RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 RVB2Q12464 471 aaKnown RBP2.97□□□□□ -1.93
snR54snR54 GPA1P08539 472 aa2.96□□□□□ -1.94
snR54snR54 RFA2P26754 273 aaKnown RBP2.96□□□□□ -1.94
snR54snR54 TEP1P53916 434 aa2.96□□□□□ -1.94
snR54snR54 ADE16P54113 591 aaKnown RBP2.96□□□□□ -1.94
snR54snR54 PCT1P13259 424 aa2.95□□□□□ -1.94
snR54snR54 MCM3P24279 971 aaKnown RBP2.95□□□□□ -1.94
snR54snR54 MNN2P38069 597 aa2.95□□□□□ -1.94
snR54snR54 APM3P38153 483 aa2.95□□□□□ -1.94
snR54snR54 BUD16P39988 312 aa2.95□□□□□ -1.94
snR54snR54 QRI7P43122 407 aa2.95□□□□□ -1.94
snR54snR54 MSY1P48527 492 aa2.95□□□□□ -1.94
snR54snR54 PEX8P53248 589 aa2.95□□□□□ -1.94
snR54snR54 BET4Q00618 327 aa2.95□□□□□ -1.94
snR54snR54 GTB1Q04924 702 aa2.95□□□□□ -1.94
snR54snR54 GRS2Q06817 618 aa2.95□□□□□ -1.94
snR54snR54 IWR1Q07532 353 aaPredicted RBP2.95□□□□□ -1.94
snR54snR54 SUI3P09064 285 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 PET122P10355 254 aa2.94□□□□□ -1.94
snR54snR54 SST2P11972 698 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 ARP2P32381 391 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 CCT4P39078 528 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 ATG21Q02887 496 aa2.94□□□□□ -1.94
snR54snR54 CAC2Q04199 468 aa2.94□□□□□ -1.94
snR54snR54 EIS1Q05050 843 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 HIM1Q06674 414 aa2.94□□□□□ -1.94
snR54snR54 BRE1Q07457 700 aaKnown RBP2.94□□□□□ -1.94
snR54snR54 YSP3P25036 478 aa2.93□□□□□ -1.94
snR54snR54 SPC72P39723 622 aa2.93□□□□□ -1.94
snR54snR54 YND1P40009 630 aa2.93□□□□□ -1.94
snR54snR54 PCL6P40038 420 aa2.93□□□□□ -1.94
snR54snR54 ASG1P40467 964 aa2.93□□□□□ -1.94
snR54snR54 SAD1P43589 448 aa2.93□□□□□ -1.94
snR54snR54 UBP8P50102 471 aa2.93□□□□□ -1.94
snR54snR54 GIS2P53849 153 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
snR54snR54 ESBP6P53918 673 aa2.93□□□□□ -1.94
snR54snR54 MTG1Q03151 367 aaPredicted RBP2.93□□□□□ -1.94
snR54snR54 ARP9Q05123 467 aa2.93□□□□□ -1.94
snR54snR54 PIF1P07271 859 aa2.92□□□□□ -1.94
snR54snR54 SKP2P42843 763 aa2.92□□□□□ -1.94
snR54snR54 ZAP1P47043 880 aa2.92□□□□□ -1.94
snR54snR54 HOS2P53096 452 aaPredicted RBP2.92□□□□□ -1.94
snR54snR54 CPR6P53691 371 aaKnown RBP2.92□□□□□ -1.94
snR54snR54 MET14Q02196 202 aa2.92□□□□□ -1.94
snR54snR54 SWF1Q04629 336 aa2.92□□□□□ -1.94
snR54snR54 YTH1Q06102 208 aaPredicted RBP2.92□□□□□ -1.94
snR54snR54 TMA7Q3E764 64 aaKnown RBP2.92□□□□□ -1.94
snR54snR54 MSS18P08593 268 aa2.91□□□□□ -1.94
snR54snR54 YML003WP0CF16 290 aa2.91□□□□□ -1.94
snR54snR54 MRP2P10663 115 aaPredicted RBP2.91□□□□□ -1.94
snR54snR54 ADE17P38009 592 aaKnown RBP2.91□□□□□ -1.94
snR54snR54 YBR138CP38277 524 aa2.91□□□□□ -1.94
snR54snR54 ERR3P42222 437 aa2.91□□□□□ -1.94
snR54snR54 IMA1P53051 589 aa2.91□□□□□ -1.94
snR54snR54 YGL260WP53056 76 aa2.91□□□□□ -1.94
snR54snR54 YLR455WQ06188 304 aa2.91□□□□□ -1.94
snR54snR54 POS5Q06892 414 aa2.91□□□□□ -1.94
snR54snR54 APL5Q08951 932 aaKnown RBP2.91□□□□□ -1.94
snR54snR54 CBP1P07252 654 aa2.9□□□□□ -1.95
snR54snR54 PPZ1P26570 692 aa2.9□□□□□ -1.95
snR54snR54 GCD7P32502 381 aaPredicted RBP2.9□□□□□ -1.95
snR54snR54 UBP13P38187 747 aa2.9□□□□□ -1.95
snR54snR54 EFM2P38347 419 aa2.9□□□□□ -1.95
snR54snR54 PHM8P40025 321 aa2.9□□□□□ -1.95
snR54snR54 HIS6P40545 261 aa2.9□□□□□ -1.95
snR54snR54 DJP1P40564 432 aa2.9□□□□□ -1.95
snR54snR54 YMR317WQ04893 1140 aa2.9□□□□□ -1.95
snR54snR54 SWA2Q06677 668 aa2.9□□□□□ -1.95
snR54snR54 YLR049CQ12110 428 aa2.9□□□□□ -1.95
snR54snR54 BAG7Q12128 409 aa2.9□□□□□ -1.95
snR54snR54 YOR111WQ99210 232 aa2.9□□□□□ -1.95
snR54snR54 GAL1P04385 528 aa2.89□□□□□ -1.95
snR54snR54 PHO2P07269 559 aa2.89□□□□□ -1.95
snR54snR54 CHO1P08456 276 aa2.89□□□□□ -1.95
snR54snR54 MIS1P09440 975 aaKnown RBP2.89□□□□□ -1.95
snR54snR54 BIK1P11709 440 aa2.89□□□□□ -1.95
snR54snR54 LRE1P25579 583 aaKnown RBP2.89□□□□□ -1.95
snR54snR54 YKL133CP36066 463 aa2.89□□□□□ -1.95
snR54snR54 FMP46P36141 133 aaKnown RBP2.89□□□□□ -1.95
snR54snR54 EXO84P38261 753 aa2.89□□□□□ -1.95
snR54snR54 LEU5P38702 357 aa2.89□□□□□ -1.95
snR54snR54 VRG4P40107 337 aa2.89□□□□□ -1.95
snR54snR54 ASI1P54074 624 aa2.89□□□□□ -1.95
snR54snR54 FMP42Q04991 504 aa2.89□□□□□ -1.95
snR54snR54 MLC2Q06580 163 aa2.89□□□□□ -1.95
snR54snR54 GPN2Q08726 347 aaPredicted RBP2.89□□□□□ -1.95
snR54snR54 FSH1P38777 243 aaKnown RBP2.88□□□□□ -1.95
snR54snR54 RTT107P38850 1070 aa2.88□□□□□ -1.95
snR54snR54 PUG1P40100 303 aa2.88□□□□□ -1.95
snR54snR54 IML2P47031 731 aa2.88□□□□□ -1.95
snR54snR54 PSP1P50896 841 aaKnown RBP2.88□□□□□ -1.95
snR54snR54 TAN1P53072 289 aaPredicted RBP2.88□□□□□ -1.95
snR54snR54 PFA5Q03289 374 aa2.88□□□□□ -1.95
snR54snR54 ECI1Q05871 280 aa2.88□□□□□ -1.95
snR54snR54 ATG23Q06671 453 aa2.88□□□□□ -1.95
snR54snR54 YMR230W-AQ3E7B5 62 aa2.88□□□□□ -1.95
snR54snR54 PET111P08468 800 aa2.87□□□□□ -1.95
snR54snR54 HNM1P19807 563 aa2.87□□□□□ -1.95
snR54snR54 STE50P25344 346 aa2.87□□□□□ -1.95
snR54snR54 MGR1P25573 417 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms