RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTM1	YKL039W	PRS5	Q12265	496 aa	Known RBP	4.87	□□□□□ -1.63
PTM1	YKL039W	BI2	P03873	423 aa		4.86	□□□□□ -1.63
PTM1	YKL039W	MAK32	P23060	363 aa		4.86	□□□□□ -1.63
PTM1	YKL039W	MSH1	P25846	959 aa		4.86	□□□□□ -1.63
PTM1	YKL039W	YPL071C	Q02864	156 aa		4.86	□□□□□ -1.63
PTM1	YKL039W	ARA2	Q04212	335 aa		4.86	□□□□□ -1.63
PTM1	YKL039W	CET1	O13297	549 aa	Predicted RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	BIK1	P11709	440 aa		4.85	□□□□□ -1.63
PTM1	YKL039W	SEC18	P18759	758 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	YBR138C	P38277	524 aa		4.85	□□□□□ -1.63
PTM1	YKL039W	IMD2	P38697	523 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	VPS27	P40343	622 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	PSA1	P41940	361 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	IMD3	P50095	523 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	YPL108W	Q02872	168 aa	Predicted RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	TPO3	Q06451	622 aa		4.85	□□□□□ -1.63
PTM1	YKL039W	YPL191C	Q08930	360 aa		4.85	□□□□□ -1.63
PTM1	YKL039W	LYS21	Q12122	440 aa	Known RBP	4.85	□□□□□ -1.63
PTM1	YKL039W	SUL2	Q12325	893 aa		4.85	□□□□□ -1.63
PTM1	YKL039W	URE2	P23202	354 aa	Known RBP	4.84	□□□□□ -1.63
PTM1	YKL039W	PTP1	P25044	335 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	ARP2	P32381	391 aa	Known RBP	4.84	□□□□□ -1.63
PTM1	YKL039W	VBA2	P38358	474 aa	Known RBP	4.84	□□□□□ -1.63
PTM1	YKL039W	SNO3	P43544	222 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	NET1	P47035	1189 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	UBX4	P54730	416 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	AAT1	Q01802	451 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	AFT2	Q08957	416 aa		4.84	□□□□□ -1.63
PTM1	YKL039W	MIS1	P09440	975 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	SIP1	P32578	815 aa		4.83	□□□□□ -1.64
PTM1	YKL039W	ECM32	P32644	1121 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	RPF2	P36160	344 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	RPT2	P40327	437 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	NOP2	P40991	618 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	NPA3	P47122	385 aa		4.83	□□□□□ -1.64
PTM1	YKL039W	YGR079W	P53249	370 aa		4.83	□□□□□ -1.64
PTM1	YKL039W	ERG13	P54839	491 aa	Known RBP	4.83	□□□□□ -1.64
PTM1	YKL039W	YAT1	P80235	687 aa		4.83	□□□□□ -1.64
PTM1	YKL039W	ATG21	Q02887	496 aa		4.83	□□□□□ -1.64
PTM1	YKL039W	APA1	P16550	321 aa	Known RBP	4.82	□□□□□ -1.64
PTM1	YKL039W	PHO81	P17442	1178 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	URK1	P27515	501 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	PUG1	P40100	303 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	UBP7	P40453	1071 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	PAP2	P53632	584 aa	Known RBP	4.82	□□□□□ -1.64
PTM1	YKL039W	IDP3	P53982	420 aa	Known RBP	4.82	□□□□□ -1.64
PTM1	YKL039W	SRB8	P25648	1427 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	PET122	P10355	254 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	PGI1	P12709	554 aa	Known RBP	4.82	□□□□□ -1.64
PTM1	YKL039W	GSH1	P32477	678 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	ACA1	P39970	489 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	BUD16	P39988	312 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	CIN1	P40987	1014 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	STP1	Q00947	519 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	SNU56	Q03782	492 aa	Known RBP	4.82	□□□□□ -1.64
PTM1	YKL039W	GTB1	Q04924	702 aa		4.82	□□□□□ -1.64
PTM1	YKL039W	YMR085W	P0CF18	432 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	FSH1	P38777	243 aa	Known RBP	4.81	□□□□□ -1.64
PTM1	YKL039W	ERV46	P39727	415 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	YNL058C	P53947	316 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	CIA1	Q05583	330 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	YOR389W	Q08912	624 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	BCK1	Q01389	1478 aa		4.81	□□□□□ -1.64
PTM1	YKL039W	COX1	P00401	534 aa		4.8	□□□□□ -1.64
PTM1	YKL039W	NCP1	P16603	691 aa	Known RBP	4.8	□□□□□ -1.64
PTM1	YKL039W	HES1	P35843	434 aa		4.8	□□□□□ -1.64
PTM1	YKL039W	IRC7	P43623	340 aa		4.8	□□□□□ -1.64
PTM1	YKL039W	CRC1	Q12289	327 aa		4.8	□□□□□ -1.64
PTM1	YKL039W	YAP1	P19880	650 aa	Known RBP	4.79	□□□□□ -1.64
PTM1	YKL039W	CLB4	P24871	460 aa		4.79	□□□□□ -1.64
PTM1	YKL039W	LAC1	P28496	418 aa		4.79	□□□□□ -1.64
PTM1	YKL039W	SWC3	P31376	625 aa		4.79	□□□□□ -1.64
PTM1	YKL039W	TPM2	P40414	161 aa		4.79	□□□□□ -1.64
PTM1	YKL039W	ARC35	P53731	342 aa	Known RBP	4.79	□□□□□ -1.64
PTM1	YKL039W	TRS130	Q03660	1102 aa		4.79	□□□□□ -1.64
PTM1	YKL039W	RVB2	Q12464	471 aa	Known RBP	4.79	□□□□□ -1.64
PTM1	YKL039W	ILV2	P07342	687 aa	Known RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	MSM1	P22438	575 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	FUN12	P39730	1002 aa	Known RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	YRB30	P53107	440 aa	Predicted RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	LEA1	Q08963	238 aa	Predicted RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	ILS1	P09436	1072 aa	Known RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	YCL049C	P25577	312 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	PTC6	P25646	442 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	COQ3	P27680	312 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	TMT1	P32643	299 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	ERR3	P42222	437 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	ZAP1	P47043	880 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	MTG1	Q03151	367 aa	Predicted RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	STP3	Q05937	343 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	VAM6	Q07468	1049 aa		4.78	□□□□□ -1.64
PTM1	YKL039W	GET3	Q12154	354 aa	Known RBP	4.78	□□□□□ -1.64
PTM1	YKL039W	GLO1	P50107	326 aa		4.77	□□□□□ -1.65
PTM1	YKL039W	COP1	P53622	1201 aa	Known RBP	4.77	□□□□□ -1.65
PTM1	YKL039W	ICT1	Q12385	394 aa		4.77	□□□□□ -1.65
PTM1	YKL039W	SKP2	P42843	763 aa		4.76	□□□□□ -1.65
PTM1	YKL039W	PFA4	Q12006	378 aa		4.76	□□□□□ -1.65
PTM1	YKL039W	RGT2	Q12300	763 aa		4.76	□□□□□ -1.65
PTM1	YKL039W	GAL4	P04386	881 aa		4.75	□□□□□ -1.65
PTM1	YKL039W	YML003W	P0CF16	290 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms