RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W PRP22P24384 1145 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W MGM1P32266 881 aa2.31□□□□□ -2.04
MCD1YDL003W YKL091CP33324 310 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W PEX5P35056 612 aa2.31□□□□□ -2.04
MCD1YDL003W YKR075CP36155 307 aa2.31□□□□□ -2.04
MCD1YDL003W PCH2P38126 564 aa2.31□□□□□ -2.04
MCD1YDL003W FZO1P38297 855 aa2.31□□□□□ -2.04
MCD1YDL003W DSS1P39112 969 aa2.31□□□□□ -2.04
MCD1YDL003W TIF4631P39935 952 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W MRX1P40050 688 aa2.31□□□□□ -2.04
MCD1YDL003W VID28P40547 921 aa2.31□□□□□ -2.04
MCD1YDL003W PHB1P40961 287 aa2.31□□□□□ -2.04
MCD1YDL003W MIC19P43594 170 aa2.31□□□□□ -2.04
MCD1YDL003W FYV8P46949 817 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W ZPR1P53303 486 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W COQ6P53318 479 aa2.31□□□□□ -2.04
MCD1YDL003W COP1P53622 1201 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W ALF1P53904 254 aa2.31□□□□□ -2.04
MCD1YDL003W HEF3P53978 1044 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W YKR005CQ02203 525 aa2.31□□□□□ -2.04
MCD1YDL003W ADA2Q02336 434 aa2.31□□□□□ -2.04
MCD1YDL003W WAR1Q03631 944 aa2.31□□□□□ -2.04
MCD1YDL003W GFD1Q04839 188 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W SFH1Q06168 426 aa2.31□□□□□ -2.04
MCD1YDL003W SEC10Q06245 871 aa2.31□□□□□ -2.04
MCD1YDL003W RTT109Q07794 436 aa2.31□□□□□ -2.04
MCD1YDL003W YPL216WQ08964 1102 aa2.31□□□□□ -2.04
MCD1YDL003W APL4Q12028 832 aa2.31□□□□□ -2.04
MCD1YDL003W NUR1Q12066 484 aa2.31□□□□□ -2.04
MCD1YDL003W YLR125WQ12138 136 aa2.31□□□□□ -2.04
MCD1YDL003W TY3B-GQ99315 1547 aa2.31□□□□□ -2.04
MCD1YDL003W RAV1P47104 1357 aa2.31□□□□□ -2.04
MCD1YDL003W ATG2P53855 1592 aa2.31□□□□□ -2.04
MCD1YDL003W ULS1Q08562 1619 aa2.31□□□□□ -2.04
MCD1YDL003W YSP2Q06681 1438 aa2.31□□□□□ -2.04
MCD1YDL003W LEU2P04173 364 aaPredicted RBP2.31□□□□□ -2.04
MCD1YDL003W WHI2P12611 486 aa2.31□□□□□ -2.04
MCD1YDL003W GCN3P14741 305 aa2.31□□□□□ -2.04
MCD1YDL003W SEC63P14906 663 aa2.31□□□□□ -2.04
MCD1YDL003W MIH1P23748 554 aa2.31□□□□□ -2.04
MCD1YDL003W CLB2P24869 491 aa2.31□□□□□ -2.04
MCD1YDL003W GSY2P27472 705 aa2.31□□□□□ -2.04
MCD1YDL003W ITR2P30606 609 aa2.31□□□□□ -2.04
MCD1YDL003W SIN4P32259 974 aa2.31□□□□□ -2.04
MCD1YDL003W VPH2P32341 215 aa2.31□□□□□ -2.04
MCD1YDL003W SMI1P32566 505 aa2.31□□□□□ -2.04
MCD1YDL003W PET127P32606 800 aa2.31□□□□□ -2.04
MCD1YDL003W UBC6P33296 250 aaPredicted RBP2.31□□□□□ -2.04
MCD1YDL003W CSE1P33307 960 aa2.31□□□□□ -2.04
MCD1YDL003W COY1P34237 679 aa2.31□□□□□ -2.04
MCD1YDL003W KES1P35844 434 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W KDX1P36005 433 aa2.31□□□□□ -2.04
MCD1YDL003W SRL3P36167 246 aa2.31□□□□□ -2.04
MCD1YDL003W JNM1P36224 373 aa2.31□□□□□ -2.04
MCD1YDL003W HEK2P38199 381 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
MCD1YDL003W FLO5P38894 1075 aa2.31□□□□□ -2.04
MCD1YDL003W BUD16P39988 312 aa2.31□□□□□ -2.04
MCD1YDL003W SCS2P40075 244 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W RPT2P40327 437 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W STB1P42845 420 aa2.31□□□□□ -2.04
MCD1YDL003W LAM5P43560 674 aa2.31□□□□□ -2.04
MCD1YDL003W VTC2P43585 828 aa2.31□□□□□ -2.04
MCD1YDL003W YPT11P48559 417 aa2.31□□□□□ -2.04
MCD1YDL003W CTF18P49956 741 aa2.31□□□□□ -2.04
MCD1YDL003W KAP114P53067 1004 aa2.31□□□□□ -2.04
MCD1YDL003W YIP4P53093 235 aa2.31□□□□□ -2.04
MCD1YDL003W BNI5P53890 448 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W FIN1Q03898 291 aa2.31□□□□□ -2.04
MCD1YDL003W VAC14Q06708 880 aa2.31□□□□□ -2.04
MCD1YDL003W BRE1Q07457 700 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W RIX7Q07844 837 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W CTI6Q08923 506 aa2.31□□□□□ -2.04
MCD1YDL003W BUG1Q12191 341 aa2.31□□□□□ -2.04
MCD1YDL003W APC2Q12440 853 aa2.31□□□□□ -2.04
MCD1YDL003W NCB2Q92317 146 aa2.31□□□□□ -2.04
MCD1YDL003W RPL6BP05739 176 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W PET122P10355 254 aa2.3□□□□□ -2.04
MCD1YDL003W NMT1P14743 455 aa2.3□□□□□ -2.04
MCD1YDL003W RPB4P20433 221 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W REC107P21651 314 aa2.3□□□□□ -2.04
MCD1YDL003W RDS1P25611 832 aa2.3□□□□□ -2.04
MCD1YDL003W SRP40P32583 406 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W SAC6P32599 642 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W VMA8P32610 256 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W ARC19P33204 171 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W NIP100P33420 868 aa2.3□□□□□ -2.04
MCD1YDL003W SPP381P38282 291 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W YBR242WP38331 238 aa2.3□□□□□ -2.04
MCD1YDL003W EFM2P38347 419 aa2.3□□□□□ -2.04
MCD1YDL003W PCF11P39081 626 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W EXO1P39875 702 aa2.3□□□□□ -2.04
MCD1YDL003W TMN3P40071 706 aa2.3□□□□□ -2.04
MCD1YDL003W PDS1P40316 373 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W OPT1P40897 799 aa2.3□□□□□ -2.04
MCD1YDL003W BUD6P41697 788 aa2.3□□□□□ -2.04
MCD1YDL003W ALB1P47019 175 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W VMA10P48836 114 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W ORM1P53224 222 aa2.3□□□□□ -2.04
MCD1YDL003W YGR266WP53326 701 aa2.3□□□□□ -2.04
MCD1YDL003W COS6P53344 381 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms