RNA–Protein interactions for RNA: ENSMUST00000188894.6

Fn1-214, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 8,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-214ENSMUST00000188894 Krtap31-1Q9D644 177 aa3.52□□□□□ -1.85
Fn1-214ENSMUST00000188894 Dnah8Q91XQ0 4731 aa3.5□□□□□ -1.85
Fn1-214ENSMUST00000188894 Herc2Q4U2R1 4836 aa3.49□□□□□ -1.85
Fn1-214ENSMUST00000188894 Krtap6-3A0A087WQL6 57 aa3.48□□□□□ -1.85
Fn1-214ENSMUST00000188894 Gm11938Q9D3H4 131 aa3.45□□□□□ -1.86
Fn1-214ENSMUST00000188894 Fat2Q5F226 4351 aa3.44□□□□□ -1.86
Fn1-214ENSMUST00000188894 Fsip2A2ARZ3 6995 aa3.36□□□□□ -1.87
Fn1-214ENSMUST00000188894 Kiaa1109A2AAE1 5005 aa3.33□□□□□ -1.88
Fn1-214ENSMUST00000188894 Pkhd1l1Q80ZA4 4249 aa3.3□□□□□ -1.88
Fn1-214ENSMUST00000188894 Birc6O88738 4882 aa3.29□□□□□ -1.88
Fn1-214ENSMUST00000188894 Lrp2A2ARV4 4660 aa3.29□□□□□ -1.88
Fn1-214ENSMUST00000188894 Syne2Q6ZWQ0 6874 aaKnown RBP3.28□□□□□ -1.88
Fn1-214ENSMUST00000188894 Herc1E9PZP8 4859 aa3.26□□□□□ -1.89
Fn1-214ENSMUST00000188894 Krtap4-16Q91W93 202 aa3.24□□□□□ -1.89
Fn1-214ENSMUST00000188894 Kmt2cQ8BRH4 4903 aa3.22□□□□□ -1.89
Fn1-214ENSMUST00000188894 HydinQ80W93 5154 aa3.2□□□□□ -1.9
Fn1-214ENSMUST00000188894 Abca13Q5SSE9 5034 aa3.1□□□□□ -1.91
Fn1-214ENSMUST00000188894 Krtap20-2E9Q0A8 60 aa3.09□□□□□ -1.91
Fn1-214ENSMUST00000188894 PcloQ9QYX7 5068 aa3.08□□□□□ -1.92
Fn1-214ENSMUST00000188894 Gm11555B1AQ89 175 aa3.07□□□□□ -1.92
Fn1-214ENSMUST00000188894 Syne1Q6ZWR6 8799 aa3.07□□□□□ -1.92
Fn1-214ENSMUST00000188894 4932415D10RikA0A1W2P6U8 4986 aa3.06□□□□□ -1.92
Fn1-214ENSMUST00000188894 Muc5bE9Q5I3 4800 aa3□□□□□ -1.93
Fn1-214ENSMUST00000188894 ZanO88799 5376 aa2.89□□□□□ -1.95
Fn1-214ENSMUST00000188894 Ush2AQ2QI47 5193 aa2.89□□□□□ -1.95
Fn1-214ENSMUST00000188894 Mdn1A2ANY6 5589 aaKnown RBP2.89□□□□□ -1.95
Fn1-214ENSMUST00000188894 Fat4Q2PZL6 4981 aa2.88□□□□□ -1.95
Fn1-214ENSMUST00000188894 Mt1P02802 61 aaKnown RBP2.84□□□□□ -1.95
Fn1-214ENSMUST00000188894 Ubr4A2AN08 5180 aa2.83□□□□□ -1.96
Fn1-214ENSMUST00000188894 ObscnA2AAJ9 8891 aaKnown RBP2.71□□□□□ -1.98
Fn1-214ENSMUST00000188894 Hmcn2A2AJ76 5100 aa2.7□□□□□ -1.98
Fn1-214ENSMUST00000188894 Rnf213E9Q555 5152 aaKnown RBP2.66□□□□□ -1.98
Fn1-214ENSMUST00000188894 Eppk1Q8R0W0 6548 aa2.66□□□□□ -1.98
Fn1-214ENSMUST00000188894 SspoQ8CG65 4998 aa2.56□□□□□ -2
Fn1-214ENSMUST00000188894 NebE9Q1W3 7152 aa2.49□□□□□ -2.01
Fn1-214ENSMUST00000188894 Phgr1Q8K0G7 91 aa2.43□□□□□ -2.02
Fn1-214ENSMUST00000188894 Muc16A0A140LJ72 8478 aa2.38□□□□□ -2.03
Fn1-214ENSMUST00000188894 Gm10229O08631 77 aa2.37□□□□□ -2.03
Fn1-214ENSMUST00000188894 DstQ91ZU6 7393 aaKnown RBP2.35□□□□□ -2.03
Fn1-214ENSMUST00000188894 1110025L11RikO09048 78 aa2.34□□□□□ -2.04
Fn1-214ENSMUST00000188894 Krtap6-5Q925H3 78 aa2.34□□□□□ -2.04
Fn1-214ENSMUST00000188894 Gm11559Q9D3H7 191 aa2.32□□□□□ -2.04
Fn1-214ENSMUST00000188894 Macf1Q9QXZ0 7354 aaKnown RBP2.25□□□□□ -2.05
Fn1-214ENSMUST00000188894 Gm11568A2A4M2 211 aa2.03□□□□□ -2.08
Fn1-214ENSMUST00000188894 Krtap9-1Q64526 186 aa2.03□□□□□ -2.08
Fn1-214ENSMUST00000188894 Kmt2dQ6PDK2 5588 aa2.01□□□□□ -2.09
Fn1-214ENSMUST00000188894 Muc19Q6PZE0 7524 aa1.95□□□□□ -2.1
Fn1-214ENSMUST00000188894 Krtap6-2O08884 159 aa1.84□□□□□ -2.11
Fn1-214ENSMUST00000188894 Gm11567Q9D141 195 aa1.82□□□□□ -2.12
Fn1-214ENSMUST00000188894 Krtap5-2Q9D5Z7 189 aa1.79□□□□□ -2.12
Fn1-214ENSMUST00000188894 Gm2431E9Q8S1 172 aa1.73□□□□□ -2.13
Fn1-214ENSMUST00000188894 Gm4553A0A1B0GSA9 284 aa1.7□□□□□ -2.14
Fn1-214ENSMUST00000188894 Gpr98Q8VHN7 6298 aaKnown RBP1.69□□□□□ -2.14
Fn1-214ENSMUST00000188894 Gm11639A0A1D5RLM8 5808 aa1.67□□□□□ -2.14
Fn1-214ENSMUST00000188894 A030005L19RikA0A1Y7VIU2 113 aa1.63□□□□□ -2.15
Fn1-214ENSMUST00000188894 Hmcn1D3YXG0 5634 aa1.57□□□□□ -2.16
Fn1-214ENSMUST00000188894 Gm10153A0A1B0GRL1 320 aa1.53□□□□□ -2.16
Fn1-214ENSMUST00000188894 Gm45337A0A1B0GS71 263 aa1.51□□□□□ -2.17
Fn1-214ENSMUST00000188894 Krtap21-1Q925H4 128 aa1.51□□□□□ -2.17
Fn1-214ENSMUST00000188894 A0A1Y7VJH8 109 aa1.48□□□□□ -2.17
Fn1-214ENSMUST00000188894 Gm40460A0A1B0GR10 244 aa1.46□□□□□ -2.18
Fn1-214ENSMUST00000188894 Gm7579A0A1B0GRJ4 243 aa1.46□□□□□ -2.18
Fn1-214ENSMUST00000188894 Krtap5-5Q2TA51 241 aa1.46□□□□□ -2.18
Fn1-214ENSMUST00000188894 Krtap5-4Q62220 223 aa1.46□□□□□ -2.18
Fn1-214ENSMUST00000188894 AhnakE9Q616 5656 aaKnown RBP1.45□□□□□ -2.18
Fn1-214ENSMUST00000188894 Gm39115A0A1B0GSH7 232 aa1.42□□□□□ -2.18
Fn1-214ENSMUST00000188894 Gm45618A0A1B0GSA0 219 aa1.25□□□□□ -2.21
Fn1-214ENSMUST00000188894 A0A1Y7VLE6 161 aa1.14□□□□□ -2.23
Fn1-214ENSMUST00000188894 Krtap5-1Q64507 230 aa1.12□□□□□ -2.23
Fn1-214ENSMUST00000188894 A030003K21RikA0A1Y7VIM3 128 aa1.09□□□□□ -2.23
Fn1-214ENSMUST00000188894 Gm29735A0A1B0GT06 219 aa1.08□□□□□ -2.24
Fn1-214ENSMUST00000188894 Gm6217A0A1Y7VJK9 128 aa1.01□□□□□ -2.25
Fn1-214ENSMUST00000188894 A0A1Y7VJ07 166 aa0.96□□□□□ -2.26
Fn1-214ENSMUST00000188894 A030005K14RikA0A1Y7VNY1 122 aa0.94□□□□□ -2.26
Fn1-214ENSMUST00000188894 Krtap28-10A0A1Y7VP58 119 aa0.92□□□□□ -2.26
Fn1-214ENSMUST00000188894 Gm7544A0A1Y7VJ58 118 aa0.86□□□□□ -2.27
Fn1-214ENSMUST00000188894 Krtap28-13A0A087WQP5 138 aa0.86□□□□□ -2.27
Fn1-214ENSMUST00000188894 A0A286YCP9 139 aa0.84□□□□□ -2.28
Fn1-214ENSMUST00000188894 A030014E15RikA0A1Y7VJV2 120 aa0.82□□□□□ -2.28
Fn1-214ENSMUST00000188894 Gm4559A4IF42 199 aa0.61□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 556 ms