RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MCM4P33991 863 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 CABP4P57796 275 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 SPRED3Q2MJR0 410 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 SEZ6Q53EL9 994 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 SMC1BQ8NDV3 1235 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 UBE2OQ9C0C9 1292 aaKnown RBP6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 MRVI1Q9Y6F6 885 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 PRAG1Q86YV5 1406 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 ARHGEF5Q12774 1597 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 METP08581 1390 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 SBF2Q86WG5 1849 aa6.55□□□□□ -1.36
HMGB1P23-201ENST00000518743 OVOS2A0A0G2JMS6 1433 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 OVOS2A0A0J9YW53 1432 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 OVOS2Q6IE36 1432 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 F6X3S4 739 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 PPP1R12AO14974 1030 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 EIF2AK2P19525 551 aaKnown RBP6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 CD33P20138 364 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 GIPRP48546 466 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 CHMP4BP1P59074 171 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 AP3B2Q13367 1082 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 FXNQ16595 210 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 DBN1Q16643 649 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 LRRFIP1Q32MZ4 808 aaKnown RBP6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 LLGL2Q6P1M3 1020 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 CCDC155Q8N6L0 562 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 ABHD17AQ96GS6 310 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 SHDQ96IW2 340 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 RASSF4Q9H2L5 321 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 PRDM11Q9NQV5 511 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 ACTR10Q9NZ32 417 aa6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 MRPL42Q9Y6G3 142 aaKnown RBP6.54□□□□□ -1.36
HMGB1P23-201ENST00000518743 PITPNM2Q9BZ72 1349 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 SOBPA7XYQ1 873 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 CILPO75339 1184 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 IGBP1P78318 339 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 PCDH1Q08174 1060 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 ARSHQ5FYA8 562 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 ZNF468Q5VIY5 522 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 CEP135Q66GS9 1140 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 REC114Q7Z4M0 266 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 RBBP8NLQ8NC74 664 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 SLC17A8Q8NDX2 589 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 GCC1Q96CN9 775 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 SNTG2Q9NY99 539 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 FRRS1LQ9P0K9 344 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 LMTK2Q8IWU2 1503 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 ARHGEF10O15013 1369 aa6.53□□□□□ -1.36
HMGB1P23-201ENST00000518743 CASKIN1Q8WXD9 1431 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 DUOX2Q9NRD8 1548 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 FAM221AA4D161 298 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 METTL12A8MUP2 240 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 F13A1P00488 732 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 THBS1P07996 1170 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ACPPP15309 386 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ITGA6P23229 1130 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ARNTP27540 789 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 EVA1CP58658 441 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 TCEAL1Q15170 157 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 PTPROQ16827 1216 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 FBXW10Q5XX13 1052 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 PTF1AQ7RTS3 328 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 C19orf47Q8N9M1 422 aaKnown RBP6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 TNFRSF25Q93038 417 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZNF837Q96EG3 531 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ADAM19Q9H013 955 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 DNAJB12Q9NXW2 375 aaKnown RBP6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZNRF3Q9ULT6 936 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 NSFL1CQ9UNZ2 370 aaKnown RBP6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 SLC12A7Q9Y666 1083 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
HMGB1P23-201ENST00000518743 NRXN3Q9Y4C0 1643 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 CRKP46108 304 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 ARL4DP49703 201 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 ANAPC15P60006 121 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 FAAP100Q0VG06 881 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 RASA3Q14644 834 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 DDR2Q16832 855 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 PLEKHG4Q58EX7 1191 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 HP1BP3Q5SSJ5 553 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 ELMSAN1Q6PJG2 1045 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 ZNF662Q6ZS27 426 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 SYT9Q86SS6 491 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 FAM35AQ86V20 835 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 TTC9Q92623 222 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 APPBP2Q92624 585 aa6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P23-201ENST00000518743 KCNB2Q92953 911 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms