RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W TY2A-OR2Q12293 438 aa3.58□□□□□ -1.84
YLR400WYLR400W SCM3Q12334 223 aa3.58□□□□□ -1.84
YLR400WYLR400W TY2A-DR1Q12392 438 aa3.58□□□□□ -1.84
YLR400WYLR400W TY2A-OR1Q12439 438 aa3.58□□□□□ -1.84
YLR400WYLR400W TY2A-DR3Q99303 438 aa3.58□□□□□ -1.84
YLR400WYLR400W SEC12P11655 471 aa3.57□□□□□ -1.84
YLR400WYLR400W PFK2P16862 959 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
YLR400WYLR400W SGF29P25554 259 aa3.57□□□□□ -1.84
YLR400WYLR400W RAD16P31244 790 aa3.57□□□□□ -1.84
YLR400WYLR400W MRPL9P31334 269 aa3.57□□□□□ -1.84
YLR400WYLR400W NPL6P32832 435 aa3.57□□□□□ -1.84
YLR400WYLR400W CNS1P33313 385 aa3.57□□□□□ -1.84
YLR400WYLR400W NUP120P35729 1037 aa3.57□□□□□ -1.84
YLR400WYLR400W YPT10P38146 199 aa3.57□□□□□ -1.84
YLR400WYLR400W YEL025CP39991 1188 aa3.57□□□□□ -1.84
YLR400WYLR400W TPA1P40032 644 aaKnown RBP3.57□□□□□ -1.84
YLR400WYLR400W YJR061WP40355 935 aa3.57□□□□□ -1.84
YLR400WYLR400W LYS14P40971 790 aa3.57□□□□□ -1.84
YLR400WYLR400W VTC2P43585 828 aa3.57□□□□□ -1.84
YLR400WYLR400W STB2P46679 850 aa3.57□□□□□ -1.84
YLR400WYLR400W BSC5P53755 489 aa3.57□□□□□ -1.84
YLR400WYLR400W USA1Q03714 838 aa3.57□□□□□ -1.84
YLR400WYLR400W VIP1Q06685 1146 aaKnown RBP3.57□□□□□ -1.84
YLR400WYLR400W YPL216WQ08964 1102 aa3.57□□□□□ -1.84
YLR400WYLR400W SNU66Q12420 587 aaPredicted RBP3.57□□□□□ -1.84
YLR400WYLR400W PGA3Q12746 312 aaKnown RBP3.57□□□□□ -1.84
YLR400WYLR400W YMR084WA2P2R3 262 aa3.56□□□□□ -1.84
YLR400WYLR400W CTT1P06115 562 aa3.56□□□□□ -1.84
YLR400WYLR400W URK1P27515 501 aa3.56□□□□□ -1.84
YLR400WYLR400W SAC6P32599 642 aaKnown RBP3.56□□□□□ -1.84
YLR400WYLR400W ARC1P46672 376 aaKnown RBP3.56□□□□□ -1.84
YLR400WYLR400W VPS4P52917 437 aa3.56□□□□□ -1.84
YLR400WYLR400W DUO1P53168 247 aaKnown RBP3.56□□□□□ -1.84
YLR400WYLR400W MRPL19P53875 158 aa3.56□□□□□ -1.84
YLR400WYLR400W RPS15Q01855 142 aaKnown RBP3.56□□□□□ -1.84
YLR400WYLR400W YSA1Q01976 231 aa3.56□□□□□ -1.84
YLR400WYLR400W YPL108WQ02872 168 aaPredicted RBP3.56□□□□□ -1.84
YLR400WYLR400W SPC19Q03954 165 aa3.56□□□□□ -1.84
YLR400WYLR400W UTP21Q06078 939 aaPredicted RBP3.56□□□□□ -1.84
YLR400WYLR400W PRS5Q12265 496 aaKnown RBP3.56□□□□□ -1.84
YLR400WYLR400W VCX1Q99385 411 aa3.56□□□□□ -1.84
YLR400WYLR400W ERG8P24521 451 aa3.55□□□□□ -1.84
YLR400WYLR400W CAP1P28495 268 aaKnown RBP3.55□□□□□ -1.84
YLR400WYLR400W NOP4P37838 685 aaKnown RBP3.55□□□□□ -1.84
YLR400WYLR400W APD1P38281 316 aa3.55□□□□□ -1.84
YLR400WYLR400W IST3P40565 148 aaPredicted RBP3.55□□□□□ -1.84
YLR400WYLR400W MEP2P41948 499 aa3.55□□□□□ -1.84
YLR400WYLR400W YFL015CP43578 164 aa3.55□□□□□ -1.84
YLR400WYLR400W IDS2P46958 469 aa3.55□□□□□ -1.84
YLR400WYLR400W ZAP1P47043 880 aa3.55□□□□□ -1.84
YLR400WYLR400W YJL043WP47053 257 aa3.55□□□□□ -1.84
YLR400WYLR400W RSC9Q03124 581 aa3.55□□□□□ -1.84
YLR400WYLR400W MFB1Q04922 465 aa3.55□□□□□ -1.84
YLR400WYLR400W STP3Q05937 343 aa3.55□□□□□ -1.84
YLR400WYLR400W SPN1Q06505 410 aaPredicted RBP3.55□□□□□ -1.84
YLR400WYLR400W PSK2Q08217 1101 aa3.55□□□□□ -1.84
YLR400WYLR400W TAH18Q12181 623 aa3.55□□□□□ -1.84
YLR400WYLR400W SEC3P33332 1336 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W ATP2P00830 511 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W SUI3P09064 285 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W YML003WP0CF16 290 aa3.54□□□□□ -1.84
YLR400WYLR400W SPO16P17122 198 aa3.54□□□□□ -1.84
YLR400WYLR400W IRC8P47046 822 aa3.54□□□□□ -1.84
YLR400WYLR400W PIL1P53252 339 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W YGR250CP53316 781 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W INN1P53901 409 aa3.54□□□□□ -1.84
YLR400WYLR400W ERG13P54839 491 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W REG1Q00816 1014 aa3.54□□□□□ -1.84
YLR400WYLR400W YLR287CQ05881 355 aa3.54□□□□□ -1.84
YLR400WYLR400W ENT4Q07872 247 aa3.54□□□□□ -1.84
YLR400WYLR400W NMD4Q12129 218 aa3.54□□□□□ -1.84
YLR400WYLR400W SKM1Q12469 655 aa3.54□□□□□ -1.84
YLR400WYLR400W HSH49Q99181 213 aaPredicted RBP3.54□□□□□ -1.84
YLR400WYLR400W PNO1Q99216 274 aaKnown RBP3.54□□□□□ -1.84
YLR400WYLR400W CET1O13297 549 aaPredicted RBP3.53□□□□□ -1.84
YLR400WYLR400W YLR302CO13544 120 aa3.53□□□□□ -1.84
YLR400WYLR400W CDC24P11433 854 aaPredicted RBP3.53□□□□□ -1.84
YLR400WYLR400W KAR3P17119 729 aa3.53□□□□□ -1.84
YLR400WYLR400W RNR3P21672 869 aaKnown RBP3.53□□□□□ -1.84
YLR400WYLR400W CDC5P32562 705 aa3.53□□□□□ -1.84
YLR400WYLR400W SDH8P38345 138 aa3.53□□□□□ -1.84
YLR400WYLR400W LSM5P40089 93 aaKnown RBP3.53□□□□□ -1.84
YLR400WYLR400W SNO3P43544 222 aa3.53□□□□□ -1.84
YLR400WYLR400W MRX6P48564 524 aa3.53□□□□□ -1.84
YLR400WYLR400W VPS75P53853 264 aa3.53□□□□□ -1.84
YLR400WYLR400W YNL092WP53934 400 aa3.53□□□□□ -1.84
YLR400WYLR400W MUB1Q03162 620 aa3.53□□□□□ -1.84
YLR400WYLR400W CRF1Q04930 467 aa3.53□□□□□ -1.84
YLR400WYLR400W TMA16Q08687 178 aa3.53□□□□□ -1.84
YLR400WYLR400W TGS1Q12052 315 aa3.53□□□□□ -1.84
YLR400WYLR400W NBP2Q12163 236 aa3.53□□□□□ -1.84
YLR400WYLR400W YBR255C-AQ3E776 120 aa3.53□□□□□ -1.84
YLR400WYLR400W ARG3P05150 338 aa3.52□□□□□ -1.85
YLR400WYLR400W HOM3P10869 527 aa3.52□□□□□ -1.85
YLR400WYLR400W CKA1P15790 372 aa3.52□□□□□ -1.85
YLR400WYLR400W YCK1P23291 538 aa3.52□□□□□ -1.85
YLR400WYLR400W PGS1P25578 521 aa3.52□□□□□ -1.85
YLR400WYLR400W ERG3P32353 365 aa3.52□□□□□ -1.85
YLR400WYLR400W CCL1P37366 393 aa3.52□□□□□ -1.85
YLR400WYLR400W ARO9P38840 513 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms