RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C YDR514CQ04408 483 aa4.53□□□□□ -1.68
CDC42YLR229C VIK1Q12045 647 aa4.53□□□□□ -1.68
CDC42YLR229C TY3A-GQ12173 290 aa4.53□□□□□ -1.68
CDC42YLR229C TRM11Q12463 433 aa4.53□□□□□ -1.68
CDC42YLR229C TY3A-IQ99219 290 aa4.53□□□□□ -1.68
CDC42YLR229C RPS3P05750 240 aaKnown RBP4.52□□□□□ -1.69
CDC42YLR229C MPH2P0CD99 609 aa4.52□□□□□ -1.69
CDC42YLR229C PYC1P11154 1178 aaKnown RBP4.52□□□□□ -1.69
CDC42YLR229C CMP2P14747 604 aa4.52□□□□□ -1.69
CDC42YLR229C CDC42P19073 191 aa4.52□□□□□ -1.69
CDC42YLR229C MSH2P25847 964 aa4.52□□□□□ -1.69
CDC42YLR229C YUR1P26725 428 aa4.52□□□□□ -1.69
CDC42YLR229C DBF4P32325 704 aa4.52□□□□□ -1.69
CDC42YLR229C YKL151CP36059 337 aa4.52□□□□□ -1.69
CDC42YLR229C YBR062CP38239 180 aa4.52□□□□□ -1.69
CDC42YLR229C HSM3P38348 480 aa4.52□□□□□ -1.69
CDC42YLR229C TSL1P38427 1098 aaKnown RBP4.52□□□□□ -1.69
CDC42YLR229C GIC1P38785 314 aa4.52□□□□□ -1.69
CDC42YLR229C ALG5P40350 334 aa4.52□□□□□ -1.69
CDC42YLR229C JEM1P40358 645 aa4.52□□□□□ -1.69
CDC42YLR229C AXL1P40851 1208 aa4.52□□□□□ -1.69
CDC42YLR229C DRN1P53255 507 aaKnown RBP4.52□□□□□ -1.69
CDC42YLR229C COS6P53344 381 aa4.52□□□□□ -1.69
CDC42YLR229C SNO2P53823 222 aa4.52□□□□□ -1.69
CDC42YLR229C ORC3P54790 616 aa4.52□□□□□ -1.69
CDC42YLR229C MTG1Q03151 367 aaPredicted RBP4.52□□□□□ -1.69
CDC42YLR229C ATG16Q03818 150 aa4.52□□□□□ -1.69
CDC42YLR229C HMO1Q03973 246 aaKnown RBP4.52□□□□□ -1.69
CDC42YLR229C ARO80Q04052 950 aa4.52□□□□□ -1.69
CDC42YLR229C PPM1Q04081 328 aa4.52□□□□□ -1.69
CDC42YLR229C TDA9Q04545 1251 aa4.52□□□□□ -1.69
CDC42YLR229C YDR222WQ04925 415 aa4.52□□□□□ -1.69
CDC42YLR229C TAF9Q05027 157 aa4.52□□□□□ -1.69
CDC42YLR229C ECM7Q06200 448 aa4.52□□□□□ -1.69
CDC42YLR229C YSH1Q06224 779 aaPredicted RBP4.52□□□□□ -1.69
CDC42YLR229C HFI1Q12060 488 aa4.52□□□□□ -1.69
CDC42YLR229C TAF3Q12297 353 aa4.52□□□□□ -1.69
CDC42YLR229C GIS3Q12418 502 aa4.52□□□□□ -1.69
CDC42YLR229C AI5_BETAQ9ZZX0 354 aa4.52□□□□□ -1.69
CDC42YLR229C CYC1P00044 109 aaPredicted RBP4.51□□□□□ -1.69
CDC42YLR229C PEP5P12868 1029 aa4.51□□□□□ -1.69
CDC42YLR229C SNA3P14359 133 aa4.51□□□□□ -1.69
CDC42YLR229C COX11P19516 300 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C RNR1P21524 888 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C KIN82P25341 720 aa4.51□□□□□ -1.69
CDC42YLR229C RGT1P32862 1170 aa4.51□□□□□ -1.69
CDC42YLR229C PEX6P33760 1030 aa4.51□□□□□ -1.69
CDC42YLR229C ECM4P36156 370 aa4.51□□□□□ -1.69
CDC42YLR229C POL12P38121 705 aaPredicted RBP4.51□□□□□ -1.69
CDC42YLR229C MMS4P38257 691 aa4.51□□□□□ -1.69
CDC42YLR229C FES1P38260 290 aa4.51□□□□□ -1.69
CDC42YLR229C VID24P38263 362 aa4.51□□□□□ -1.69
CDC42YLR229C MMS21P38632 267 aa4.51□□□□□ -1.69
CDC42YLR229C ETP1P38748 585 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C YAP1801P38856 637 aa4.51□□□□□ -1.69
CDC42YLR229C ZRG8P40021 1076 aa4.51□□□□□ -1.69
CDC42YLR229C PHO86P46956 311 aa4.51□□□□□ -1.69
CDC42YLR229C NOP9P47077 666 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C MCM6P53091 1017 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C PCL10P53124 433 aa4.51□□□□□ -1.69
CDC42YLR229C PUS2P53167 370 aa4.51□□□□□ -1.69
CDC42YLR229C RIM8P53179 542 aa4.51□□□□□ -1.69
CDC42YLR229C YGR012WP53206 393 aa4.51□□□□□ -1.69
CDC42YLR229C PBP1P53297 722 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C TRS130Q03660 1102 aa4.51□□□□□ -1.69
CDC42YLR229C NDL1Q06568 189 aa4.51□□□□□ -1.69
CDC42YLR229C REH1Q06709 432 aa4.51□□□□□ -1.69
CDC42YLR229C SHS1Q07657 551 aa4.51□□□□□ -1.69
CDC42YLR229C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
CDC42YLR229C LPX1Q12405 387 aaKnown RBP4.51□□□□□ -1.69
CDC42YLR229C RTP1Q12751 981 aa4.51□□□□□ -1.69
CDC42YLR229C ADE3P07245 946 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C HSF1P10961 833 aa4.5□□□□□ -1.69
CDC42YLR229C POX1P13711 748 aa4.5□□□□□ -1.69
CDC42YLR229C PMS1P14242 873 aa4.5□□□□□ -1.69
CDC42YLR229C SEC63P14906 663 aa4.5□□□□□ -1.69
CDC42YLR229C NPP1P25353 742 aa4.5□□□□□ -1.69
CDC42YLR229C RRT12P25381 491 aa4.5□□□□□ -1.69
CDC42YLR229C CAP1P28495 268 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C TMT1P32643 299 aa4.5□□□□□ -1.69
CDC42YLR229C NPL6P32832 435 aa4.5□□□□□ -1.69
CDC42YLR229C SKG6P32900 734 aaPredicted RBP4.5□□□□□ -1.69
CDC42YLR229C SRP101P32916 621 aa4.5□□□□□ -1.69
CDC42YLR229C APE3P37302 537 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C CCL1P37366 393 aa4.5□□□□□ -1.69
CDC42YLR229C PMC1P38929 1173 aaPredicted RBP4.5□□□□□ -1.69
CDC42YLR229C END3P39013 349 aa4.5□□□□□ -1.69
CDC42YLR229C ARB1P40024 610 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C SCS2P40075 244 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C PDS1P40316 373 aaPredicted RBP4.5□□□□□ -1.69
CDC42YLR229C ASG1P40467 964 aa4.5□□□□□ -1.69
CDC42YLR229C NMD5P46970 1048 aa4.5□□□□□ -1.69
CDC42YLR229C SCS3P53012 380 aa4.5□□□□□ -1.69
CDC42YLR229C MNP1P53163 194 aaPredicted RBP4.5□□□□□ -1.69
CDC42YLR229C SFB2P53953 876 aa4.5□□□□□ -1.69
CDC42YLR229C MSC2Q03455 724 aa4.5□□□□□ -1.69
CDC42YLR229C YDR278CQ05612 105 aa4.5□□□□□ -1.69
CDC42YLR229C NTG2Q08214 380 aa4.5□□□□□ -1.69
CDC42YLR229C CHS5Q12114 671 aaKnown RBP4.5□□□□□ -1.69
CDC42YLR229C SGT2Q12118 346 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms