RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	SMK1	P41808	388 aa		1.01	□□□□□ -2.25
snR48	snR48	HLJ1	P48353	224 aa		1.01	□□□□□ -2.25
snR48	snR48	MTQ2	Q03920	221 aa	Predicted RBP	1.01	□□□□□ -2.25
snR48	snR48	YTM1	Q12024	460 aa	Predicted RBP	1.01	□□□□□ -2.25
snR48	snR48	CTT1	P06115	562 aa		1	□□□□□ -2.25
snR48	snR48	GPA1	P08539	472 aa		1	□□□□□ -2.25
snR48	snR48	PGI1	P12709	554 aa	Known RBP	1	□□□□□ -2.25
snR48	snR48	GLN3	P18494	730 aa		1	□□□□□ -2.25
snR48	snR48	YPK3	P38070	525 aa		1	□□□□□ -2.25
snR48	snR48	MDM31	P38880	579 aa		1	□□□□□ -2.25
snR48	snR48	YJL068C	P40363	299 aa		1	□□□□□ -2.25
snR48	snR48	YIR014W	P40570	242 aa		1	□□□□□ -2.25
snR48	snR48	UBX6	P47049	396 aa		1	□□□□□ -2.25
snR48	snR48	ASK10	P48361	1146 aa		1	□□□□□ -2.25
snR48	snR48	MNT2	P53059	558 aa		1	□□□□□ -2.25
snR48	snR48	MCP2	Q06567	569 aa		1	□□□□□ -2.25
snR48	snR48	YLR049C	Q12110	428 aa		1	□□□□□ -2.25
snR48	snR48	COX1	P00401	534 aa		0.99	□□□□□ -2.25
snR48	snR48	GDH1	P07262	454 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	RPL8A	P17076	256 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	LAC1	P28496	418 aa		0.99	□□□□□ -2.25
snR48	snR48	PET309	P32522	965 aa	Predicted RBP	0.99	□□□□□ -2.25
snR48	snR48	PRS1	P32895	427 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	SER1	P33330	395 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	RTS1	P38903	757 aa		0.99	□□□□□ -2.25
snR48	snR48	FUN12	P39730	1002 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	ARB1	P40024	610 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	VFA1	P40080	203 aa		0.99	□□□□□ -2.25
snR48	snR48	IRC5	P43610	853 aa		0.99	□□□□□ -2.25
snR48	snR48	RNY1	Q02933	434 aa	Known RBP	0.99	□□□□□ -2.25
snR48	snR48	EKI1	Q03764	534 aa		0.99	□□□□□ -2.25
snR48	snR48	THI73	Q07904	523 aa		0.99	□□□□□ -2.25
snR48	snR48	CWC2	Q12046	339 aa	Predicted RBP	0.99	□□□□□ -2.25
snR48	snR48	YPR027C	Q12079	277 aa		0.99	□□□□□ -2.25
snR48	snR48	RPS7A	P26786	190 aa	Known RBP	0.98	□□□□□ -2.25
snR48	snR48	PRP45	P28004	379 aa	Predicted RBP	0.98	□□□□□ -2.25
snR48	snR48	LEU5	P38702	357 aa		0.98	□□□□□ -2.25
snR48	snR48	YDR109C	Q04585	715 aa		0.98	□□□□□ -2.25
snR48	snR48	RSF1	Q05043	376 aa		0.98	□□□□□ -2.25
snR48	snR48	MRP2	P10663	115 aa	Predicted RBP	0.97	□□□□□ -2.25
snR48	snR48	PDE1	P22434	369 aa		0.97	□□□□□ -2.25
snR48	snR48	AGA1	P32323	725 aa		0.97	□□□□□ -2.25
snR48	snR48	DAL3	P32459	195 aa		0.97	□□□□□ -2.25
snR48	snR48	YEL045C	P32616	141 aa		0.97	□□□□□ -2.25
snR48	snR48	EAF5	P39995	279 aa		0.97	□□□□□ -2.25
snR48	snR48	RTS2	P40962	232 aa		0.97	□□□□□ -2.25
snR48	snR48	IAH1	P41734	238 aa		0.97	□□□□□ -2.25
snR48	snR48	OSW7	P43611	510 aa		0.97	□□□□□ -2.25
snR48	snR48	YRB30	P53107	440 aa	Predicted RBP	0.97	□□□□□ -2.25
snR48	snR48	SGF73	P53165	657 aa		0.97	□□□□□ -2.25
snR48	snR48	YGL039W	P53183	348 aa	Known RBP	0.97	□□□□□ -2.25
snR48	snR48	CTL1	Q03220	320 aa	Known RBP	0.97	□□□□□ -2.25
snR48	snR48	TAF7	Q05021	590 aa		0.97	□□□□□ -2.25
snR48	snR48	PAL1	Q05518	499 aa	Known RBP	0.97	□□□□□ -2.25
snR48	snR48	RTK1	Q12100	620 aa	Predicted RBP	0.97	□□□□□ -2.25
snR48	snR48	NOP14	Q99207	810 aa	Known RBP	0.97	□□□□□ -2.25
snR48	snR48	ADR1	P07248	1323 aa		0.96	□□□□□ -2.26
snR48	snR48	MSN2	P33748	704 aa		0.96	□□□□□ -2.26
snR48	snR48	YBP1	P38315	674 aa		0.96	□□□□□ -2.26
snR48	snR48	SEC31	P38968	1273 aa	Known RBP	0.96	□□□□□ -2.26
snR48	snR48	YJL132W	P47014	750 aa		0.96	□□□□□ -2.26
snR48	snR48	YGL081W	P53156	320 aa		0.96	□□□□□ -2.26
snR48	snR48	YNR071C	P53757	342 aa		0.96	□□□□□ -2.26
snR48	snR48	YNL034W	P53963	612 aa		0.96	□□□□□ -2.26
snR48	snR48	YMR178W	Q03219	274 aa	Known RBP	0.96	□□□□□ -2.26
snR48	snR48	TRS31	Q03337	283 aa		0.96	□□□□□ -2.26
snR48	snR48	TMC1	Q08422	150 aa	Predicted RBP	0.96	□□□□□ -2.26
snR48	snR48	STV1	P37296	890 aa		0.95	□□□□□ -2.26
snR48	snR48	EMP65	P40085	556 aa		0.95	□□□□□ -2.26
snR48	snR48	YJL213W	P40896	331 aa		0.95	□□□□□ -2.26
snR48	snR48	DIM1	P41819	318 aa	Known RBP	0.95	□□□□□ -2.26
snR48	snR48	YDL186W	P48568	277 aa		0.95	□□□□□ -2.26
snR48	snR48	YLR455W	Q06188	304 aa		0.95	□□□□□ -2.26
snR48	snR48	MRS3	P10566	314 aa		0.94	□□□□□ -2.26
snR48	snR48	MAD2	P40958	196 aa		0.94	□□□□□ -2.26
snR48	snR48	YGR079W	P53249	370 aa		0.94	□□□□□ -2.26
snR48	snR48	ASI1	P54074	624 aa		0.94	□□□□□ -2.26
snR48	snR48	UME1	Q03010	460 aa		0.94	□□□□□ -2.26
snR48	snR48	PFA5	Q03289	374 aa		0.94	□□□□□ -2.26
snR48	snR48	SKY1	Q03656	742 aa		0.94	□□□□□ -2.26
snR48	snR48	ARP10	Q04549	284 aa		0.94	□□□□□ -2.26
snR48	snR48	YOL159C	Q08300	171 aa		0.94	□□□□□ -2.26
snR48	snR48	RMP1	Q12530	201 aa		0.94	□□□□□ -2.26
snR48	snR48	EDE1	P34216	1381 aa		0.94	□□□□□ -2.26
snR48	snR48	NUP145	P49687	1317 aa		0.93	□□□□□ -2.26
snR48	snR48	RPB8	P20436	146 aa		0.93	□□□□□ -2.26
snR48	snR48	ERG1	P32476	496 aa	Known RBP	0.93	□□□□□ -2.26
snR48	snR48	MIC60	P36112	540 aa		0.93	□□□□□ -2.26
snR48	snR48	STL1	P39932	569 aa		0.93	□□□□□ -2.26
snR48	snR48	RPT2	P40327	437 aa	Known RBP	0.93	□□□□□ -2.26
snR48	snR48	FET5	P43561	622 aa		0.93	□□□□□ -2.26
snR48	snR48	POL31	P46957	487 aa		0.93	□□□□□ -2.26
snR48	snR48	DNM1	P54861	757 aa		0.93	□□□□□ -2.26
snR48	snR48	DBP10	Q12389	995 aa	Known RBP	0.93	□□□□□ -2.26
snR48	snR48	YBR255C-A	Q3E776	120 aa		0.93	□□□□□ -2.26
snR48	snR48	MCK1	P21965	375 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	ATS1	P31386	333 aa		0.92	□□□□□ -2.26
snR48	snR48	ERG7	P38604	731 aa		0.92	□□□□□ -2.26
snR48	snR48	RFC1	P38630	861 aa	Known RBP	0.92	□□□□□ -2.26
snR48	snR48	RRP3	P38712	501 aa	Known RBP	0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms