RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C PUT4P15380 627 aa3.19□□□□□ -1.9
VPS3YDR495C PHO91P27514 894 aa3.19□□□□□ -1.9
VPS3YDR495C SFB3P38810 929 aa3.19□□□□□ -1.9
VPS3YDR495C SPT8P38915 602 aa3.19□□□□□ -1.9
VPS3YDR495C CAK1P43568 368 aaPredicted RBP3.19□□□□□ -1.9
VPS3YDR495C AAD10P47182 288 aa3.19□□□□□ -1.9
VPS3YDR495C RHO5P53879 331 aaKnown RBP3.19□□□□□ -1.9
VPS3YDR495C YMR265CQ03508 461 aaKnown RBP3.19□□□□□ -1.9
VPS3YDR495C YML037CQ03703 340 aa3.19□□□□□ -1.9
VPS3YDR495C RBA50Q04418 439 aa3.19□□□□□ -1.9
VPS3YDR495C MRD1Q06106 887 aaKnown RBP3.19□□□□□ -1.9
VPS3YDR495C YEH1Q07804 573 aa3.19□□□□□ -1.9
VPS3YDR495C ERG27Q12452 347 aaKnown RBP3.19□□□□□ -1.9
VPS3YDR495C SPE4Q12455 300 aa3.19□□□□□ -1.9
VPS3YDR495C YJR112W-AQ3E743 109 aa3.19□□□□□ -1.9
VPS3YDR495C YOR019WQ99248 730 aa3.19□□□□□ -1.9
VPS3YDR495C PMT1P33775 817 aa3.18□□□□□ -1.9
VPS3YDR495C MIC60P36112 540 aa3.18□□□□□ -1.9
VPS3YDR495C CDS1P38221 457 aa3.18□□□□□ -1.9
VPS3YDR495C COS111P38308 924 aa3.18□□□□□ -1.9
VPS3YDR495C TDP1P38319 544 aa3.18□□□□□ -1.9
VPS3YDR495C YDR089WP38966 869 aa3.18□□□□□ -1.9
VPS3YDR495C MPT5P39016 859 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS3YDR495C AFG3P39925 761 aa3.18□□□□□ -1.9
VPS3YDR495C ZRG8P40021 1076 aa3.18□□□□□ -1.9
VPS3YDR495C PCL8Q08966 492 aa3.18□□□□□ -1.9
VPS3YDR495C PNO1Q99216 274 aaKnown RBP3.18□□□□□ -1.9
VPS3YDR495C RPL3P14126 387 aaKnown RBP3.18□□□□□ -1.9
VPS3YDR495C DMC1P25453 334 aa3.18□□□□□ -1.9
VPS3YDR495C PRE2P30656 287 aaKnown RBP3.18□□□□□ -1.9
VPS3YDR495C PRE4P30657 266 aa3.18□□□□□ -1.9
VPS3YDR495C NTG1P31378 399 aa3.18□□□□□ -1.9
VPS3YDR495C ATG19P35193 415 aa3.18□□□□□ -1.9
VPS3YDR495C CST26P38226 397 aa3.18□□□□□ -1.9
VPS3YDR495C RRT2P38332 387 aa3.18□□□□□ -1.9
VPS3YDR495C ERC1P38767 581 aa3.18□□□□□ -1.9
VPS3YDR495C RPA49Q01080 415 aaPredicted RBP3.18□□□□□ -1.9
VPS3YDR495C RRT8Q08219 342 aa3.18□□□□□ -1.9
VPS3YDR495C YPT6Q99260 215 aa3.18□□□□□ -1.9
VPS3YDR495C VCX1Q99385 411 aa3.18□□□□□ -1.9
VPS3YDR495C GAL80P04387 435 aa3.17□□□□□ -1.9
VPS3YDR495C ADE2P21264 571 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C CHL1P22516 861 aaPredicted RBP3.17□□□□□ -1.9
VPS3YDR495C MRPL25P23369 157 aa3.17□□□□□ -1.9
VPS3YDR495C MRP4P32902 394 aa3.17□□□□□ -1.9
VPS3YDR495C SRB2P34162 210 aa3.17□□□□□ -1.9
VPS3YDR495C EHT1P38295 451 aa3.17□□□□□ -1.9
VPS3YDR495C SLZ1P40167 298 aa3.17□□□□□ -1.9
VPS3YDR495C LRO1P40345 661 aa3.17□□□□□ -1.9
VPS3YDR495C FKH1P40466 484 aa3.17□□□□□ -1.9
VPS3YDR495C ARP5P53946 755 aa3.17□□□□□ -1.9
VPS3YDR495C YPL108WQ02872 168 aaPredicted RBP3.17□□□□□ -1.9
VPS3YDR495C ATG38Q05789 226 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C ATG29Q12092 213 aa3.17□□□□□ -1.9
VPS3YDR495C DFR1P07807 211 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
VPS3YDR495C ARO3P14843 370 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C ERG6P25087 383 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C WHI3P34761 661 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C PKP1P40530 394 aa3.17□□□□□ -1.9
VPS3YDR495C VMA13P41807 478 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C YGR066CP53242 292 aa3.17□□□□□ -1.9
VPS3YDR495C LSC1P53598 329 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C DSE4P53753 1117 aa3.17□□□□□ -1.9
VPS3YDR495C ADE12P80210 433 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C PPM1Q04081 328 aa3.17□□□□□ -1.9
VPS3YDR495C MGR3Q04472 501 aa3.17□□□□□ -1.9
VPS3YDR495C MRPL1Q04599 285 aa3.17□□□□□ -1.9
VPS3YDR495C VPS38Q05919 439 aa3.17□□□□□ -1.9
VPS3YDR495C AIM6Q07716 390 aa3.17□□□□□ -1.9
VPS3YDR495C SOD2P00447 233 aa3.17□□□□□ -1.9
VPS3YDR495C RPS9BP05755 195 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C LPD1P09624 499 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C CAF20P12962 161 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C NAR1P23503 491 aaKnown RBP3.17□□□□□ -1.9
VPS3YDR495C THI2P38141 450 aa3.17□□□□□ -1.9
VPS3YDR495C AKR1P39010 764 aa3.17□□□□□ -1.9
VPS3YDR495C PZF1P39933 429 aa3.17□□□□□ -1.9
VPS3YDR495C YDL183CP48569 320 aa3.17□□□□□ -1.9
VPS3YDR495C RAD17P48581 401 aa3.17□□□□□ -1.9
VPS3YDR495C ASE1P50275 885 aa3.17□□□□□ -1.9
VPS3YDR495C AQR1P53943 586 aa3.17□□□□□ -1.9
VPS3YDR495C MUB1Q03162 620 aa3.17□□□□□ -1.9
VPS3YDR495C INP2Q03824 705 aa3.17□□□□□ -1.9
VPS3YDR495C PPN1Q04119 674 aa3.17□□□□□ -1.9
VPS3YDR495C VPS54Q12071 889 aa3.17□□□□□ -1.9
VPS3YDR495C TY3A-GQ12173 290 aa3.17□□□□□ -1.9
VPS3YDR495C UBX3Q12229 455 aa3.17□□□□□ -1.9
VPS3YDR495C TY3A-IQ99219 290 aa3.17□□□□□ -1.9
VPS3YDR495C YML133CQ03099 1374 aa3.16□□□□□ -1.9
VPS3YDR495C YLL067CQ07888 1374 aa3.16□□□□□ -1.9
VPS3YDR495C YLL066CQ99208 1374 aa3.16□□□□□ -1.9
VPS3YDR495C PRP2P20095 876 aaPredicted RBP3.16□□□□□ -1.9
VPS3YDR495C PRP45P28004 379 aaPredicted RBP3.16□□□□□ -1.9
VPS3YDR495C COY1P34237 679 aa3.16□□□□□ -1.9
VPS3YDR495C CCL1P37366 393 aa3.16□□□□□ -1.9
VPS3YDR495C TAT1P38085 619 aa3.16□□□□□ -1.9
VPS3YDR495C YHL017WP38745 532 aa3.16□□□□□ -1.9
VPS3YDR495C YHR078WP38799 552 aa3.16□□□□□ -1.9
VPS3YDR495C YER034WP40022 185 aaKnown RBP3.16□□□□□ -1.9
VPS3YDR495C ASG1P40467 964 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms