RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YMR111CQ04461 462 aaPredicted RBP3.28□□□□□ -1.88
MSH2YOL090W VBA4Q04602 768 aaKnown RBP3.28□□□□□ -1.88
MSH2YOL090W YLL054CQ12244 843 aa3.28□□□□□ -1.88
MSH2YOL090W TY1A-NL1Q12391 440 aaKnown RBP3.28□□□□□ -1.88
MSH2YOL090W FBP1P09201 348 aa3.28□□□□□ -1.88
MSH2YOL090W ERG8P24521 451 aa3.28□□□□□ -1.88
MSH2YOL090W YCR051WP25631 222 aa3.28□□□□□ -1.88
MSH2YOL090W YEL043WP32618 956 aa3.28□□□□□ -1.88
MSH2YOL090W CTM1P38818 585 aa3.28□□□□□ -1.88
MSH2YOL090W BFR1P38934 470 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88 RIP-Chip
MSH2YOL090W ATF1P40353 525 aa3.28□□□□□ -1.88
MSH2YOL090W SSU1P41930 458 aa3.28□□□□□ -1.88
MSH2YOL090W GSM1P42950 618 aa3.28□□□□□ -1.88
MSH2YOL090W OGG1P53397 376 aaPredicted RBP3.28□□□□□ -1.88
MSH2YOL090W DUS1P53759 423 aaKnown RBP3.28□□□□□ -1.88
MSH2YOL090W RPA49Q01080 415 aaPredicted RBP3.28□□□□□ -1.88
MSH2YOL090W HPF1Q05164 967 aa3.28□□□□□ -1.88
MSH2YOL090W SPH1Q06160 661 aa3.28□□□□□ -1.88
MSH2YOL090W DBP9Q06218 594 aaKnown RBP3.28□□□□□ -1.88
MSH2YOL090W NOP6Q07623 225 aaKnown RBP3.28□□□□□ -1.88
MSH2YOL090W VCX1Q99385 411 aa3.28□□□□□ -1.88
MSH2YOL090W ADE2P21264 571 aaKnown RBP3.27□□□□□ -1.89
MSH2YOL090W PWP1P21304 576 aaKnown RBP3.27□□□□□ -1.89
MSH2YOL090W CPR2P23285 205 aa3.27□□□□□ -1.89
MSH2YOL090W SRP101P32916 621 aa3.27□□□□□ -1.89
MSH2YOL090W LOT5P34234 306 aa3.27□□□□□ -1.89
MSH2YOL090W LRG1P35688 1017 aa3.27□□□□□ -1.89
MSH2YOL090W SWH1P35845 1188 aa3.27□□□□□ -1.89
MSH2YOL090W POL12P38121 705 aaPredicted RBP3.27□□□□□ -1.89
MSH2YOL090W THI2P38141 450 aa3.27□□□□□ -1.89
MSH2YOL090W MPT5P39016 859 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
MSH2YOL090W GID8P40208 455 aa3.27□□□□□ -1.89
MSH2YOL090W CAB2P40506 365 aa3.27□□□□□ -1.89
MSH2YOL090W LAM5P43560 674 aa3.27□□□□□ -1.89
MSH2YOL090W GCV2P49095 1034 aa3.27□□□□□ -1.89
MSH2YOL090W GLO1P50107 326 aa3.27□□□□□ -1.89
MSH2YOL090W LCL3P53153 274 aa3.27□□□□□ -1.89
MSH2YOL090W ORC4P54791 529 aa3.27□□□□□ -1.89
MSH2YOL090W SDH1Q00711 640 aa3.27□□□□□ -1.89
MSH2YOL090W ADA2Q02336 434 aa3.27□□□□□ -1.89
MSH2YOL090W VTC3Q02725 835 aa3.27□□□□□ -1.89
MSH2YOL090W EFR3Q03653 782 aaKnown RBP3.27□□□□□ -1.89
MSH2YOL090W YPL272CQ08984 517 aa3.27□□□□□ -1.89
MSH2YOL090W SAC3P46674 1301 aa3.27□□□□□ -1.89
MSH2YOL090W PRE4P30657 266 aa3.27□□□□□ -1.89
MSH2YOL090W ALY1P36117 915 aa3.27□□□□□ -1.89
MSH2YOL090W CST26P38226 397 aa3.27□□□□□ -1.89
MSH2YOL090W YHR033WP38690 423 aa3.27□□□□□ -1.89
MSH2YOL090W CCT6P39079 546 aa3.27□□□□□ -1.89
MSH2YOL090W JHD1P40034 492 aa3.27□□□□□ -1.89
MSH2YOL090W AAD10P47182 288 aa3.27□□□□□ -1.89
MSH2YOL090W ENP2P48234 707 aaKnown RBP3.27□□□□□ -1.89
MSH2YOL090W TAF4P50105 388 aa3.27□□□□□ -1.89
MSH2YOL090W EXG2P52911 562 aa3.27□□□□□ -1.89
MSH2YOL090W YMR074CQ04773 145 aa3.27□□□□□ -1.89
MSH2YOL090W STP3Q05937 343 aa3.27□□□□□ -1.89
MSH2YOL090W HRK1Q08732 759 aaKnown RBP3.27□□□□□ -1.89
MSH2YOL090W YSP2Q06681 1438 aa3.27□□□□□ -1.89
MSH2YOL090W RPS9AO13516 197 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W YLR358CO13565 187 aa3.26□□□□□ -1.89
MSH2YOL090W CTT1P06115 562 aa3.26□□□□□ -1.89
MSH2YOL090W MSP1P28737 362 aa3.26□□□□□ -1.89
MSH2YOL090W RPT5P33297 434 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W ATG19P35193 415 aa3.26□□□□□ -1.89
MSH2YOL090W KSP1P38691 1029 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W SLN1P39928 1220 aaPredicted RBP3.26□□□□□ -1.89
MSH2YOL090W RRT14P40470 206 aa3.26□□□□□ -1.89
MSH2YOL090W IST3P40565 148 aaPredicted RBP3.26□□□□□ -1.89
MSH2YOL090W MKT1P40850 830 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W NUP84P52891 726 aa3.26□□□□□ -1.89
MSH2YOL090W ALT2P52892 507 aa3.26□□□□□ -1.89
MSH2YOL090W PDR16P53860 351 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W RRN5Q02983 363 aa3.26□□□□□ -1.89
MSH2YOL090W ABZ2Q03266 374 aa3.26□□□□□ -1.89
MSH2YOL090W VPS36Q06696 566 aa3.26□□□□□ -1.89
MSH2YOL090W AIM6Q07716 390 aa3.26□□□□□ -1.89
MSH2YOL090W ELG1Q12050 791 aa3.26□□□□□ -1.89
MSH2YOL090W RTC5Q12108 567 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W UPC2Q12151 913 aa3.26□□□□□ -1.89
MSH2YOL090W AFI1Q99222 893 aa3.26□□□□□ -1.89
MSH2YOL090W RPL1AP0CX43 217 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W RPL1BP0CX44 217 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W ARO3P14843 370 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W CLB3P24870 427 aa3.26□□□□□ -1.89
MSH2YOL090W DAD2P36162 133 aa3.26□□□□□ -1.89
MSH2YOL090W YBL029WP38201 376 aa3.26□□□□□ -1.89
MSH2YOL090W MTG2P38860 518 aa3.26□□□□□ -1.89
MSH2YOL090W MUB1Q03162 620 aa3.26□□□□□ -1.89
MSH2YOL090W SOV1Q04748 898 aa3.26□□□□□ -1.89
MSH2YOL090W MRD1Q06106 887 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W NBP2Q12163 236 aa3.26□□□□□ -1.89
MSH2YOL090W HOS1Q12214 470 aa3.26□□□□□ -1.89
MSH2YOL090W RPP1AP05318 106 aaPredicted RBP3.26□□□□□ -1.89
MSH2YOL090W FRS1P15624 595 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W RPC82P32349 654 aa3.26□□□□□ -1.89
MSH2YOL090W YDR089WP38966 869 aa3.26□□□□□ -1.89
MSH2YOL090W YNL195CP40168 261 aa3.26□□□□□ -1.89
MSH2YOL090W PFK26P40433 827 aaKnown RBP3.26□□□□□ -1.89
MSH2YOL090W DOT5P40553 215 aa3.26□□□□□ -1.89
MSH2YOL090W VPS4P52917 437 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms