RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 2300003K06RikA2A4M0 262 aa2.53□□□□□ -2
Polr1a-201ENSMUST00000055296 Krtap4-9B1AQA9 244 aa2.51□□□□□ -2.01
Polr1a-201ENSMUST00000055296 Ryr3A2AGL3 4863 aa2.49□□□□□ -2.01
Polr1a-201ENSMUST00000055296 Krtap4-13Q9D7P3 165 aa2.46□□□□□ -2.01
Polr1a-201ENSMUST00000055296 Krtap17-1A2A5X6 109 aa2.46□□□□□ -2.02
Polr1a-201ENSMUST00000055296 Gm11938Q9D3H4 131 aa2.46□□□□□ -2.02
Polr1a-201ENSMUST00000055296 ZanO88799 5376 aa2.45□□□□□ -2.02
Polr1a-201ENSMUST00000055296 Herc2Q4U2R1 4836 aa2.44□□□□□ -2.02
Polr1a-201ENSMUST00000055296 Kmt2cQ8BRH4 4903 aa2.43□□□□□ -2.02
Polr1a-201ENSMUST00000055296 Krtap6-3A0A087WQL6 57 aa2.38□□□□□ -2.03
Polr1a-201ENSMUST00000055296 PcloQ9QYX7 5068 aa2.35□□□□□ -2.03
Polr1a-201ENSMUST00000055296 Herc1E9PZP8 4859 aa2.27□□□□□ -2.05
Polr1a-201ENSMUST00000055296 Muc5bE9Q5I3 4800 aa2.24□□□□□ -2.05
Polr1a-201ENSMUST00000055296 Gm11554B1AQB2 190 aa2.23□□□□□ -2.05
Polr1a-201ENSMUST00000055296 Mt1P02802 61 aaKnown RBP2.22□□□□□ -2.05
Polr1a-201ENSMUST00000055296 Birc6O88738 4882 aa2.21□□□□□ -2.06
Polr1a-201ENSMUST00000055296 Kiaa1109A2AAE1 5005 aa2.18□□□□□ -2.06
Polr1a-201ENSMUST00000055296 Syne2Q6ZWQ0 6874 aaKnown RBP2.17□□□□□ -2.06
Polr1a-201ENSMUST00000055296 Syne1Q6ZWR6 8799 aa2.14□□□□□ -2.07
Polr1a-201ENSMUST00000055296 HydinQ80W93 5154 aa2.14□□□□□ -2.07
Polr1a-201ENSMUST00000055296 Abca13Q5SSE9 5034 aa2.12□□□□□ -2.07
Polr1a-201ENSMUST00000055296 Krtap20-2E9Q0A8 60 aa2.11□□□□□ -2.07
Polr1a-201ENSMUST00000055296 4932415D10RikA0A1W2P6U8 4986 aa2.09□□□□□ -2.07
Polr1a-201ENSMUST00000055296 Fsip2A2ARZ3 6995 aa2.03□□□□□ -2.08
Polr1a-201ENSMUST00000055296 Hmcn2A2AJ76 5100 aa2.01□□□□□ -2.09
Polr1a-201ENSMUST00000055296 Fat4Q2PZL6 4981 aa1.98□□□□□ -2.09
Polr1a-201ENSMUST00000055296 ObscnA2AAJ9 8891 aaKnown RBP1.96□□□□□ -2.1
Polr1a-201ENSMUST00000055296 Ubr4A2AN08 5180 aa1.96□□□□□ -2.1
Polr1a-201ENSMUST00000055296 Gm11555B1AQ89 175 aa1.95□□□□□ -2.1
Polr1a-201ENSMUST00000055296 Ush2AQ2QI47 5193 aa1.94□□□□□ -2.1
Polr1a-201ENSMUST00000055296 Mdn1A2ANY6 5589 aaKnown RBP1.91□□□□□ -2.1
Polr1a-201ENSMUST00000055296 Rnf213E9Q555 5152 aaKnown RBP1.87□□□□□ -2.11
Polr1a-201ENSMUST00000055296 SspoQ8CG65 4998 aa1.86□□□□□ -2.11
Polr1a-201ENSMUST00000055296 Phgr1Q8K0G7 91 aa1.76□□□□□ -2.13
Polr1a-201ENSMUST00000055296 Gm10229O08631 77 aa1.75□□□□□ -2.13
Polr1a-201ENSMUST00000055296 Gm11559Q9D3H7 191 aa1.75□□□□□ -2.13
Polr1a-201ENSMUST00000055296 1110025L11RikO09048 78 aa1.74□□□□□ -2.13
Polr1a-201ENSMUST00000055296 Krtap6-5Q925H3 78 aa1.74□□□□□ -2.13
Polr1a-201ENSMUST00000055296 Eppk1Q8R0W0 6548 aa1.69□□□□□ -2.14
Polr1a-201ENSMUST00000055296 Gm11568A2A4M2 211 aa1.68□□□□□ -2.14
Polr1a-201ENSMUST00000055296 Krtap9-1Q64526 186 aa1.68□□□□□ -2.14
Polr1a-201ENSMUST00000055296 Gm11567Q9D141 195 aa1.59□□□□□ -2.15
Polr1a-201ENSMUST00000055296 Kmt2dQ6PDK2 5588 aa1.59□□□□□ -2.16
Polr1a-201ENSMUST00000055296 Muc16A0A140LJ72 8478 aa1.57□□□□□ -2.16
Polr1a-201ENSMUST00000055296 NebE9Q1W3 7152 aa1.5□□□□□ -2.17
Polr1a-201ENSMUST00000055296 Krtap5-2Q9D5Z7 189 aa1.49□□□□□ -2.17
Polr1a-201ENSMUST00000055296 Macf1Q9QXZ0 7354 aaKnown RBP1.47□□□□□ -2.17
Polr1a-201ENSMUST00000055296 DstQ91ZU6 7393 aaKnown RBP1.42□□□□□ -2.18
Polr1a-201ENSMUST00000055296 Gm4553A0A1B0GSA9 284 aa1.4□□□□□ -2.19
Polr1a-201ENSMUST00000055296 Muc19Q6PZE0 7524 aa1.38□□□□□ -2.19
Polr1a-201ENSMUST00000055296 A030005L19RikA0A1Y7VIU2 113 aa1.36□□□□□ -2.19
Polr1a-201ENSMUST00000055296 Krtap6-2O08884 159 aa1.34□□□□□ -2.2
Polr1a-201ENSMUST00000055296 Gpr98Q8VHN7 6298 aaKnown RBP1.33□□□□□ -2.2
Polr1a-201ENSMUST00000055296 Gm11639A0A1D5RLM8 5808 aa1.33□□□□□ -2.2
Polr1a-201ENSMUST00000055296 Gm2431E9Q8S1 172 aa1.31□□□□□ -2.2
Polr1a-201ENSMUST00000055296 Gm10153A0A1B0GRL1 320 aa1.22□□□□□ -2.21
Polr1a-201ENSMUST00000055296 Hmcn1D3YXG0 5634 aa1.2□□□□□ -2.22
Polr1a-201ENSMUST00000055296 Gm45337A0A1B0GS71 263 aa1.19□□□□□ -2.22
Polr1a-201ENSMUST00000055296 Gm39115A0A1B0GSH7 232 aa1.18□□□□□ -2.22
Polr1a-201ENSMUST00000055296 Krtap21-1Q925H4 128 aa1.18□□□□□ -2.22
Polr1a-201ENSMUST00000055296 Gm40460A0A1B0GR10 244 aa1.13□□□□□ -2.23
Polr1a-201ENSMUST00000055296 Gm7579A0A1B0GRJ4 243 aa1.13□□□□□ -2.23
Polr1a-201ENSMUST00000055296 Krtap5-5Q2TA51 241 aa1.13□□□□□ -2.23
Polr1a-201ENSMUST00000055296 Krtap5-4Q62220 223 aa1.13□□□□□ -2.23
Polr1a-201ENSMUST00000055296 Gm45618A0A1B0GSA0 219 aa0.99□□□□□ -2.25
Polr1a-201ENSMUST00000055296 AhnakE9Q616 5656 aaKnown RBP0.98□□□□□ -2.25
Polr1a-201ENSMUST00000055296 A0A1Y7VJH8 109 aa0.93□□□□□ -2.26
Polr1a-201ENSMUST00000055296 A0A1Y7VLE6 161 aa0.92□□□□□ -2.26
Polr1a-201ENSMUST00000055296 Gm29735A0A1B0GT06 219 aa0.87□□□□□ -2.27
Polr1a-201ENSMUST00000055296 A0A286YCP9 139 aa0.83□□□□□ -2.28
Polr1a-201ENSMUST00000055296 Krtap5-1Q64507 230 aa0.83□□□□□ -2.28
Polr1a-201ENSMUST00000055296 A0A1Y7VJ07 166 aa0.8□□□□□ -2.28
Polr1a-201ENSMUST00000055296 Krtap28-13A0A087WQP5 138 aa0.75□□□□□ -2.29
Polr1a-201ENSMUST00000055296 A030014E15RikA0A1Y7VJV2 120 aa0.64□□□□□ -2.31
Polr1a-201ENSMUST00000055296 Krtap28-10A0A1Y7VP58 119 aa0.55□□□□□ -2.32
Polr1a-201ENSMUST00000055296 A030005K14RikA0A1Y7VNY1 122 aa0.55□□□□□ -2.32
Polr1a-201ENSMUST00000055296 Gm4559A4IF42 199 aa0.49□□□□□ -2.33
Polr1a-201ENSMUST00000055296 A030003K21RikA0A1Y7VIM3 128 aa0.46□□□□□ -2.34
Polr1a-201ENSMUST00000055296 Gm7544A0A1Y7VJ58 118 aa0.45□□□□□ -2.34
Polr1a-201ENSMUST00000055296 Gm6217A0A1Y7VJK9 128 aa0.39□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 117.7 ms