RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeast

Gene SPC3, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC3	YLR066W	AHA1	Q12449	350 aa	Known RBP	4.91	□□□□□ -1.62
SPC3	YLR066W	INH1	P01097	85 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	RPL19A	P0CX82	189 aa	Known RBP	4.9	□□□□□ -1.63
SPC3	YLR066W	RPL19B	P0CX83	189 aa	Predicted RBP	4.9	□□□□□ -1.63
SPC3	YLR066W	RFA2	P26754	273 aa	Known RBP	4.9	□□□□□ -1.63
SPC3	YLR066W	LAC1	P28496	418 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	EMP70	P32802	667 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	FMP10	P40098	244 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	TDA10	P42938	290 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	CIR1	P42940	261 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	YFL015C	P43578	164 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	DCP2	P53550	970 aa	Known RBP	4.9	□□□□□ -1.63
SPC3	YLR066W	APM1	Q00776	475 aa	Predicted RBP	4.9	□□□□□ -1.63
SPC3	YLR066W	MUB1	Q03162	620 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	GIS1	Q03833	894 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	ARG7	Q04728	441 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	HRD3	Q05787	833 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	ULA1	Q12059	462 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
SPC3	YLR066W	Q0010	Q9ZZX9	128 aa		4.9	□□□□□ -1.63
SPC3	YLR066W	COX1	P00401	534 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	MRP7	P12687	371 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	MFT1	P33441	392 aa	Known RBP	4.89	□□□□□ -1.63
SPC3	YLR066W	SAP1	P39955	897 aa	Known RBP	4.89	□□□□□ -1.63
SPC3	YLR066W	SLZ1	P40167	298 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	ESL1	P40456	1118 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	LYS14	P40971	790 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	MSY1	P48527	492 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	YNL058C	P53947	316 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	YOR111W	Q99210	232 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	AI5_ALPHA	Q9ZZX1	630 aa		4.89	□□□□□ -1.63
SPC3	YLR066W	CDC31	P06704	161 aa	Known RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	HEM1	P09950	548 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	RRP43	P25359	394 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	YJU2	P28320	278 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	KES1	P35844	434 aa	Known RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	NDE1	P40215	560 aa		4.88	□□□□□ -1.63
SPC3	YLR066W	QRI1	P43123	477 aa	Known RBP	4.88	□□□□□ -1.63
SPC3	YLR066W	YSA1	Q01976	231 aa		4.88	□□□□□ -1.63
SPC3	YLR066W	FCP1	Q03254	732 aa		4.88	□□□□□ -1.63
SPC3	YLR066W	SES1	P07284	462 aa	Known RBP	4.87	□□□□□ -1.63
SPC3	YLR066W	SPO11	P23179	398 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	AAD3	P25612	363 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	RPC34	P32910	317 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	ALY1	P36117	915 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	PAC2	P39937	518 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	IME4	P41833	600 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	YAT1	P80235	687 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	YDR109C	Q04585	715 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	HUA2	Q12134	243 aa		4.87	□□□□□ -1.63
SPC3	YLR066W	NOP58	Q12499	511 aa	Known RBP	4.87	□□□□□ -1.63
SPC3	YLR066W	ADE5,7	P07244	802 aa	Known RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	CMK1	P27466	446 aa	Known RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	ESL2	P36168	1195 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	AAP1	P37898	856 aa	Known RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	KTR3	P38130	404 aa	Predicted RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	YBL029W	P38201	376 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	ASG1	P40467	964 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	DUO1	P53168	247 aa	Known RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	PIL1	P53252	339 aa	Known RBP	4.86	□□□□□ -1.63
SPC3	YLR066W	YNR061C	P53747	219 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	INN1	P53901	409 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	CRN1	Q06440	651 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	SWA2	Q06677	668 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	CYK3	Q07533	885 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	ENT4	Q07872	247 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	YBR126W-A	Q8TGU7	68 aa		4.86	□□□□□ -1.63
SPC3	YLR066W	YBR085C-A	O43137	85 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	SEC53	P07283	254 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	ILV2	P07342	687 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	OLE1	P21147	510 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	YSP3	P25036	478 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	SGF29	P25554	259 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	YMC1	P32331	307 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	NTR2	P36118	322 aa	Predicted RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	RPN11	P43588	306 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	ADE16	P54113	591 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	RAD30	Q04049	632 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	RIX7	Q07844	837 aa	Known RBP	4.85	□□□□□ -1.63
SPC3	YLR066W	YOR019W	Q99248	730 aa		4.85	□□□□□ -1.63
SPC3	YLR066W	PCT1	P13259	424 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	MET8	P15807	274 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	PTC6	P25646	442 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	GSY2	P27472	705 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	SEC31	P38968	1273 aa	Known RBP	4.84	□□□□□ -1.63
SPC3	YLR066W	FLC2	P39719	783 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	EXO1	P39875	702 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	MRX1	P40050	688 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	YJL043W	P47053	257 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	INA17	Q02888	182 aa		4.84	□□□□□ -1.63
SPC3	YLR066W	VIP1	Q06685	1146 aa	Known RBP	4.84	□□□□□ -1.63
SPC3	YLR066W	SLK19	Q08581	821 aa	Known RBP	4.84	□□□□□ -1.63
SPC3	YLR066W	LEA1	Q08963	238 aa	Predicted RBP	4.84	□□□□□ -1.63
SPC3	YLR066W	SEC3	P33332	1336 aa	Known RBP	4.83	□□□□□ -1.64
SPC3	YLR066W	GCN4	P03069	281 aa		4.83	□□□□□ -1.64
SPC3	YLR066W	BI2	P03873	423 aa		4.83	□□□□□ -1.64
SPC3	YLR066W	SRP54	P20424	541 aa	Known RBP	4.83	□□□□□ -1.64
SPC3	YLR066W	SOF1	P33750	489 aa	Known RBP	4.83	□□□□□ -1.64
SPC3	YLR066W	APD1	P38281	316 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms