RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP16	YPL072W	URK1	P27515	501 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	MET30	P39014	640 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	VPS25	P47142	202 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	UBP8	P50102	471 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	ATG21	Q02887	496 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	CAC2	Q04199	468 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	YDR109C	Q04585	715 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	YOL114C	Q12322	202 aa		3.15	□□□□□ -1.9
UBP16	YPL072W	MCM3	P24279	971 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	BUD16	P39988	312 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	PCL6	P40038	420 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	YIL169C	P40442	995 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	MSY1	P48527	492 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	SWF1	Q04629	336 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	EIS1	Q05050	843 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	BAG7	Q12128	409 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	RPL42A	P0CX27	106 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	RPL42B	P0CX28	106 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	BIK1	P11709	440 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	SST2	P11972	698 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	SWE1	P32944	819 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	VPS24	P36095	224 aa	Known RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	TEP1	P53916	434 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	ATG16	Q03818	150 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	YLR281C	Q05863	155 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	IWR1	Q07532	353 aa	Predicted RBP	3.14	□□□□□ -1.91
UBP16	YPL072W	SUL2	Q12325	893 aa		3.14	□□□□□ -1.91
UBP16	YPL072W	POL3	P15436	1097 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	RIT1	P23796	513 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	YCR006C	P25350	157 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	RTT107	P38850	1070 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	QRI7	P43122	407 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	YGL036W	P53185	909 aa	Predicted RBP	3.13	□□□□□ -1.91
UBP16	YPL072W	TAM41	P53230	385 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	BET4	Q00618	327 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	MTG1	Q03151	367 aa	Predicted RBP	3.13	□□□□□ -1.91
UBP16	YPL072W	ECM16	Q04217	1267 aa	Known RBP	3.13	□□□□□ -1.91
UBP16	YPL072W	ATG23	Q06671	453 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	POS5	Q06892	414 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	NRT1	Q08485	598 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	BUD21	Q08492	214 aa	Predicted RBP	3.13	□□□□□ -1.91
UBP16	YPL072W	MPD2	Q99316	277 aa		3.13	□□□□□ -1.91
UBP16	YPL072W	ADE3	P07245	946 aa	Known RBP	3.12	□□□□□ -1.91
UBP16	YPL072W	PET122	P10355	254 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	MRP2	P10663	115 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP16	YPL072W	PCT1	P13259	424 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	PTH2	P34222	208 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	YKL133C	P36066	463 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	MNN2	P38069	597 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	RKM3	P38222	552 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	DJP1	P40564	432 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	SKP2	P42843	763 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	IMA1	P53051	589 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	ECI1	Q05871	280 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	FRE3	Q08905	711 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	YLR112W	Q12130	139 aa		3.12	□□□□□ -1.91
UBP16	YPL072W	GPA1	P08539	472 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	TRX2	P22803	104 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	MRS6	P32864	603 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	APM3	P38153	483 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	ASG1	P40467	964 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	PAP2	P53632	584 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	CPR6	P53691	371 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	ADE16	P54113	591 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	UBX4	P54730	416 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	DIG1	Q03063	452 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	IZH1	Q03419	316 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	ARP9	Q05123	467 aa		3.11	□□□□□ -1.91
UBP16	YPL072W	BRE1	Q07457	700 aa	Known RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	GPN2	Q08726	347 aa	Predicted RBP	3.11	□□□□□ -1.91
UBP16	YPL072W	PIF1	P07271	859 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	SUI3	P09064	285 aa	Known RBP	3.1	□□□□□ -1.91
UBP16	YPL072W	SWI4	P25302	1093 aa	Known RBP	3.1	□□□□□ -1.91
UBP16	YPL072W	PTP2	P29461	750 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	ARP2	P32381	391 aa	Known RBP	3.1	□□□□□ -1.91
UBP16	YPL072W	FUI1	P38196	639 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	SAD1	P43589	448 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	MET14	Q02196	202 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	YLR455W	Q06188	304 aa		3.1	□□□□□ -1.91
UBP16	YPL072W	MIS1	P09440	975 aa	Known RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	YML003W	P0CF16	290 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	PGI1	P12709	554 aa	Known RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	YSP3	P25036	478 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	LRE1	P25579	583 aa	Known RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	RFA2	P26754	273 aa	Known RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	GCD7	P32502	381 aa	Predicted RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	YND1	P40009	630 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	VRG4	P40107	337 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	YGL260W	P53056	76 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	MOT3	P54785	490 aa	Known RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	YTH1	Q06102	208 aa	Predicted RBP	3.09	□□□□□ -1.91
UBP16	YPL072W	MLC2	Q06580	163 aa		3.09	□□□□□ -1.91
UBP16	YPL072W	YER145C-A	A0A023PYF4	145 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	PHO2	P07269	559 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	FSH1	P38777	243 aa	Known RBP	3.09	□□□□□ -1.92
UBP16	YPL072W	YGR021W	P53212	290 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	FMP42	Q04991	504 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	YDL121C	Q07541	149 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	YLR049C	Q12110	428 aa		3.09	□□□□□ -1.92
UBP16	YPL072W	RRP6	Q12149	733 aa	Known RBP	3.09	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms