RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W HLJ1P48353 224 aa5.22□□□□□ -1.57
SSO1YPL232W SIZ1Q04195 904 aa5.22□□□□□ -1.57
SSO1YPL232W VMS1Q04311 632 aaKnown RBP5.22□□□□□ -1.57
SSO1YPL232W YDR222WQ04925 415 aa5.22□□□□□ -1.57
SSO1YPL232W FMP45Q07651 309 aa5.22□□□□□ -1.57
SSO1YPL232W SEC16P48415 2195 aaKnown RBP5.22□□□□□ -1.57
SSO1YPL232W CDC37P06101 506 aaKnown RBP5.21□□□□□ -1.58
SSO1YPL232W CLC1P17891 233 aa5.21□□□□□ -1.58
SSO1YPL232W RBK1P25332 333 aa5.21□□□□□ -1.58
SSO1YPL232W NUD1P32336 851 aa5.21□□□□□ -1.58
SSO1YPL232W ELM1P32801 640 aa5.21□□□□□ -1.58
SSO1YPL232W AIM26P32858 118 aa5.21□□□□□ -1.58
SSO1YPL232W NIP100P33420 868 aa5.21□□□□□ -1.58
SSO1YPL232W SQT1P35184 431 aa5.21□□□□□ -1.58
SSO1YPL232W MTG2P38860 518 aa5.21□□□□□ -1.58
SSO1YPL232W ERP2P39704 215 aa5.21□□□□□ -1.58
SSO1YPL232W SLX8P40072 274 aa5.21□□□□□ -1.58
SSO1YPL232W RRT5P43607 289 aa5.21□□□□□ -1.58
SSO1YPL232W BUD13P46947 266 aaPredicted RBP5.21□□□□□ -1.58
SSO1YPL232W STR3P53101 465 aaKnown RBP5.21□□□□□ -1.58
SSO1YPL232W YNL092WP53934 400 aa5.21□□□□□ -1.58
SSO1YPL232W CDC55Q00362 526 aa5.21□□□□□ -1.58
SSO1YPL232W PEX25Q02969 394 aa5.21□□□□□ -1.58
SSO1YPL232W CDA1Q06702 301 aa5.21□□□□□ -1.58
SSO1YPL232W YLR030WQ07967 263 aa5.21□□□□□ -1.58
SSO1YPL232W BUD20Q08004 166 aaPredicted RBP5.21□□□□□ -1.58
SSO1YPL232W PGC1Q08959 321 aa5.21□□□□□ -1.58
SSO1YPL232W PFA4Q12006 378 aa5.21□□□□□ -1.58
SSO1YPL232W FRT1Q99332 602 aa5.21□□□□□ -1.58
SSO1YPL232W IZH4Q99393 312 aa5.21□□□□□ -1.58
SSO1YPL232W EPT1P22140 391 aa5.2□□□□□ -1.58
SSO1YPL232W SIN4P32259 974 aa5.2□□□□□ -1.58
SSO1YPL232W RRN6P32786 894 aa5.2□□□□□ -1.58
SSO1YPL232W SKN1P33336 771 aa5.2□□□□□ -1.58
SSO1YPL232W DED81P38707 554 aaKnown RBP5.2□□□□□ -1.58
SSO1YPL232W STN1P38960 494 aa5.2□□□□□ -1.58
SSO1YPL232W TMN3P40071 706 aa5.2□□□□□ -1.58
SSO1YPL232W LRO1P40345 661 aa5.2□□□□□ -1.58
SSO1YPL232W MNN11P46985 422 aaKnown RBP5.2□□□□□ -1.58
SSO1YPL232W STR2P47164 639 aa5.2□□□□□ -1.58
SSO1YPL232W ASK10P48361 1146 aa5.2□□□□□ -1.58
SSO1YPL232W RIM21P48565 533 aa5.2□□□□□ -1.58
SSO1YPL232W COG1P53079 417 aa5.2□□□□□ -1.58
SSO1YPL232W ARP4P80428 489 aa5.2□□□□□ -1.58
SSO1YPL232W EMI1Q04406 187 aa5.2□□□□□ -1.58
SSO1YPL232W YPR078CQ06813 372 aa5.2□□□□□ -1.58
SSO1YPL232W CWC2Q12046 339 aaPredicted RBP5.2□□□□□ -1.58
SSO1YPL232W RRP12Q12754 1228 aaKnown RBP5.2□□□□□ -1.58
SSO1YPL232W NHA1Q99271 985 aa5.2□□□□□ -1.58
SSO1YPL232W COX5AP00424 153 aa5.19□□□□□ -1.58
SSO1YPL232W SEC62P21825 274 aa5.19□□□□□ -1.58
SSO1YPL232W TRX1P22217 103 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W PHO84P25297 587 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W PLC1P32383 869 aa5.19□□□□□ -1.58
SSO1YPL232W HOG1P32485 435 aa5.19□□□□□ -1.58
SSO1YPL232W AEP1P32493 518 aa5.19□□□□□ -1.58
SSO1YPL232W PET112P33893 541 aa5.19□□□□□ -1.58
SSO1YPL232W YET1P35723 206 aa5.19□□□□□ -1.58
SSO1YPL232W PHO11P35842 467 aa5.19□□□□□ -1.58
SSO1YPL232W MIA40P36046 403 aa5.19□□□□□ -1.58
SSO1YPL232W ADE17P38009 592 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W BIT2P38346 545 aa5.19□□□□□ -1.58
SSO1YPL232W PHO12P38693 467 aa5.19□□□□□ -1.58
SSO1YPL232W AIM18P38884 321 aa5.19□□□□□ -1.58
SSO1YPL232W CYC2P38909 366 aa5.19□□□□□ -1.58
SSO1YPL232W ELO3P40319 345 aa5.19□□□□□ -1.58
SSO1YPL232W ATM1P40416 690 aa5.19□□□□□ -1.58
SSO1YPL232W HYR1P40581 163 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W CSN12P47130 423 aa5.19□□□□□ -1.58
SSO1YPL232W TAD1P53065 400 aa5.19□□□□□ -1.58
SSO1YPL232W YGR111WP53265 400 aa5.19□□□□□ -1.58
SSO1YPL232W VPS9P54787 451 aa5.19□□□□□ -1.58
SSO1YPL232W RHO3Q00245 231 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W REG1Q00816 1014 aa5.19□□□□□ -1.58
SSO1YPL232W ENT5Q03769 411 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W MSH6Q03834 1242 aa5.19□□□□□ -1.58
SSO1YPL232W ERV41Q04651 352 aa5.19□□□□□ -1.58
SSO1YPL232W GFD1Q04839 188 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W CIA1Q05583 330 aa5.19□□□□□ -1.58
SSO1YPL232W NEW1Q08972 1196 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W SMF3Q12078 473 aaPredicted RBP5.19□□□□□ -1.58
SSO1YPL232W EFG1Q3E705 233 aaKnown RBP5.19□□□□□ -1.58
SSO1YPL232W AI5_ALPHAQ9ZZX1 630 aa5.19□□□□□ -1.58
SSO1YPL232W CDC9P04819 755 aa5.18□□□□□ -1.58
SSO1YPL232W APA1P16550 321 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W TUP1P16649 713 aa5.18□□□□□ -1.58
SSO1YPL232W YSR3P23501 404 aa5.18□□□□□ -1.58
SSO1YPL232W ADH7P25377 361 aa5.18□□□□□ -1.58
SSO1YPL232W EMC1P25574 760 aa5.18□□□□□ -1.58
SSO1YPL232W PET309P32522 965 aaPredicted RBP5.18□□□□□ -1.58
SSO1YPL232W SPS19P32573 292 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W MRS6P32864 603 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W EMC3P36039 253 aa5.18□□□□□ -1.58
SSO1YPL232W GMH1P36125 273 aa5.18□□□□□ -1.58
SSO1YPL232W CTP1P38152 299 aa5.18□□□□□ -1.58
SSO1YPL232W DBP8P38719 431 aa5.18□□□□□ -1.58
SSO1YPL232W YHL008CP38750 627 aa5.18□□□□□ -1.58
SSO1YPL232W MIP6P38760 659 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W LYS1P38998 373 aaRIP-Chip data5.18□□□□□ -1.58not detected
SSO1YPL232W CCT5P40413 562 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms