RNA–Protein interactions for RNA: ENSMUST00000208530.1

Clhc1-204, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clhc1, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-204ENSMUST00000208530 H2al1kJ3QP08 105 aa1.68□□□□□ -2.14
Clhc1-204ENSMUST00000208530 Krtap13-1Q8K198 168 aa1.65□□□□□ -2.14
Clhc1-204ENSMUST00000208530 ZanO88799 5376 aa1.65□□□□□ -2.14
Clhc1-204ENSMUST00000208530 Mp68P56379 58 aa1.65□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Gm17416Q30KP4 66 aa1.65□□□□□ -2.15
Clhc1-204ENSMUST00000208530 SptssbQ925E8 76 aa1.65□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Cox6b2Q80ZN9 88 aa1.64□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Gm9789Q8BIG3 52 aa1.64□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Krtap19-1Q925H2 87 aa1.64□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Krtap19-3Q925H6 87 aa1.64□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Prm1P02319 51 aa1.63□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Gm10382Q3V0T5 144 aa1.63□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Uqcr11Q9CPX8 56 aa1.62□□□□□ -2.15
Clhc1-204ENSMUST00000208530 4933415A04RikQ9D443 101 aa1.62□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Gm7735D3YX18 52 aa1.62□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Fat4Q2PZL6 4981 aa1.61□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Camk2n1Q6QWF9 78 aa1.6□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Limd2Q8BGB5 128 aa1.6□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Ndufb1P0DN34 57 aa1.6□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Pla2g10Q9QXX3 151 aa1.6□□□□□ -2.15
Clhc1-204ENSMUST00000208530 Gm9955Q8CEJ8 102 aa1.59□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Gm12216A0A1W2P827 62 aa1.58□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Gm17606F6ZL36 78 aa1.58□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Gm20537G3UYK7 97 aa1.57□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Rnf213E9Q555 5152 aaKnown RBP1.57□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Ndufs5Q99LY9 106 aa1.55□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Krtap6-3A0A087WQL6 57 aa1.54□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Krtap4-16Q91W93 202 aa1.54□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Gm3880A0A1B0GSB3 72 aa1.54□□□□□ -2.16
Clhc1-204ENSMUST00000208530 BC029722A0A0N4SW31 51 aa1.53□□□□□ -2.16
Clhc1-204ENSMUST00000208530 Krtap1-4Q3V2D6 188 aa1.52□□□□□ -2.17
Clhc1-204ENSMUST00000208530 Gm9112A2AI92 75 aa1.51□□□□□ -2.17
Clhc1-204ENSMUST00000208530 Gm19426M0QWC7 77 aa1.51□□□□□ -2.17
Clhc1-204ENSMUST00000208530 SspoQ8CG65 4998 aa1.5□□□□□ -2.17
Clhc1-204ENSMUST00000208530 Spink7Q6IE32 76 aa1.49□□□□□ -2.17
Clhc1-204ENSMUST00000208530 CriptO70333 101 aa1.47□□□□□ -2.17
Clhc1-204ENSMUST00000208530 4933428G20RikQ9D3X4 101 aa1.47□□□□□ -2.17
Clhc1-204ENSMUST00000208530 Gm10061D3Z714 54 aa1.47□□□□□ -2.17
Clhc1-204ENSMUST00000208530 Sprr2a3Q4KL71 83 aa1.46□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Sprr2a1Q9CQK8 83 aa1.46□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Krtap19-2Q925I0 141 aa1.45□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Ndufaf8A2AMZ4 74 aa1.44□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Krtap19-9aF8WH65 55 aa1.44□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Muc5bE9Q5I3 4800 aa1.44□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Krtap20-2E9Q0A8 60 aa1.43□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Gm17402F6Z0L5 76 aa1.43□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Romo1P60603 79 aa1.41□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Macf1Q9QXZ0 7354 aaKnown RBP1.41□□□□□ -2.18
Clhc1-204ENSMUST00000208530 Gm6358A0A087WPH4 74 aa1.38□□□□□ -2.19
Clhc1-204ENSMUST00000208530 1110025L11RikO09048 78 aa1.35□□□□□ -2.19
Clhc1-204ENSMUST00000208530 Mt2P02798 61 aa1.34□□□□□ -2.19
Clhc1-204ENSMUST00000208530 Krtap21-1Q925H4 128 aa1.34□□□□□ -2.19
Clhc1-204ENSMUST00000208530 Mdn1A2ANY6 5589 aaKnown RBP1.34□□□□□ -2.2
Clhc1-204ENSMUST00000208530 Gm11938Q9D3H4 131 aa1.33□□□□□ -2.2
Clhc1-204ENSMUST00000208530 Krtap8-1O08633 61 aa1.3□□□□□ -2.2
Clhc1-204ENSMUST00000208530 NebE9Q1W3 7152 aa1.3□□□□□ -2.2
Clhc1-204ENSMUST00000208530 Gm40193A0A1B0GT39 78 aa1.3□□□□□ -2.2
Clhc1-204ENSMUST00000208530 Krtap19-9bQ99NG9 58 aa1.3□□□□□ -2.2
Clhc1-204ENSMUST00000208530 2310046K23RikA0A0A6YVW6 87 aa1.25□□□□□ -2.21
Clhc1-204ENSMUST00000208530 Krtap22-2J3QNX6 67 aa1.25□□□□□ -2.21
Clhc1-204ENSMUST00000208530 Tnp1P10856 55 aa1.21□□□□□ -2.22
Clhc1-204ENSMUST00000208530 Mt4P47945 62 aa1.21□□□□□ -2.22
Clhc1-204ENSMUST00000208530 Syne1Q6ZWR6 8799 aa1.21□□□□□ -2.22
Clhc1-204ENSMUST00000208530 Sprr2kO70562 68 aa1.18□□□□□ -2.22
Clhc1-204ENSMUST00000208530 Sprr2gO70558 76 aa1.17□□□□□ -2.22
Clhc1-204ENSMUST00000208530 AhnakE9Q616 5656 aaKnown RBP1.12□□□□□ -2.23
Clhc1-204ENSMUST00000208530 Muc19Q6PZE0 7524 aa1.11□□□□□ -2.23
Clhc1-204ENSMUST00000208530 Lce3bQ9CQM7 98 aa1.09□□□□□ -2.24
Clhc1-204ENSMUST00000208530 ObscnA2AAJ9 8891 aaKnown RBP1.06□□□□□ -2.24
Clhc1-204ENSMUST00000208530 Sprr2dO70555 85 aa1.04□□□□□ -2.24
Clhc1-204ENSMUST00000208530 Sprr2iO70560 76 aa1.03□□□□□ -2.24
Clhc1-204ENSMUST00000208530 Mt1P02802 61 aaKnown RBP1□□□□□ -2.25
Clhc1-204ENSMUST00000208530 Krtap19-4Q925H7 84 aa1□□□□□ -2.25
Clhc1-204ENSMUST00000208530 Gm10024A0A0A0MQA4 119 aa0.99□□□□□ -2.25
Clhc1-204ENSMUST00000208530 Sprr2fO70557 76 aa0.93□□□□□ -2.26
Clhc1-204ENSMUST00000208530 Sprr2hO70559 108 aa0.93□□□□□ -2.26
Clhc1-204ENSMUST00000208530 Sprr2eO70556 76 aa0.84□□□□□ -2.28
Clhc1-204ENSMUST00000208530 Muc16A0A140LJ72 8478 aa0.82□□□□□ -2.28
Clhc1-204ENSMUST00000208530 Sprr2bO70554 98 aa0.58□□□□□ -2.32
Clhc1-204ENSMUST00000208530 Phgr1Q8K0G7 91 aa0.55□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 69.9 ms