RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HLA-DOAP06340 250 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ZSCAN22P10073 491 aaPredicted RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 HSPA8P11142 646 aaKnown RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 FKBP1AP62942 108 aaKnown RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 HAUS7Q99871 368 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 TRIM17Q9Y577 477 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 A0A1B0GUL6 1792 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 UNC80Q8N2C7 3258 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 BTBD19C9JJ37 291 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 GPAA1O43292 621 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 SOX10P56693 466 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 UBE2HP62256 183 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 HDLBPQ00341 1268 aaKnown RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 CTDSPL2Q05D32 466 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 TTF1Q15361 905 aaPredicted RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 FAM47AQ5JRC9 791 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 TREML2Q5T2D2 321 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 ATL3Q6DD88 541 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 ZSCAN30Q86W11 494 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 JMYQ8N9B5 988 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 CD99L2Q8TCZ2 262 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 DNAJC18Q9H819 358 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 SUGT1Q9Y2Z0 365 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 U3KPZ7 1027 aaPredicted RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 ADD2P35612 726 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 MAP2K2P36507 400 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 PLS1Q14651 629 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 SEPT2Q15019 361 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 CERKLQ49MI3 558 aaPredicted RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 CCDC183Q5T5S1 534 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 LDLRAD1Q5T700 205 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 FAM83AQ86UY5 434 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 IFNL1Q8IU54 200 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 ANKRD13CQ8N6S4 541 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 GPT2Q8TD30 523 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 ACER1Q8TDN7 264 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 RIOK1Q9BRS2 568 aaKnown RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 LLPHQ9BRT6 129 aaKnown RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 MKNK2Q9HBH9 465 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 DCP1AQ9NPI6 582 aaPredicted RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 PDRG1Q9NUG6 133 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 PI4KBQ9UBF8 816 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 BIN2Q9UBW5 565 aaPredicted RBP5.56□□□□□ -1.52
EDEM3-203ENST00000439962 SERPINB13Q9UIV8 391 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 SMC3Q9UQE7 1217 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 GAKO14976 1311 aa5.56□□□□□ -1.52
EDEM3-203ENST00000439962 A0A0D9SFI3 127 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 PDHXO00330 501 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 STX6O43752 255 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF500O60304 480 aaPredicted RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 CAVIN2O95810 425 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 F13A1P00488 732 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 TPM3P06753 285 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 PTPRAP18433 802 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 AK2P54819 239 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 CAP1Q01518 475 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 RASGRP2Q7LDG7 609 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF589Q86UQ0 364 aaPredicted RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 ERO1BQ86YB8 467 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 GZF1Q9H116 711 aaPredicted RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 HELLSQ9NRZ9 838 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 CCDC39Q9UFE4 941 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 KIF3AQ9Y496 699 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 SALL1Q9NSC2 1324 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 TRPM7Q96QT4 1865 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 NMT2O60551 498 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 PRPF40AO75400 957 aaKnown RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 SREBF2Q12772 1141 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 CAVIN1Q6NZI2 390 aaKnown RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 CCAR1Q8IX12 1150 aaKnown RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 KBTBD3Q8NAB2 608 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 NUP88Q99567 741 aaPredicted RBP5.55□□□□□ -1.52
EDEM3-203ENST00000439962 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 NAPBQ9H115 298 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 TSPY26PQ9H489 355 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 WDR19Q8NEZ3 1342 aa5.55□□□□□ -1.52
EDEM3-203ENST00000439962 XIRP2A4UGR9 3374 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 PHF20L1A8MW92 1017 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RNF113AO15541 343 aaKnown RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 RANBP6O60518 1105 aaKnown RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 KDM4AO75164 1064 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 FMNL1O95466 1100 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 TPM2P07951 284 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 AKR1B1P15121 316 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 PLCG2P16885 1265 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 FKBP1BP68106 108 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 IKQ13123 557 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 NMIQ13287 307 aaPredicted RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 SNAPC2Q13487 334 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 ABCB5Q2M3G0 1257 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 CREB3L3Q68CJ9 461 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 MS4A4AQ96JQ5 239 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 DSCC1Q9BVC3 393 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 NOL7Q9UMY1 257 aaKnown RBP5.54□□□□□ -1.52
EDEM3-203ENST00000439962 STX8Q9UNK0 236 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 TRIOBPQ9H2D6 2365 aa5.54□□□□□ -1.52
EDEM3-203ENST00000439962 AKAP11Q9UKA4 1901 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 502.8 ms