RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W YOR131CQ12486 218 aa5.07□□□□□ -1.6
CDC4YFL009W IPP1P00817 287 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W CIT1P00890 479 aa5.07□□□□□ -1.6
CDC4YFL009W MF(ALPHA)1P01149 165 aa5.07□□□□□ -1.6
CDC4YFL009W THS1P04801 734 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W ILS1P09436 1072 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W HSF1P10961 833 aa5.07□□□□□ -1.6
CDC4YFL009W RIT1P23796 513 aa5.07□□□□□ -1.6
CDC4YFL009W DGR2P32330 852 aa5.07□□□□□ -1.6
CDC4YFL009W GYP6P32806 458 aa5.07□□□□□ -1.6
CDC4YFL009W LRG1P35688 1017 aa5.07□□□□□ -1.6
CDC4YFL009W BET3P36149 193 aa5.07□□□□□ -1.6
CDC4YFL009W APD1P38281 316 aa5.07□□□□□ -1.6
CDC4YFL009W LSM12P38828 187 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W MNN1P39106 762 aa5.07□□□□□ -1.6
CDC4YFL009W UTP18P40362 594 aaPredicted RBP5.07□□□□□ -1.6
CDC4YFL009W FET4P40988 552 aa5.07□□□□□ -1.6
CDC4YFL009W MAL11P53048 616 aa5.07□□□□□ -1.6
CDC4YFL009W PRO2P54885 456 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W EMI2Q04409 500 aaKnown RBP5.07□□□□□ -1.6
CDC4YFL009W INM2Q05533 292 aa5.07□□□□□ -1.6
CDC4YFL009W ARR2Q06597 130 aa5.07□□□□□ -1.6
CDC4YFL009W YDL073WQ07454 984 aa5.07□□□□□ -1.6
CDC4YFL009W ATG29Q12092 213 aa5.07□□□□□ -1.6
CDC4YFL009W TUB1P09733 447 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W RRT12P25381 491 aa5.06□□□□□ -1.6
CDC4YFL009W TFC1P32367 649 aa5.06□□□□□ -1.6
CDC4YFL009W HXT3P32466 567 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W ARC19P33204 171 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W DOM34P33309 386 aa5.06□□□□□ -1.6
CDC4YFL009W YKL023WP36103 277 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W GLG1P36143 616 aa5.06□□□□□ -1.6
CDC4YFL009W PDX3P38075 228 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W MTG2P38860 518 aa5.06□□□□□ -1.6
CDC4YFL009W ESL1P40456 1118 aa5.06□□□□□ -1.6
CDC4YFL009W BNA3P47039 444 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W CEG1Q01159 459 aaPredicted RBP5.06□□□□□ -1.6
CDC4YFL009W SED5Q01590 340 aa5.06□□□□□ -1.6
CDC4YFL009W SLU7Q02775 382 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W COQ9Q05779 260 aa5.06□□□□□ -1.6
CDC4YFL009W DIA2Q08496 732 aaPredicted RBP5.06□□□□□ -1.6
CDC4YFL009W YRM1Q12340 786 aa5.06□□□□□ -1.6
CDC4YFL009W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6 RIP-Chip
CDC4YFL009W PHO8P11491 566 aa5.06□□□□□ -1.6
CDC4YFL009W DAP2P18962 818 aa5.06□□□□□ -1.6
CDC4YFL009W KIN3P22209 435 aa5.06□□□□□ -1.6
CDC4YFL009W CMK2P22517 447 aa5.06□□□□□ -1.6
CDC4YFL009W VPS3P23643 1011 aa5.06□□□□□ -1.6
CDC4YFL009W NAT2P37293 288 aa5.06□□□□□ -1.6
CDC4YFL009W PFF1P38244 976 aa5.06□□□□□ -1.6
CDC4YFL009W SPC97P38863 823 aa5.06□□□□□ -1.6
CDC4YFL009W YJL070CP40361 888 aa5.06□□□□□ -1.6
CDC4YFL009W MAM33P40513 266 aa5.06□□□□□ -1.6
CDC4YFL009W GLG2P47011 380 aa5.06□□□□□ -1.6
CDC4YFL009W YGR125WP53273 1036 aa5.06□□□□□ -1.6
CDC4YFL009W RET3P53600 189 aa5.06□□□□□ -1.6
CDC4YFL009W CBK1P53894 756 aa5.06□□□□□ -1.6
CDC4YFL009W ASI2P53895 289 aa5.06□□□□□ -1.6
CDC4YFL009W MYO5Q04439 1219 aaKnown RBP5.06□□□□□ -1.6
CDC4YFL009W BCP1Q06338 283 aa5.06□□□□□ -1.6
CDC4YFL009W YPR196WQ06595 470 aa5.06□□□□□ -1.6
CDC4YFL009W YPR202WQ08993 238 aa5.06□□□□□ -1.6
CDC4YFL009W HER1Q12276 1246 aa5.06□□□□□ -1.6
CDC4YFL009W NTO1Q12311 748 aa5.06□□□□□ -1.6
CDC4YFL009W VCX1Q99385 411 aa5.06□□□□□ -1.6
CDC4YFL009W YLR278CQ05854 1341 aa5.06□□□□□ -1.6
CDC4YFL009W INO1P11986 533 aa5.05□□□□□ -1.6
CDC4YFL009W KSS1P14681 368 aa5.05□□□□□ -1.6
CDC4YFL009W CAD1P24813 409 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W GBP2P25555 427 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
CDC4YFL009W SPB1P25582 841 aaPredicted RBP5.05□□□□□ -1.6
CDC4YFL009W AAD3P25612 363 aa5.05□□□□□ -1.6
CDC4YFL009W TRK2P28584 889 aa5.05□□□□□ -1.6
CDC4YFL009W PRO3P32263 286 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W CUE2P36075 443 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W YPK3P38070 525 aa5.05□□□□□ -1.6
CDC4YFL009W APE4P38821 490 aa5.05□□□□□ -1.6
CDC4YFL009W SAD1P43589 448 aa5.05□□□□□ -1.6
CDC4YFL009W FAR7P43592 221 aa5.05□□□□□ -1.6
CDC4YFL009W SSN8P47821 323 aa5.05□□□□□ -1.6
CDC4YFL009W PAN2P53010 1115 aaPredicted RBP5.05□□□□□ -1.6
CDC4YFL009W YMR265CQ03508 461 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W RVB1Q03940 463 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W YMR027WQ04371 470 aa5.05□□□□□ -1.6
CDC4YFL009W ARP9Q05123 467 aa5.05□□□□□ -1.6
CDC4YFL009W BRE4Q07660 1125 aa5.05□□□□□ -1.6
CDC4YFL009W APC5Q08683 685 aa5.05□□□□□ -1.6
CDC4YFL009W CLP1Q08685 445 aaPredicted RBP5.05□□□□□ -1.6
CDC4YFL009W TEF1P02994 458 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W RPP1AP05318 106 aaPredicted RBP5.05□□□□□ -1.6
CDC4YFL009W DED1P06634 604 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W YEL076C-AP0CX16 216 aa5.05□□□□□ -1.6
CDC4YFL009W YLR464WP0CX17 216 aa5.05□□□□□ -1.6
CDC4YFL009W MRP13P12686 339 aa5.05□□□□□ -1.6
CDC4YFL009W FPS1P23900 669 aa5.05□□□□□ -1.6
CDC4YFL009W CAP1P28495 268 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W CRM1P30822 1084 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W MET22P32179 357 aa5.05□□□□□ -1.6
CDC4YFL009W KAP104P38217 918 aaKnown RBP5.05□□□□□ -1.6
CDC4YFL009W RFS1P38234 210 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms