RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	SCO2	P38072	301 aa		4.17	□□□□□ -1.74
VMA7	YGR020C	TOM71	P38825	639 aa	Known RBP	4.17	□□□□□ -1.74
VMA7	YGR020C	PSF2	P40359	213 aa		4.17	□□□□□ -1.74
VMA7	YGR020C	CDC1	P40986	491 aa		4.17	□□□□□ -1.74
VMA7	YGR020C	ADE16	P54113	591 aa	Known RBP	4.17	□□□□□ -1.74
VMA7	YGR020C	RPL15B	P54780	204 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA7	YGR020C	ECM22	Q05958	814 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA7	YGR020C	VAM6	Q07468	1049 aa		4.17	□□□□□ -1.74
VMA7	YGR020C	CIR2	Q08822	631 aa		4.17	□□□□□ -1.74
VMA7	YGR020C	SUI3	P09064	285 aa	Known RBP	4.16	□□□□□ -1.74
VMA7	YGR020C	APA1	P16550	321 aa	Known RBP	4.16	□□□□□ -1.74
VMA7	YGR020C	AIM17	P23180	465 aa	Known RBP	4.16	□□□□□ -1.74
VMA7	YGR020C	OCT1	P35999	772 aa		4.16	□□□□□ -1.74
VMA7	YGR020C	PHM8	P40025	321 aa		4.16	□□□□□ -1.74
VMA7	YGR020C	YIL161W	P40449	235 aa	Known RBP	4.16	□□□□□ -1.74
VMA7	YGR020C	IRC8	P47046	822 aa		4.16	□□□□□ -1.74
VMA7	YGR020C	YJR008W	P47085	338 aa		4.16	□□□□□ -1.74
VMA7	YGR020C	SWT1	Q12104	458 aa		4.16	□□□□□ -1.74
VMA7	YGR020C	NUC1	P08466	329 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	YCP4	P25349	247 aa	Known RBP	4.15	□□□□□ -1.75
VMA7	YGR020C	YCL049C	P25577	312 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	NPR3	P38742	1146 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	TPA1	P40032	644 aa	Known RBP	4.15	□□□□□ -1.75
VMA7	YGR020C	ASG1	P40467	964 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	YIR016W	P40572	265 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	YNL144C	P53907	740 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	CIA1	Q05583	330 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	ATX2	Q12067	313 aa		4.15	□□□□□ -1.75
VMA7	YGR020C	ATP2	P00830	511 aa	Known RBP	4.14	□□□□□ -1.75
VMA7	YGR020C	PCT1	P13259	424 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	SPO16	P17122	198 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	YSP3	P25036	478 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	EXO84	P38261	753 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	MDV1	P47025	714 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	YPT11	P48559	417 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	DCP2	P53550	970 aa	Known RBP	4.14	□□□□□ -1.75
VMA7	YGR020C	ARC35	P53731	342 aa	Known RBP	4.14	□□□□□ -1.75
VMA7	YGR020C	MRPL13	Q02204	264 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	BLS1	Q06071	122 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	MCH4	Q08268	501 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	COX17	Q12287	69 aa		4.14	□□□□□ -1.75
VMA7	YGR020C	YPT1	P01123	206 aa	Known RBP	4.13	□□□□□ -1.75
VMA7	YGR020C	MRP2	P10663	115 aa	Predicted RBP	4.13	□□□□□ -1.75
VMA7	YGR020C	YCR006C	P25350	157 aa		4.13	□□□□□ -1.75
VMA7	YGR020C	PIG1	Q06216	648 aa		4.13	□□□□□ -1.75
VMA7	YGR020C	SWA2	Q06677	668 aa		4.13	□□□□□ -1.75
VMA7	YGR020C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
VMA7	YGR020C	DBF20	P32328	564 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	GEX2	P36173	615 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	VPS41	P38959	992 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	TPM2	P40414	161 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	LYS20	P48570	428 aa	Known RBP	4.12	□□□□□ -1.75
VMA7	YGR020C	UBP8	P50102	471 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	CSL4	P53859	292 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA7	YGR020C	UBX3	Q12229	455 aa		4.12	□□□□□ -1.75
VMA7	YGR020C	TPK1	P06244	397 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	MTF2	P10849	440 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	UBC1	P21734	215 aa	Known RBP	4.11	□□□□□ -1.75
VMA7	YGR020C	PTH2	P34222	208 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	PXL1	P36166	706 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	GND1	P38720	489 aa	Known RBP	4.11	□□□□□ -1.75
VMA7	YGR020C	ASE1	P50275	885 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	COG1	P53079	417 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	EAF7	P53911	425 aa	Known RBP	4.11	□□□□□ -1.75
VMA7	YGR020C	BOP3	P53958	396 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	SNA4	Q07549	140 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	YLR049C	Q12110	428 aa		4.11	□□□□□ -1.75
VMA7	YGR020C	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-LR1	P0C2J4	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-F	P0CX61	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-GR2	P0CX62	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-C	P25383	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	RAD16	P31244	790 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	ATO2	P32907	282 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	ADE17	P38009	592 aa	Known RBP	4.1	□□□□□ -1.75
VMA7	YGR020C	UBP13	P38187	747 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	SMK1	P41808	388 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	VPS25	P47142	202 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	YGL036W	P53185	909 aa	Predicted RBP	4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-DR2	Q03483	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	IOC4	Q04213	475 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	SWF1	Q04629	336 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	YLR455W	Q06188	304 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	CRN1	Q06440	651 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	GSH2	Q08220	491 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TMA16	Q08687	178 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	FRE3	Q08905	711 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-B	Q12260	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-OR2	Q12293	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-DR1	Q12392	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-OR1	Q12439	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	PCD1	Q12524	340 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	TY2A-DR3	Q99303	438 aa		4.1	□□□□□ -1.75
VMA7	YGR020C	YER145C-A	A0A023PYF4	145 aa		4.09	□□□□□ -1.75
VMA7	YGR020C	LHS1	P36016	881 aa		4.09	□□□□□ -1.75
VMA7	YGR020C	IFA38	P38286	347 aa		4.09	□□□□□ -1.75
VMA7	YGR020C	CSR1	Q06705	408 aa	Known RBP	4.09	□□□□□ -1.75
VMA7	YGR020C	SRP54	P20424	541 aa	Known RBP	4.08	□□□□□ -1.76
VMA7	YGR020C	XRS2	P33301	854 aa		4.08	□□□□□ -1.76
VMA7	YGR020C	MRX1	P40050	688 aa		4.08	□□□□□ -1.76

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