RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C CHK1P38147 527 aa3.16□□□□□ -1.9
RPN1YHR027C YBR137WP38276 179 aa3.16□□□□□ -1.9
RPN1YHR027C SOH1P38633 127 aa3.16□□□□□ -1.9
RPN1YHR027C COS4P43542 379 aa3.16□□□□□ -1.9
RPN1YHR027C COS5P47187 383 aa3.16□□□□□ -1.9
RPN1YHR027C RAI1P53063 387 aaKnown RBP3.16□□□□□ -1.9
RPN1YHR027C COG1P53079 417 aa3.16□□□□□ -1.9
RPN1YHR027C NUT1P53114 1132 aa3.16□□□□□ -1.9
RPN1YHR027C SNF12P53628 566 aa3.16□□□□□ -1.9
RPN1YHR027C COS1P53822 381 aa3.16□□□□□ -1.9
RPN1YHR027C DAK1P54838 584 aaKnown RBP3.16□□□□□ -1.9
RPN1YHR027C RPL6AQ02326 176 aaKnown RBP3.16□□□□□ -1.9
RPN1YHR027C VHS1Q03785 461 aa3.16□□□□□ -1.9
RPN1YHR027C GAL83Q04739 417 aa3.16□□□□□ -1.9
RPN1YHR027C ASA1Q06822 443 aa3.16□□□□□ -1.9
RPN1YHR027C YPD1Q07688 167 aa3.16□□□□□ -1.9
RPN1YHR027C COS7Q07788 383 aa3.16□□□□□ -1.9
RPN1YHR027C YOL075CQ08234 1294 aa3.16□□□□□ -1.9
RPN1YHR027C FEX1Q08913 375 aa3.16□□□□□ -1.9
RPN1YHR027C FLC1Q08967 793 aa3.16□□□□□ -1.9
RPN1YHR027C THI21Q08975 551 aa3.16□□□□□ -1.9
RPN1YHR027C AKR2Q12013 749 aa3.16□□□□□ -1.9
RPN1YHR027C ATP14Q12349 124 aa3.16□□□□□ -1.9
RPN1YHR027C YOR012WQ12351 137 aa3.16□□□□□ -1.9
RPN1YHR027C FKS3Q04952 1785 aa3.16□□□□□ -1.9
RPN1YHR027C TUB2P02557 457 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C CBP2P03874 630 aaPredicted RBP3.15□□□□□ -1.9
RPN1YHR027C RPL25P04456 142 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C GPH1P06738 902 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C ADE5,7P07244 802 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C MCM5P29496 775 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C SPT14P32363 452 aa3.15□□□□□ -1.9
RPN1YHR027C CUE2P36075 443 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C PRS2P38620 318 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C LEU5P38702 357 aa3.15□□□□□ -1.9
RPN1YHR027C VPS29P38759 282 aa3.15□□□□□ -1.9
RPN1YHR027C SMF2P38778 549 aa3.15□□□□□ -1.9
RPN1YHR027C HRB1P38922 454 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
RPN1YHR027C YDR089WP38966 869 aa3.15□□□□□ -1.9
RPN1YHR027C STM1P39015 273 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C EXO1P39875 702 aa3.15□□□□□ -1.9
RPN1YHR027C STL1P39932 569 aa3.15□□□□□ -1.9
RPN1YHR027C PTC2P39966 464 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C DSE1P40077 573 aa3.15□□□□□ -1.9
RPN1YHR027C ABM1P47146 123 aa3.15□□□□□ -1.9
RPN1YHR027C CWC23P52868 283 aaPredicted RBP3.15□□□□□ -1.9
RPN1YHR027C SLI1P53304 468 aa3.15□□□□□ -1.9
RPN1YHR027C DSE4P53753 1117 aa3.15□□□□□ -1.9
RPN1YHR027C YPL068CQ02749 293 aa3.15□□□□□ -1.9
RPN1YHR027C SHR3Q02774 210 aa3.15□□□□□ -1.9
RPN1YHR027C ELP3Q02908 557 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C SNX41Q04053 625 aa3.15□□□□□ -1.9
RPN1YHR027C YMR027WQ04371 470 aa3.15□□□□□ -1.9
RPN1YHR027C SPC2Q04969 178 aa3.15□□□□□ -1.9
RPN1YHR027C NGL1Q08213 363 aaKnown RBP3.15□□□□□ -1.9
RPN1YHR027C DIA2Q08496 732 aaPredicted RBP3.15□□□□□ -1.9
RPN1YHR027C REX3Q12090 404 aa3.15□□□□□ -1.9
RPN1YHR027C OSW2Q12202 724 aa3.15□□□□□ -1.9
RPN1YHR027C YDR061WQ12298 539 aa3.15□□□□□ -1.9
RPN1YHR027C NCB2Q92317 146 aa3.15□□□□□ -1.9
RPN1YHR027C YIL177CP40434 1758 aa3.15□□□□□ -1.9
RPN1YHR027C YJL225CP40889 1758 aa3.15□□□□□ -1.9
RPN1YHR027C AI2P03876 854 aa3.15□□□□□ -1.91
RPN1YHR027C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91 RIP-Chip
RPN1YHR027C CDC6P09119 513 aa3.15□□□□□ -1.91
RPN1YHR027C HOM3P10869 527 aa3.15□□□□□ -1.91
RPN1YHR027C LAT1P12695 482 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C NSP1P14907 823 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C APA1P16550 321 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C HEM15P16622 393 aa3.15□□□□□ -1.91
RPN1YHR027C SAN1P22470 610 aa3.15□□□□□ -1.91
RPN1YHR027C SGV1P23293 657 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C DBP2P24783 546 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C ATG22P25568 528 aa3.15□□□□□ -1.91
RPN1YHR027C PTC6P25646 442 aa3.15□□□□□ -1.91
RPN1YHR027C SBA1P28707 216 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C CAM1P29547 415 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C SAC1P32368 623 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C HIR1P32479 840 aa3.15□□□□□ -1.91
RPN1YHR027C ANP1P32629 500 aa3.15□□□□□ -1.91
RPN1YHR027C SEC61P32915 480 aa3.15□□□□□ -1.91
RPN1YHR027C CBT1P36038 271 aaPredicted RBP3.15□□□□□ -1.91
RPN1YHR027C ECM2P38241 364 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C POP7P38291 140 aa3.15□□□□□ -1.91
RPN1YHR027C YBR238CP38330 731 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C THO1P40040 218 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C PIG2P40187 538 aa3.15□□□□□ -1.91
RPN1YHR027C PSF2P40359 213 aa3.15□□□□□ -1.91
RPN1YHR027C UBP7P40453 1071 aa3.15□□□□□ -1.91
RPN1YHR027C YFL034WP43564 1073 aa3.15□□□□□ -1.91
RPN1YHR027C SAD1P43589 448 aa3.15□□□□□ -1.91
RPN1YHR027C GUS1P46655 708 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
RPN1YHR027C ASE1P50275 885 aa3.15□□□□□ -1.91
RPN1YHR027C ROM1P53046 1155 aa3.15□□□□□ -1.91
RPN1YHR027C RET3P53600 189 aa3.15□□□□□ -1.91
RPN1YHR027C UBX4P54730 416 aa3.15□□□□□ -1.91
RPN1YHR027C PFA5Q03289 374 aa3.15□□□□□ -1.91
RPN1YHR027C RQC1Q05468 723 aaKnown RBP3.15□□□□□ -1.91
RPN1YHR027C BUR2Q05949 395 aa3.15□□□□□ -1.91
RPN1YHR027C BCP1Q06338 283 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms