RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
HDAC3-206ENST00000471968 RFX7Q2KHR2 1363 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 DOCK1Q14185 1865 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 KIF28PB7ZC32 967 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 PLIN1O60240 522 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-206ENST00000471968 HIBADHP31937 336 aaKnown RBP8.49□□□□□ -1.05
HDAC3-206ENST00000471968 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 SMAD2Q15796 467 aaKnown RBP8.49□□□□□ -1.05
HDAC3-206ENST00000471968 OLFML2BQ68BL8 750 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-206ENST00000471968 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 SUGCTQ9HAC7 445 aa8.49□□□□□ -1.05
HDAC3-206ENST00000471968 IQSEC3Q9UPP2 1182 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-206ENST00000471968 STXBP3O00186 592 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 TLR3O15455 904 aaKnown RBP8.48□□□□□ -1.05
HDAC3-206ENST00000471968 ADRB1P08588 477 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 CDK7P50613 346 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 CCNA1P78396 465 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 CLUL1Q15846 466 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 SH3D19Q5HYK7 790 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 CC2D1BQ5T0F9 858 aaKnown RBP8.48□□□□□ -1.05
HDAC3-206ENST00000471968 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 HHIPL2Q6UWX4 724 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 FAM126BQ8IXS8 530 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 RPUSD2Q8IZ73 545 aaKnown RBP8.48□□□□□ -1.05
HDAC3-206ENST00000471968 VTI1AQ96AJ9 217 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 LENG1Q96BZ8 264 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-206ENST00000471968 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
HDAC3-206ENST00000471968 MRIQ9BWK5 157 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 TMOD4Q9NZQ9 345 aa8.48□□□□□ -1.05
HDAC3-206ENST00000471968 LCHNA4D1U4 455 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 LMNAP02545 664 aaKnown RBP8.47□□□□□ -1.05
HDAC3-206ENST00000471968 MKRN4PQ13434 485 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-206ENST00000471968 MTMR2Q13614 643 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 HERC6Q8IVU3 1022 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-206ENST00000471968 TBC1D22AQ8WUA7 517 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 PABPC5Q96DU9 382 aaKnown RBP8.47□□□□□ -1.05
HDAC3-206ENST00000471968 GLT1D1Q96MS3 346 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 SLC9A7Q96T83 725 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 MAST3O60307 1309 aa8.47□□□□□ -1.05
HDAC3-206ENST00000471968 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.05
HDAC3-206ENST00000471968 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 ARVCFO00192 962 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 ADAMTS4O75173 837 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 FRAT2O75474 233 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-206ENST00000471968 CNMDO75829 334 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 ADORA2AP29274 412 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 ATXN1P54253 815 aaKnown RBP8.46□□□□□ -1.06
HDAC3-206ENST00000471968 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 CNGB1Q14028 1251 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-206ENST00000471968 KCNA10Q16322 511 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 TMEM105Q8N8V8 129 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 PHOSPHO2Q8TCD6 241 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 VWCEQ96DN2 955 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 SCLYQ96I15 445 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 FAM84BQ96KN1 310 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-206ENST00000471968 WNT8AQ9H1J5 351 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 HYPKQ9NX55 129 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 CLDND1Q9NY35 253 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 NUDCQ9Y266 331 aa8.46□□□□□ -1.06
HDAC3-206ENST00000471968 A0A1B0GUL6 1792 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 CEP295Q9C0D2 2601 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 USP17L5A8MUK1 530 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 MBTPS2O43462 519 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 RGS3P49796 1198 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 TBC1D2Q9BYX2 928 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 USP40Q9NVE5 1235 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 RABGAP1Q9Y3P9 1069 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 ELP1O95163 1332 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 DOCK2Q92608 1830 aa8.45□□□□□ -1.06
HDAC3-206ENST00000471968 A0A0U1RQG5 324 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-206ENST00000471968 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 DDTLA6NHG4 134 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-206ENST00000471968 CD4P01730 458 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 BACE1P56817 501 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 DEFB128Q7Z7B8 93 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 VPS37DQ86XT2 251 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 DCLK2Q8N568 766 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 RIPOR3Q96MK2 946 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 AS3MTQ9HBK9 375 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 PCDHGC5Q9Y5F6 944 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 SYNRGQ9UMZ2 1314 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 MYH3P11055 1940 aa8.44□□□□□ -1.06
HDAC3-206ENST00000471968 USP9XQ93008 2570 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 ANKRD18BA2A2Z9 1011 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 MYADML2A6NDP7 307 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 COBLO75128 1261 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 ACTN1P12814 892 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 LTBRP36941 435 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 TCEAL5Q5H9L2 206 aa8.43□□□□□ -1.06
HDAC3-206ENST00000471968 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-206ENST00000471968 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms