RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C TCP1P12612 559 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C URA10P30402 227 aa12.38□□□□□ -0.43
BDF1YLR399C CRM1P30822 1084 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C YKL222CP35995 705 aa12.38□□□□□ -0.43
BDF1YLR399C UTP30P36144 274 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C APN2P38207 520 aa12.38□□□□□ -0.43
BDF1YLR399C EGD2P38879 174 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C EFM3P47163 339 aa12.38□□□□□ -0.43
BDF1YLR399C YNL033WP53964 284 aa12.38□□□□□ -0.43
BDF1YLR399C YNL019CP53975 284 aa12.38□□□□□ -0.43
BDF1YLR399C HSP31Q04432 237 aa12.38□□□□□ -0.43
BDF1YLR399C PCL8Q08966 492 aa12.38□□□□□ -0.43
BDF1YLR399C SPE3Q12074 293 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C YMR030W-AQ3E760 96 aa12.38□□□□□ -0.43
BDF1YLR399C BCY1P07278 416 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C KIN2P13186 1147 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C VMA1P17255 1071 aaKnown RBP12.38□□□□□ -0.43
BDF1YLR399C AEP1P32493 518 aa12.38□□□□□ -0.43
BDF1YLR399C ATG12P38316 186 aa12.38□□□□□ -0.43
BDF1YLR399C MET12P46151 657 aa12.38□□□□□ -0.43
BDF1YLR399C TRS130Q03660 1102 aa12.38□□□□□ -0.43
BDF1YLR399C SSQ1Q05931 657 aaPredicted RBP12.38□□□□□ -0.43
BDF1YLR399C HSP42Q12329 375 aa12.38□□□□□ -0.43
BDF1YLR399C VPS5Q92331 675 aa12.38□□□□□ -0.43
BDF1YLR399C PHR1P05066 565 aaKnown RBP RIP-Chip data12.37□□□□□ -0.43not detected
BDF1YLR399C ERG12P07277 443 aa12.37□□□□□ -0.43
BDF1YLR399C PBS2P08018 668 aa12.37□□□□□ -0.43
BDF1YLR399C NFT1P0CE68 1218 aa12.37□□□□□ -0.43
BDF1YLR399C HSC82P15108 705 aaKnown RBP12.37□□□□□ -0.43
BDF1YLR399C RVS161P25343 265 aaKnown RBP12.37□□□□□ -0.43
BDF1YLR399C PEX3P28795 441 aa12.37□□□□□ -0.43
BDF1YLR399C MEI5P32489 222 aa12.37□□□□□ -0.43
BDF1YLR399C SMY2P32909 740 aaKnown RBP12.37□□□□□ -0.43
BDF1YLR399C ATG19P35193 415 aa12.37□□□□□ -0.43
BDF1YLR399C YJL070CP40361 888 aa12.37□□□□□ -0.43
BDF1YLR399C SNZ3P43545 298 aa12.37□□□□□ -0.43
BDF1YLR399C ARC35P53731 342 aaKnown RBP12.37□□□□□ -0.43
BDF1YLR399C SNZ2P53824 298 aa12.37□□□□□ -0.43
BDF1YLR399C BNI4P53858 892 aa12.37□□□□□ -0.43
BDF1YLR399C SPH1Q06160 661 aa12.37□□□□□ -0.43
BDF1YLR399C ATP6P00854 259 aa12.36□□□□□ -0.43
BDF1YLR399C YER152CP10356 443 aa12.36□□□□□ -0.43
BDF1YLR399C STF2P16965 84 aa12.36□□□□□ -0.43
BDF1YLR399C UBC8P28263 218 aa12.36□□□□□ -0.43
BDF1YLR399C ATP7P30902 174 aa12.36□□□□□ -0.43
BDF1YLR399C SRB2P34162 210 aa12.36□□□□□ -0.43
BDF1YLR399C TOS1P38288 455 aa12.36□□□□□ -0.43
BDF1YLR399C YGL039WP53183 348 aaKnown RBP12.36□□□□□ -0.43
BDF1YLR399C JIP5Q06214 492 aaPredicted RBP12.36□□□□□ -0.43
BDF1YLR399C BAG7Q12128 409 aa12.36□□□□□ -0.43
BDF1YLR399C TPK3P05986 398 aa12.36□□□□□ -0.43
BDF1YLR399C CDC31P06704 161 aaKnown RBP12.36□□□□□ -0.43
BDF1YLR399C RDH54P38086 958 aa12.36□□□□□ -0.43
BDF1YLR399C ARN1P38731 627 aa12.36□□□□□ -0.43
BDF1YLR399C YIL054WP40524 105 aa12.36□□□□□ -0.43
BDF1YLR399C GUS1P46655 708 aaKnown RBP RIP-Chip data12.36□□□□□ -0.43not detected
BDF1YLR399C CWC23P52868 283 aaPredicted RBP12.36□□□□□ -0.43
BDF1YLR399C VPS9P54787 451 aa12.36□□□□□ -0.43
BDF1YLR399C ELP3Q02908 557 aaKnown RBP12.36□□□□□ -0.43
BDF1YLR399C MRX10Q05648 414 aa12.36□□□□□ -0.43
BDF1YLR399C RTT10Q08924 1013 aa12.36□□□□□ -0.43
BDF1YLR399C SEN2P16658 377 aa12.35□□□□□ -0.43
BDF1YLR399C GDH2P33327 1092 aaKnown RBP12.35□□□□□ -0.43
BDF1YLR399C GUA1P38625 525 aaKnown RBP12.35□□□□□ -0.43
BDF1YLR399C VHR2P40041 505 aa12.35□□□□□ -0.43
BDF1YLR399C ASN2P49090 572 aaKnown RBP12.35□□□□□ -0.43
BDF1YLR399C TWF1P53250 332 aa12.35□□□□□ -0.43
BDF1YLR399C CDC55Q00362 526 aa12.35□□□□□ -0.43
BDF1YLR399C GAL83Q04739 417 aa12.35□□□□□ -0.43
BDF1YLR399C PHM6Q05637 104 aa12.35□□□□□ -0.43
BDF1YLR399C GAS5Q08193 484 aa12.35□□□□□ -0.43
BDF1YLR399C NGL1Q08213 363 aaKnown RBP12.35□□□□□ -0.43
BDF1YLR399C TY3A-GQ12173 290 aa12.35□□□□□ -0.43
BDF1YLR399C TY3A-IQ99219 290 aa12.35□□□□□ -0.43
BDF1YLR399C PDE2P06776 526 aa12.34□□□□□ -0.43
BDF1YLR399C SEC15P22224 910 aa12.34□□□□□ -0.43
BDF1YLR399C GID7P25569 745 aa12.34□□□□□ -0.43
BDF1YLR399C GRS1P38088 690 aaKnown RBP12.34□□□□□ -0.43
BDF1YLR399C CYC2P38909 366 aa12.34□□□□□ -0.43
BDF1YLR399C SWD1P39706 426 aa12.34□□□□□ -0.43
BDF1YLR399C RPH1P39956 796 aa12.34□□□□□ -0.43
BDF1YLR399C NPP2P39997 493 aa12.34□□□□□ -0.43
BDF1YLR399C JLP2P40206 208 aa12.34□□□□□ -0.43
BDF1YLR399C MRPL13Q02204 264 aa12.34□□□□□ -0.43
BDF1YLR399C YPR196WQ06595 470 aa12.34□□□□□ -0.43
BDF1YLR399C CRD1Q07560 283 aa12.34□□□□□ -0.43
BDF1YLR399C MET16P18408 261 aaPredicted RBP12.34□□□□□ -0.43
BDF1YLR399C SKG1P36169 355 aa12.34□□□□□ -0.43
BDF1YLR399C CST26P38226 397 aa12.34□□□□□ -0.43
BDF1YLR399C HXT6P39003 570 aaKnown RBP12.34□□□□□ -0.43
BDF1YLR399C HXT7P39004 570 aa12.34□□□□□ -0.43
BDF1YLR399C YNL010WP53981 241 aaKnown RBP12.34□□□□□ -0.43
BDF1YLR399C GPD1Q00055 391 aaKnown RBP12.34□□□□□ -0.43
BDF1YLR399C YMR155WQ03795 547 aa12.34□□□□□ -0.43
BDF1YLR399C RGC1Q06108 1083 aaKnown RBP12.34□□□□□ -0.43
BDF1YLR399C YBR298C-AQ8TGK4 73 aa12.34□□□□□ -0.43
BDF1YLR399C TPK2P06245 380 aa12.33□□□□□ -0.44
BDF1YLR399C TSR4P25040 408 aa12.33□□□□□ -0.44
BDF1YLR399C HRR25P29295 494 aaKnown RBP12.33□□□□□ -0.44
BDF1YLR399C PEP7P32609 515 aa12.33□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms