RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	TEL1	P38110	2787 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	CMD1	P06787	147 aa	Known RBP	5.86	□□□□□ -1.47
ATG12	YBR217W	GCR1	P07261	785 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	YML002W	P0CF17	737 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	IMA3	P0CW40	589 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	IMA4	P0CW41	589 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	CDC20	P26309	610 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	AEP1	P32493	518 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	PHO11	P35842	467 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	TAE1	P38340	232 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	PHO12	P38693	467 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	MSR1	P38714	643 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	RGI2	P40188	164 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	TIF34	P40217	347 aa	Known RBP	5.86	□□□□□ -1.47
ATG12	YBR217W	YFL012W	P43580	148 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	COQ5	P49017	307 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	NBP35	P52920	328 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	COG1	P53079	417 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	SPC105	P53148	917 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	SNO2	P53823	222 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	MET14	Q02196	202 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	NUP100	Q02629	959 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	YDR132C	Q03900	495 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	PPN1	Q04119	674 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	RRB1	Q04225	511 aa	Known RBP	5.86	□□□□□ -1.47
ATG12	YBR217W	ATG10	Q07879	167 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	IMA2	Q08295	589 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	RMP1	Q12530	201 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	NAG1	Q8TGN9	163 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	YLR149C	Q99296	730 aa		5.86	□□□□□ -1.47
ATG12	YBR217W	SPO16	P17122	198 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	CHL1	P22516	861 aa	Predicted RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	YSP3	P25036	478 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	YCL068C	P25593	260 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	HEM12	P32347	362 aa	Predicted RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	SRP101	P32916	621 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	UBC6	P33296	250 aa	Predicted RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	CNS1	P33313	385 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	YBR259W	P38338	688 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	LRP1	P38801	184 aa	Known RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	SET2	P46995	733 aa	Known RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	MNN10	P50108	393 aa	Known RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	RTA1	P53047	317 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	PCL10	P53124	433 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	VPS60	Q03390	229 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	GSF2	Q04697	403 aa	Known RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	BUD20	Q08004	166 aa	Predicted RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	SLD7	Q08457	257 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	HOS1	Q12214	470 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	NOP14	Q99207	810 aa	Known RBP	5.85	□□□□□ -1.47
ATG12	YBR217W	YOR338W	Q99326	363 aa		5.85	□□□□□ -1.47
ATG12	YBR217W	SPT15	P13393	240 aa	Known RBP	5.84	□□□□□ -1.47
ATG12	YBR217W	TPS2	P31688	896 aa	Known RBP	5.84	□□□□□ -1.47
ATG12	YBR217W	PLC1	P32383	869 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	YEL043W	P32618	956 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	TFB1	P32776	642 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	PFS1	P38872	237 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	DPH1	P40487	425 aa	Known RBP	5.84	□□□□□ -1.47
ATG12	YBR217W	RPL34B	P40525	121 aa	Known RBP	5.84	□□□□□ -1.47
ATG12	YBR217W	MTO1	P53070	669 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	SWC4	P53201	476 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	MAL13	P53338	473 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	CPR6	P53691	371 aa	Known RBP	5.84	□□□□□ -1.47
ATG12	YBR217W	FRE4	P53746	719 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	YNL143C	P53908	130 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	COG6	P53959	839 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	TRS31	Q03337	283 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	YDR131C	Q03899	556 aa		5.84	□□□□□ -1.47
ATG12	YBR217W	HFA1	P32874	2273 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	TEF1	P02994	458 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	PET111	P08468	800 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	RPB2	P08518	1224 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	PEP5	P12868	1029 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	GAL11	P19659	1081 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	UBA1	P22515	1024 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	EMC1	P25574	760 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	CIN8	P27895	1000 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	URA7	P28274	579 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	MRPL9	P31334	269 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	SMI1	P32566	505 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	IMP3	P32899	183 aa	Predicted RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	LAS1	P36146	502 aa	Predicted RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	OLA1	P38219	394 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	SRP72	P38688	640 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	TIM17	P39515	158 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	MEF2	P39677	819 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	SEO1	P39709	593 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	INA22	P40576	216 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	NOP15	P53927	220 aa	Predicted RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	EFM6	P53970	246 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	RPL22B	P56628	122 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	RPN9	Q04062	393 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	MCP2	Q06567	569 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	PIN2	Q12057	282 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	RIO1	Q12196	484 aa	Known RBP	5.83	□□□□□ -1.48
ATG12	YBR217W	YEL077C	Q3E7X8	1277 aa		5.83	□□□□□ -1.48
ATG12	YBR217W	COX3	P00420	269 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	SUC2	P00724	532 aa		5.82	□□□□□ -1.48
ATG12	YBR217W	ERG20	P08524	352 aa	Known RBP	5.82	□□□□□ -1.48
ATG12	YBR217W	AMD1	P15274	810 aa	Known RBP	5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms