RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W YBR255C-AQ3E776 120 aa2.36□□□□□ -2.03
RRP6YOR001W YKL033W-AQ86ZR7 236 aa2.36□□□□□ -2.03
RRP6YOR001W PWP1P21304 576 aaKnown RBP2.35□□□□□ -2.03
RRP6YOR001W SEC15P22224 910 aa2.35□□□□□ -2.03
RRP6YOR001W POL4P25615 582 aa2.35□□□□□ -2.03
RRP6YOR001W VPH1P32563 840 aaKnown RBP2.35□□□□□ -2.03
RRP6YOR001W SRB5P32585 307 aa2.35□□□□□ -2.03
RRP6YOR001W ORC2P32833 620 aa2.35□□□□□ -2.03
RRP6YOR001W AIM3P38266 947 aaKnown RBP2.35□□□□□ -2.03
RRP6YOR001W SMF1P38925 575 aa2.35□□□□□ -2.03
RRP6YOR001W FMP52P40008 231 aa2.35□□□□□ -2.03
RRP6YOR001W JEM1P40358 645 aa2.35□□□□□ -2.03
RRP6YOR001W YJL068CP40363 299 aa2.35□□□□□ -2.03
RRP6YOR001W RIM8P53179 542 aa2.35□□□□□ -2.03
RRP6YOR001W YGR079WP53249 370 aa2.35□□□□□ -2.03
RRP6YOR001W INA17Q02888 182 aa2.35□□□□□ -2.03
RRP6YOR001W YML119WQ03208 357 aa2.35□□□□□ -2.03
RRP6YOR001W DLT1Q04216 342 aa2.35□□□□□ -2.03
RRP6YOR001W ARP9Q05123 467 aa2.35□□□□□ -2.03
RRP6YOR001W YDR286CQ05530 114 aa2.35□□□□□ -2.03
RRP6YOR001W MRI1Q06489 411 aaKnown RBP2.35□□□□□ -2.03
RRP6YOR001W FRE5Q08908 694 aa2.35□□□□□ -2.03
RRP6YOR001W RCN2Q12044 265 aa2.35□□□□□ -2.03
RRP6YOR001W SWT1Q12104 458 aa2.35□□□□□ -2.03
RRP6YOR001W HUA2Q12134 243 aa2.35□□□□□ -2.03
RRP6YOR001W YPT6Q99260 215 aa2.35□□□□□ -2.03
RRP6YOR001W PMS1P14242 873 aa2.34□□□□□ -2.03
RRP6YOR001W STE4P18851 423 aa2.34□□□□□ -2.03
RRP6YOR001W KGD2P19262 463 aaPredicted RBP2.34□□□□□ -2.03
RRP6YOR001W SRP54P20424 541 aaKnown RBP2.34□□□□□ -2.03
RRP6YOR001W RFA2P26754 273 aaKnown RBP2.34□□□□□ -2.03
RRP6YOR001W SAS3P34218 831 aa2.34□□□□□ -2.03
RRP6YOR001W YKL100CP34248 587 aa2.34□□□□□ -2.03
RRP6YOR001W ERC1P38767 581 aa2.34□□□□□ -2.03
RRP6YOR001W PES4P39684 611 aa2.34□□□□□ -2.03
RRP6YOR001W IME4P41833 600 aa2.34□□□□□ -2.03
RRP6YOR001W ROK1P45818 564 aaPredicted RBP2.34□□□□□ -2.03
RRP6YOR001W LCL3P53153 274 aa2.34□□□□□ -2.03
RRP6YOR001W ERO1Q03103 563 aa2.34□□□□□ -2.03
RRP6YOR001W ATG23Q06671 453 aa2.34□□□□□ -2.03
RRP6YOR001W YEH1Q07804 573 aa2.34□□□□□ -2.03
RRP6YOR001W BUD7Q08754 746 aa2.34□□□□□ -2.03
RRP6YOR001W PRP6P19735 899 aaPredicted RBP2.34□□□□□ -2.04
RRP6YOR001W FUB1P25659 250 aa2.34□□□□□ -2.04
RRP6YOR001W GPI10P30777 616 aa2.34□□□□□ -2.04
RRP6YOR001W SWC3P31376 625 aa2.34□□□□□ -2.04
RRP6YOR001W DBF4P32325 704 aa2.34□□□□□ -2.04
RRP6YOR001W THI80P35202 319 aa2.34□□□□□ -2.04
RRP6YOR001W AUR1P36107 401 aaPredicted RBP2.34□□□□□ -2.04
RRP6YOR001W MNN2P38069 597 aa2.34□□□□□ -2.04
RRP6YOR001W CST26P38226 397 aa2.34□□□□□ -2.04
RRP6YOR001W RTS1P38903 757 aa2.34□□□□□ -2.04
RRP6YOR001W BUD17P53727 317 aa2.34□□□□□ -2.04
RRP6YOR001W BNI5P53890 448 aaKnown RBP2.34□□□□□ -2.04
RRP6YOR001W RPA49Q01080 415 aaPredicted RBP2.34□□□□□ -2.04
RRP6YOR001W RPT6Q01939 405 aaKnown RBP2.34□□□□□ -2.04
RRP6YOR001W ERB1Q04660 807 aaKnown RBP2.34□□□□□ -2.04
RRP6YOR001W MRD1Q06106 887 aaKnown RBP2.34□□□□□ -2.04
RRP6YOR001W RTT109Q07794 436 aa2.34□□□□□ -2.04
RRP6YOR001W NUS1Q12063 375 aa2.34□□□□□ -2.04
RRP6YOR001W USV1Q12132 391 aa2.34□□□□□ -2.04
RRP6YOR001W SPT7P35177 1332 aa2.33□□□□□ -2.04
RRP6YOR001W STE11P23561 717 aa2.33□□□□□ -2.04
RRP6YOR001W URA7P28274 579 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W NTH1P32356 751 aa2.33□□□□□ -2.04
RRP6YOR001W GCS1P35197 352 aa2.33□□□□□ -2.04
RRP6YOR001W MAL33P38157 468 aa2.33□□□□□ -2.04
RRP6YOR001W YBL029WP38201 376 aa2.33□□□□□ -2.04
RRP6YOR001W NPA3P47122 385 aa2.33□□□□□ -2.04
RRP6YOR001W MSY1P48527 492 aa2.33□□□□□ -2.04
RRP6YOR001W YIP4P53093 235 aa2.33□□□□□ -2.04
RRP6YOR001W RMT2Q03305 412 aa2.33□□□□□ -2.04
RRP6YOR001W ARX1Q03862 593 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W YSH1Q06224 779 aaPredicted RBP2.33□□□□□ -2.04
RRP6YOR001W SKG3Q06315 1026 aa2.33□□□□□ -2.04
RRP6YOR001W YDL242WQ07746 117 aa2.33□□□□□ -2.04
RRP6YOR001W PGC1Q08959 321 aa2.33□□□□□ -2.04
RRP6YOR001W RKI1Q12189 258 aa2.33□□□□□ -2.04
RRP6YOR001W YJR112W-AQ3E743 109 aa2.33□□□□□ -2.04
RRP6YOR001W PMA1P05030 918 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W ARD1P07347 238 aaPredicted RBP2.33□□□□□ -2.04
RRP6YOR001W MET3P08536 511 aa2.33□□□□□ -2.04
RRP6YOR001W PRE8P23639 250 aa2.33□□□□□ -2.04
RRP6YOR001W CNE1P27825 502 aa2.33□□□□□ -2.04
RRP6YOR001W PUP2P32379 260 aa2.33□□□□□ -2.04
RRP6YOR001W PDB1P32473 366 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W TOD6P34219 525 aa2.33□□□□□ -2.04
RRP6YOR001W STB6P36085 766 aa2.33□□□□□ -2.04
RRP6YOR001W CCL1P37366 393 aa2.33□□□□□ -2.04
RRP6YOR001W RXT2P38255 430 aa2.33□□□□□ -2.04
RRP6YOR001W YIL161WP40449 235 aaKnown RBP2.33□□□□□ -2.04
RRP6YOR001W CTK2P46962 323 aa2.33□□□□□ -2.04
RRP6YOR001W YGR151CP53287 111 aa2.33□□□□□ -2.04
RRP6YOR001W DIP5P53388 608 aa2.33□□□□□ -2.04
RRP6YOR001W CIK1Q01649 594 aa2.33□□□□□ -2.04
RRP6YOR001W YML037CQ03703 340 aa2.33□□□□□ -2.04
RRP6YOR001W YDL086WQ07505 273 aa2.33□□□□□ -2.04
RRP6YOR001W YOL159CQ08300 171 aa2.33□□□□□ -2.04
RRP6YOR001W YPL191CQ08930 360 aa2.33□□□□□ -2.04
RRP6YOR001W LCB4Q12246 624 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms