RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeastyeast

Gene CWC25, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC25YNL245C SIP1P32578 815 aa6.25□□□□□ -1.41
CWC25YNL245C NUP120P35729 1037 aa6.25□□□□□ -1.41
CWC25YNL245C TEF4P36008 412 aaKnown RBP6.25□□□□□ -1.41
CWC25YNL245C COG1P53079 417 aa6.25□□□□□ -1.41
CWC25YNL245C IMO32P53219 342 aa6.25□□□□□ -1.41
CWC25YNL245C YMR018WQ04364 514 aa6.25□□□□□ -1.41
CWC25YNL245C DOP1Q03921 1698 aa6.24□□□□□ -1.41
CWC25YNL245C ATP2P00830 511 aaKnown RBP6.24□□□□□ -1.41
CWC25YNL245C RER1P25560 188 aa6.24□□□□□ -1.41
CWC25YNL245C ADY2P25613 283 aa6.24□□□□□ -1.41
CWC25YNL245C MCM10P32354 571 aa6.24□□□□□ -1.41
CWC25YNL245C AXL2P38928 823 aa6.24□□□□□ -1.41
CWC25YNL245C PSP1P50896 841 aaKnown RBP6.24□□□□□ -1.41
CWC25YNL245C YGR079WP53249 370 aa6.24□□□□□ -1.41
CWC25YNL245C RAD33Q04231 177 aa6.24□□□□□ -1.41
CWC25YNL245C LCB4Q12246 624 aa6.24□□□□□ -1.41
CWC25YNL245C Q0010Q9ZZX9 128 aa6.24□□□□□ -1.41
CWC25YNL245C IQG1Q12280 1495 aa6.23□□□□□ -1.41
CWC25YNL245C PAC2P39937 518 aa6.23□□□□□ -1.41
CWC25YNL245C SAP1P39955 897 aaKnown RBP6.23□□□□□ -1.41
CWC25YNL245C BUD16P39988 312 aa6.23□□□□□ -1.41
CWC25YNL245C MRI1Q06489 411 aaKnown RBP6.23□□□□□ -1.41
CWC25YNL245C OPY2Q06810 360 aa6.23□□□□□ -1.41
CWC25YNL245C HEM1P09950 548 aaPredicted RBP6.22□□□□□ -1.41
CWC25YNL245C TY2A-LR1P0C2J4 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-FP0CX61 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-GR2P0CX62 438 aa6.22□□□□□ -1.41
CWC25YNL245C RRP43P25359 394 aaPredicted RBP6.22□□□□□ -1.41
CWC25YNL245C TY2A-CP25383 438 aa6.22□□□□□ -1.41
CWC25YNL245C CNS1P33313 385 aa6.22□□□□□ -1.41
CWC25YNL245C PPZ2P33329 710 aa6.22□□□□□ -1.41
CWC25YNL245C RPF2P36160 344 aaKnown RBP6.22□□□□□ -1.41
CWC25YNL245C YER010CP40011 234 aa6.22□□□□□ -1.41
CWC25YNL245C OPT1P40897 799 aa6.22□□□□□ -1.41
CWC25YNL245C MEP3P53390 489 aa6.22□□□□□ -1.41
CWC25YNL245C CSL4P53859 292 aaPredicted RBP6.22□□□□□ -1.41
CWC25YNL245C FMP30Q02883 468 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-DR2Q03483 438 aa6.22□□□□□ -1.41
CWC25YNL245C GTB1Q04924 702 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-BQ12260 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-OR2Q12293 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-DR1Q12392 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-OR1Q12439 438 aa6.22□□□□□ -1.41
CWC25YNL245C TY2A-DR3Q99303 438 aa6.22□□□□□ -1.41
CWC25YNL245C YMR084WA2P2R3 262 aa6.21□□□□□ -1.42
CWC25YNL245C ERC1P38767 581 aa6.21□□□□□ -1.42
CWC25YNL245C FUN12P39730 1002 aaKnown RBP6.21□□□□□ -1.42
CWC25YNL245C YIL161WP40449 235 aaKnown RBP6.21□□□□□ -1.42
CWC25YNL245C NPA3P47122 385 aa6.21□□□□□ -1.42
CWC25YNL245C AAT1Q01802 451 aa6.21□□□□□ -1.42
CWC25YNL245C PLM2Q04383 521 aa6.21□□□□□ -1.42
CWC25YNL245C HRD3Q05787 833 aa6.21□□□□□ -1.42
CWC25YNL245C PRS5Q12265 496 aaKnown RBP6.21□□□□□ -1.42
CWC25YNL245C YOR093CQ12275 1648 aa6.21□□□□□ -1.42
CWC25YNL245C PDR10P51533 1564 aa6.2□□□□□ -1.42
CWC25YNL245C COX1P00401 534 aa6.2□□□□□ -1.42
CWC25YNL245C EXO1P39875 702 aa6.2□□□□□ -1.42
CWC25YNL245C RIC1P40395 1056 aa6.2□□□□□ -1.42
CWC25YNL245C IST3P40565 148 aaPredicted RBP6.2□□□□□ -1.42
CWC25YNL245C TDA10P42938 290 aa6.2□□□□□ -1.42
CWC25YNL245C YJL043WP47053 257 aa6.2□□□□□ -1.42
CWC25YNL245C AI5_ALPHAQ9ZZX1 630 aa6.2□□□□□ -1.42
CWC25YNL245C BUD3P25558 1636 aa6.2□□□□□ -1.42
CWC25YNL245C YJU2P28320 278 aaPredicted RBP6.19□□□□□ -1.42
CWC25YNL245C RPC34P32910 317 aa6.19□□□□□ -1.42
CWC25YNL245C CBK1P53894 756 aa6.19□□□□□ -1.42
CWC25YNL245C VPS72Q03388 795 aa6.19□□□□□ -1.42
CWC25YNL245C SNO4Q04902 237 aa6.19□□□□□ -1.42
CWC25YNL245C TMA16Q08687 178 aa6.19□□□□□ -1.42
CWC25YNL245C HSP33Q08914 237 aaKnown RBP6.19□□□□□ -1.42
CWC25YNL245C HSP32Q08992 237 aa6.19□□□□□ -1.42
CWC25YNL245C SWT1Q12104 458 aa6.19□□□□□ -1.42
CWC25YNL245C PDR15Q04182 1529 aaKnown RBP6.19□□□□□ -1.42
CWC25YNL245C ARO1P08566 1588 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C YLR302CO13544 120 aa6.18□□□□□ -1.42
CWC25YNL245C AQY1P0CD91 305 aa6.18□□□□□ -1.42
CWC25YNL245C YML003WP0CF16 290 aa6.18□□□□□ -1.42
CWC25YNL245C SPO16P17122 198 aa6.18□□□□□ -1.42
CWC25YNL245C LRE1P25579 583 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C RFA2P26754 273 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C VBA2P38358 474 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C UBX6P47049 396 aa6.18□□□□□ -1.42
CWC25YNL245C ASE1P50275 885 aa6.18□□□□□ -1.42
CWC25YNL245C REG1Q00816 1014 aa6.18□□□□□ -1.42
CWC25YNL245C ATG23Q06671 453 aa6.18□□□□□ -1.42
CWC25YNL245C CYK3Q07533 885 aa6.18□□□□□ -1.42
CWC25YNL245C SLK19Q08581 821 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C YPL191CQ08930 360 aa6.18□□□□□ -1.42
CWC25YNL245C NUP157P40064 1391 aaKnown RBP6.18□□□□□ -1.42
CWC25YNL245C BNR1P40450 1375 aa6.18□□□□□ -1.42
CWC25YNL245C CHS3P29465 1165 aa6.17□□□□□ -1.42
CWC25YNL245C GEX2P36173 615 aa6.17□□□□□ -1.42
CWC25YNL245C RIX1P38883 763 aaPredicted RBP6.17□□□□□ -1.42
CWC25YNL245C MNT3P40549 630 aa6.17□□□□□ -1.42
CWC25YNL245C ARO10Q06408 635 aa6.17□□□□□ -1.42
CWC25YNL245C SES1P07284 462 aaKnown RBP6.16□□□□□ -1.42
CWC25YNL245C GFD2P25370 566 aaKnown RBP6.16□□□□□ -1.42
CWC25YNL245C LAC1P28496 418 aa6.16□□□□□ -1.42
CWC25YNL245C HES1P35843 434 aa6.16□□□□□ -1.42
CWC25YNL245C NAB3P38996 802 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms