RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	YMR027W	Q04371	470 aa		0.24	□□□□□ -2.37
snR50	snR50	ARP10	Q04549	284 aa		0.24	□□□□□ -2.37
snR50	snR50	MCP2	Q06567	569 aa		0.24	□□□□□ -2.37
snR50	snR50	GRC3	Q07845	632 aa		0.24	□□□□□ -2.37
snR50	snR50	YEH2	Q07950	538 aa		0.24	□□□□□ -2.37
snR50	snR50	RRG7	Q08774	242 aa	Predicted RBP	0.24	□□□□□ -2.37
snR50	snR50	HRT3	Q12347	344 aa		0.24	□□□□□ -2.37
snR50	snR50	GPA1	P08539	472 aa		0.23	□□□□□ -2.37
snR50	snR50	SFL1	P20134	766 aa		0.23	□□□□□ -2.37
snR50	snR50	AEP2	P22136	580 aa		0.23	□□□□□ -2.37
snR50	snR50	ARG1	P22768	420 aa		0.23	□□□□□ -2.37
snR50	snR50	CWH43	P25618	953 aa		0.23	□□□□□ -2.37
snR50	snR50	ARO2	P28777	376 aa	Known RBP	0.23	□□□□□ -2.37
snR50	snR50	ERG1	P32476	496 aa	Known RBP	0.23	□□□□□ -2.37
snR50	snR50	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
snR50	snR50	RMA1	P36001	430 aa	Known RBP	0.23	□□□□□ -2.37
snR50	snR50	SPC34	P36131	295 aa		0.23	□□□□□ -2.37
snR50	snR50	ERC1	P38767	581 aa		0.23	□□□□□ -2.37
snR50	snR50	RPR2	P40571	144 aa		0.23	□□□□□ -2.37
snR50	snR50	YFR016C	P43597	1233 aa	Known RBP	0.23	□□□□□ -2.37
snR50	snR50	RET2	P43621	546 aa		0.23	□□□□□ -2.37
snR50	snR50	RTT101	P47050	842 aa		0.23	□□□□□ -2.37
snR50	snR50	SHY1	P53266	389 aa		0.23	□□□□□ -2.37
snR50	snR50	ATG21	Q02887	496 aa		0.23	□□□□□ -2.37
snR50	snR50	TMA64	Q04600	565 aa	Known RBP	0.23	□□□□□ -2.37
snR50	snR50	YLR455W	Q06188	304 aa		0.23	□□□□□ -2.37
snR50	snR50	IES4	Q08561	116 aa		0.23	□□□□□ -2.37
snR50	snR50	RFM1	Q12192	310 aa		0.23	□□□□□ -2.37
snR50	snR50	SET6	Q12529	373 aa		0.23	□□□□□ -2.37
snR50	snR50	YCL021W-A	Q96VH3	125 aa		0.23	□□□□□ -2.37
snR50	snR50	APM4	Q99186	491 aa		0.23	□□□□□ -2.37
snR50	snR50	MRP2	P10663	115 aa	Predicted RBP	0.22	□□□□□ -2.37
snR50	snR50	CDC26	P14724	124 aa		0.22	□□□□□ -2.37
snR50	snR50	MTF1	P14908	341 aa	Known RBP	0.22	□□□□□ -2.37
snR50	snR50	MEF1	P25039	761 aa		0.22	□□□□□ -2.37
snR50	snR50	STE50	P25344	346 aa		0.22	□□□□□ -2.37
snR50	snR50	YCR006C	P25350	157 aa		0.22	□□□□□ -2.37
snR50	snR50	SPC110	P32380	944 aa		0.22	□□□□□ -2.37
snR50	snR50	SAC6	P32599	642 aa	Known RBP	0.22	□□□□□ -2.37
snR50	snR50	RFS1	P38234	210 aa	Known RBP	0.22	□□□□□ -2.37
snR50	snR50	STB5	P38699	743 aa		0.22	□□□□□ -2.37
snR50	snR50	RRP3	P38712	501 aa	Known RBP	0.22	□□□□□ -2.37
snR50	snR50	ARO9	P38840	513 aa	Predicted RBP	0.22	□□□□□ -2.37
snR50	snR50	LNP1	P38878	278 aa		0.22	□□□□□ -2.37
snR50	snR50	CHZ1	P40019	153 aa	Predicted RBP	0.22	□□□□□ -2.37
snR50	snR50	YTA12	P40341	825 aa		0.22	□□□□□ -2.37
snR50	snR50	MSO1	P53604	210 aa	Known RBP	0.22	□□□□□ -2.37
snR50	snR50	ASI1	P54074	624 aa		0.22	□□□□□ -2.37
snR50	snR50	ORC1	P54784	914 aa	Predicted RBP	0.22	□□□□□ -2.37
snR50	snR50	UGO1	Q03327	502 aa		0.22	□□□□□ -2.37
snR50	snR50	CIA1	Q05583	330 aa		0.22	□□□□□ -2.37
snR50	snR50	HNT3	Q08702	217 aa		0.22	□□□□□ -2.37
snR50	snR50	YOR387C	Q08910	206 aa		0.22	□□□□□ -2.37
snR50	snR50	RBD2	Q12270	262 aa		0.22	□□□□□ -2.37
snR50	snR50	YBR255C-A	Q3E776	120 aa		0.22	□□□□□ -2.37
snR50	snR50	YER078W-A	Q3E7A2	54 aa		0.22	□□□□□ -2.37
snR50	snR50	NAM9	P27929	486 aa		0.21	□□□□□ -2.38
snR50	snR50	DEG1	P31115	442 aa	Known RBP	0.21	□□□□□ -2.38
snR50	snR50	TYS1	P36421	394 aa	Known RBP	0.21	□□□□□ -2.38
snR50	snR50	SWD3	P38123	315 aa		0.21	□□□□□ -2.38
snR50	snR50	SEC31	P38968	1273 aa	Known RBP	0.21	□□□□□ -2.38
snR50	snR50	DSS1	P39112	969 aa		0.21	□□□□□ -2.38
snR50	snR50	IKS1	P47042	667 aa		0.21	□□□□□ -2.38
snR50	snR50	YGL081W	P53156	320 aa		0.21	□□□□□ -2.38
snR50	snR50	SQS1	P53866	767 aa	Known RBP	0.21	□□□□□ -2.38
snR50	snR50	MOT3	P54785	490 aa	Known RBP	0.21	□□□□□ -2.38
snR50	snR50	MAK10	Q02197	733 aa		0.21	□□□□□ -2.38
snR50	snR50	RRN11	Q04712	507 aa		0.21	□□□□□ -2.38
snR50	snR50	ERV2	Q12284	196 aa		0.21	□□□□□ -2.38
snR50	snR50	VPS5	Q92331	675 aa		0.21	□□□□□ -2.38
snR50	snR50	CTT1	P06115	562 aa		0.2	□□□□□ -2.38
snR50	snR50	PHO8	P11491	566 aa		0.2	□□□□□ -2.38
snR50	snR50	ATR1	P13090	542 aa		0.2	□□□□□ -2.38
snR50	snR50	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
snR50	snR50	MRC1	P25588	1096 aa		0.2	□□□□□ -2.38
snR50	snR50	LAC1	P28496	418 aa		0.2	□□□□□ -2.38
snR50	snR50	SEC65	P29478	273 aa		0.2	□□□□□ -2.38
snR50	snR50	ATS1	P31386	333 aa		0.2	□□□□□ -2.38
snR50	snR50	DGR2	P32330	852 aa		0.2	□□□□□ -2.38
snR50	snR50	NDC1	P32500	655 aa		0.2	□□□□□ -2.38
snR50	snR50	SIP1	P32578	815 aa		0.2	□□□□□ -2.38
snR50	snR50	YBL059W	P34224	193 aa		0.2	□□□□□ -2.38
snR50	snR50	OAF3	P36023	863 aa		0.2	□□□□□ -2.38
snR50	snR50	UTH1	P36135	365 aa		0.2	□□□□□ -2.38
snR50	snR50	CHK1	P38147	527 aa		0.2	□□□□□ -2.38
snR50	snR50	ERG7	P38604	731 aa		0.2	□□□□□ -2.38
snR50	snR50	TDA3	P38758	523 aa		0.2	□□□□□ -2.38
snR50	snR50	YER130C	P39959	443 aa		0.2	□□□□□ -2.38
snR50	snR50	RPT2	P40327	437 aa	Known RBP	0.2	□□□□□ -2.38
snR50	snR50	VID28	P40547	921 aa		0.2	□□□□□ -2.38
snR50	snR50	REE1	P40893	198 aa		0.2	□□□□□ -2.38
snR50	snR50	CHS6	P40955	746 aa		0.2	□□□□□ -2.38
snR50	snR50	IDS2	P46958	469 aa		0.2	□□□□□ -2.38
snR50	snR50	HLJ1	P48353	224 aa		0.2	□□□□□ -2.38
snR50	snR50	HUL5	P53119	910 aa		0.2	□□□□□ -2.38
snR50	snR50	ARK1	P53974	638 aa		0.2	□□□□□ -2.38
snR50	snR50	DIA1	P54005	336 aa		0.2	□□□□□ -2.38
snR50	snR50	HAL1	Q01766	294 aa		0.2	□□□□□ -2.38
snR50	snR50	YPR091C	Q06833	770 aa		0.2	□□□□□ -2.38
snR50	snR50	GUD1	Q07729	489 aa		0.2	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms