140 CLB2P24869 491 aa3.37□□□□□ -1.87
VAR1Q0140 LOS1P33418 1100 aaPredicted RBP3.37□□□□□ -1.87
VAR1Q0140 MIC60P36112 540 aa3.37□□□□□ -1.87
VAR1Q0140 RPT2P40327 437 aaKnown RBP3.37□□□□□ -1.87
VAR1Q0140 RAP1P11938 827 aa3.36□□□□□ -1.87
VAR1Q0140 SRP54P20424 541 aaKnown RBP3.36□□□□□ -1.87
VAR1Q0140 LHS1P36016 881 aa3.36□□□□□ -1.87
VAR1Q0140 ERG7P38604 731 aa3.36□□□□□ -1.87
VAR1Q0140 RGI2P40188 164 aa3.36□□□□□ -1.87
VAR1Q0140 ADE3P07245 946 aaKnown RBP3.35□□□□□ -1.87
VAR1Q0140 BIK1P11709 440 aa3.35□□□□□ -1.87
VAR1Q0140 KRS1P15180 591 aaKnown RBP3.35□□□□□ -1.87
VAR1Q0140 MRX1P40050 688 aa3.35□□□□□ -1.87
VAR1Q0140 GUF1P46943 645 aa3.35□□□□□ -1.87
VAR1Q0140 CTK2P46962 323 aa3.35□□□□□ -1.87
VAR1Q0140 YDL186WP48568 277 aa3.35□□□□□ -1.87
VAR1Q0140 YTP1P53584 459 aa3.35□□□□□ -1.87
VAR1Q0140 TMA64Q04600 565 aaKnown RBP3.35□□□□□ -1.87
VAR1Q0140 YDL218WQ07629 317 aa3.35□□□□□ -1.87
VAR1Q0140 POL3P15436 1097 aa3.34□□□□□ -1.87
VAR1Q0140 ERG1P32476 496 aaKnown RBP3.34□□□□□ -1.87
VAR1Q0140 STP3Q05937 343 aa3.34□□□□□ -1.87
VAR1Q0140 IWR1Q07532 353 aaPredicted RBP3.34□□□□□ -1.87
VAR1Q0140 SWT1Q12104 458 aa3.34□□□□□ -1.87
VAR1Q0140 GDH1P07262 454 aaKnown RBP3.33□□□□□ -1.88
VAR1Q0140 ARP2P32381 391 aaKnown RBP3.33□□□□□ -1.88
VAR1Q0140 YJL132WP47014 750 aa3.33□□□□□ -1.88
VAR1Q0140 IMA1P53051 589 aa3.33□□□□□ -1.88
VAR1Q0140 YGL242CP53066 181 aa3.33□□□□□ -1.88
VAR1Q0140 NUP100Q02629 959 aa3.33□□□□□ -1.88
VAR1Q0140 SWI4P25302 1093 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms