RNA–Protein interactions for RNA: ENSMUST00000118415.1

Hmgb1-ps3-201, mousemouse

BASIC

Gene Hmgb1-ps3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps3-201ENSMUST00000118415 Herc1E9PZP8 4859 aa1.71□□□□□ -2.14
Hmgb1-ps3-201ENSMUST00000118415 Gm9955Q8CEJ8 102 aa1.68□□□□□ -2.14
Hmgb1-ps3-201ENSMUST00000118415 Hmcn2A2AJ76 5100 aa1.66□□□□□ -2.14
Hmgb1-ps3-201ENSMUST00000118415 BC029722A0A0N4SW31 51 aa1.64□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Gm20537G3UYK7 97 aa1.64□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Gm10382Q3V0T5 144 aa1.64□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Gm4553A0A1B0GSA9 284 aa1.63□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 4932415D10RikA0A1W2P6U8 4986 aa1.63□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Krtap13-1Q8K198 168 aa1.62□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Ush2AQ2QI47 5193 aa1.62□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Gm17402F6Z0L5 76 aa1.6□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Gm19426M0QWC7 77 aa1.59□□□□□ -2.15
Hmgb1-ps3-201ENSMUST00000118415 Ubr4A2AN08 5180 aa1.59□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Rnf213E9Q555 5152 aaKnown RBP1.59□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 CriptO70333 101 aa1.58□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Prm1P02319 51 aa1.58□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Fat4Q2PZL6 4981 aa1.57□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Gm10024A0A0A0MQA4 119 aa1.57□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 ZanO88799 5376 aa1.56□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Gm3880A0A1B0GSB3 72 aa1.56□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Gm9789Q8BIG3 52 aa1.56□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Krtap19-1Q925H2 87 aa1.56□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Gm7735D3YX18 52 aa1.54□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 Spink7Q6IE32 76 aa1.54□□□□□ -2.16
Hmgb1-ps3-201ENSMUST00000118415 SspoQ8CG65 4998 aa1.52□□□□□ -2.17
Hmgb1-ps3-201ENSMUST00000118415 Lce3eF8VQJ0 98 aa1.51□□□□□ -2.17
Hmgb1-ps3-201ENSMUST00000118415 Sprr2a3Q4KL71 83 aa1.51□□□□□ -2.17
Hmgb1-ps3-201ENSMUST00000118415 Sprr2a1Q9CQK8 83 aa1.51□□□□□ -2.17
Hmgb1-ps3-201ENSMUST00000118415 Krtap19-9aF8WH65 55 aa1.46□□□□□ -2.18
Hmgb1-ps3-201ENSMUST00000118415 Krtap6-5Q925H3 78 aa1.45□□□□□ -2.18
Hmgb1-ps3-201ENSMUST00000118415 Krtap19-2Q925I0 141 aa1.45□□□□□ -2.18
Hmgb1-ps3-201ENSMUST00000118415 Gm11564A2A4L9 201 aa1.44□□□□□ -2.18
Hmgb1-ps3-201ENSMUST00000118415 Muc5bE9Q5I3 4800 aa1.41□□□□□ -2.18
Hmgb1-ps3-201ENSMUST00000118415 Gm10061D3Z714 54 aa1.39□□□□□ -2.19
Hmgb1-ps3-201ENSMUST00000118415 Kmt2dQ6PDK2 5588 aa1.39□□□□□ -2.19
Hmgb1-ps3-201ENSMUST00000118415 Krtap8-1O08633 61 aa1.35□□□□□ -2.19
Hmgb1-ps3-201ENSMUST00000118415 Tnp1P10856 55 aa1.35□□□□□ -2.19
Hmgb1-ps3-201ENSMUST00000118415 Krtap19-9bQ99NG9 58 aa1.35□□□□□ -2.19
Hmgb1-ps3-201ENSMUST00000118415 Gm6358A0A087WPH4 74 aa1.31□□□□□ -2.2
Hmgb1-ps3-201ENSMUST00000118415 Mdn1A2ANY6 5589 aaKnown RBP1.3□□□□□ -2.2
Hmgb1-ps3-201ENSMUST00000118415 Krtap17-1A2A5X6 109 aa1.29□□□□□ -2.2
Hmgb1-ps3-201ENSMUST00000118415 Mt2P02798 61 aa1.29□□□□□ -2.2
Hmgb1-ps3-201ENSMUST00000118415 2310046K23RikA0A0A6YVW6 87 aa1.25□□□□□ -2.21
Hmgb1-ps3-201ENSMUST00000118415 Krtap22-2J3QNX6 67 aa1.24□□□□□ -2.21
Hmgb1-ps3-201ENSMUST00000118415 Krtap6-2O08884 159 aa1.22□□□□□ -2.21
Hmgb1-ps3-201ENSMUST00000118415 Krtap21-1Q925H4 128 aa1.21□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 1110025L11RikO09048 78 aa1.2□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 Krtap4-16Q91W93 202 aa1.2□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 Syne2Q6ZWQ0 6874 aaKnown RBP1.19□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 Krtap5-5Q2TA51 241 aa1.17□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 Gm40460A0A1B0GR10 244 aa1.16□□□□□ -2.22
Hmgb1-ps3-201ENSMUST00000118415 Sprr2gO70558 76 aa1.12□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Gm11938Q9D3H4 131 aa1.12□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Sprr2dO70555 85 aa1.11□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Mt4P47945 62 aa1.1□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Lce3bQ9CQM7 98 aa1.1□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Fsip2A2ARZ3 6995 aa1.1□□□□□ -2.23
Hmgb1-ps3-201ENSMUST00000118415 Sprr2kO70562 68 aa1.08□□□□□ -2.24
Hmgb1-ps3-201ENSMUST00000118415 Krtap19-4Q925H7 84 aa1.08□□□□□ -2.24
Hmgb1-ps3-201ENSMUST00000118415 Syne1Q6ZWR6 8799 aa1.06□□□□□ -2.24
Hmgb1-ps3-201ENSMUST00000118415 Krtap6-3A0A087WQL6 57 aa1.04□□□□□ -2.24
Hmgb1-ps3-201ENSMUST00000118415 Sprr2iO70560 76 aa1.03□□□□□ -2.24
Hmgb1-ps3-201ENSMUST00000118415 Hmcn1D3YXG0 5634 aa1.03□□□□□ -2.25
Hmgb1-ps3-201ENSMUST00000118415 Mt1P02802 61 aaKnown RBP0.99□□□□□ -2.25
Hmgb1-ps3-201ENSMUST00000118415 Krtap20-2E9Q0A8 60 aa0.96□□□□□ -2.26
Hmgb1-ps3-201ENSMUST00000118415 ObscnA2AAJ9 8891 aaKnown RBP0.95□□□□□ -2.26
Hmgb1-ps3-201ENSMUST00000118415 Sprr2hO70559 108 aa0.95□□□□□ -2.26
Hmgb1-ps3-201ENSMUST00000118415 Sprr2eO70556 76 aa0.93□□□□□ -2.26
Hmgb1-ps3-201ENSMUST00000118415 Macf1Q9QXZ0 7354 aaKnown RBP0.88□□□□□ -2.27
Hmgb1-ps3-201ENSMUST00000118415 Eppk1Q8R0W0 6548 aa0.87□□□□□ -2.27
Hmgb1-ps3-201ENSMUST00000118415 Sprr2fO70557 76 aa0.86□□□□□ -2.27
Hmgb1-ps3-201ENSMUST00000118415 Gm11639A0A1D5RLM8 5808 aa0.84□□□□□ -2.28
Hmgb1-ps3-201ENSMUST00000118415 AhnakE9Q616 5656 aaKnown RBP0.81□□□□□ -2.28
Hmgb1-ps3-201ENSMUST00000118415 DstQ91ZU6 7393 aaKnown RBP0.79□□□□□ -2.28
Hmgb1-ps3-201ENSMUST00000118415 Gpr98Q8VHN7 6298 aaKnown RBP0.76□□□□□ -2.29
Hmgb1-ps3-201ENSMUST00000118415 Muc19Q6PZE0 7524 aa0.73□□□□□ -2.29
Hmgb1-ps3-201ENSMUST00000118415 Sprr2bO70554 98 aa0.72□□□□□ -2.29
Hmgb1-ps3-201ENSMUST00000118415 NebE9Q1W3 7152 aa0.72□□□□□ -2.29
Hmgb1-ps3-201ENSMUST00000118415 Muc16A0A140LJ72 8478 aa0.66□□□□□ -2.3
Hmgb1-ps3-201ENSMUST00000118415 Phgr1Q8K0G7 91 aa0.57□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 99.8 ms