RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Sox16Q62247 57 aa5.92□□□□□ -1.46
Sf3b6-201ENSMUST00000046207 Ndufb1P0DN34 57 aa5.91□□□□□ -1.46
Sf3b6-201ENSMUST00000046207 Gm11554B1AQB2 190 aa5.9□□□□□ -1.46
Sf3b6-201ENSMUST00000046207 Gm10337F7DEP7 55 aa5.89□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 Uqcr11Q9CPX8 56 aa5.88□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 H2al1bA0A087WP11 105 aa5.87□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 Gpr98Q8VHN7 6298 aaKnown RBP5.86□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 H2al1kJ3QP08 105 aa5.85□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 H2al1mQ9DAD9 105 aa5.85□□□□□ -1.47
Sf3b6-201ENSMUST00000046207 Gm4553A0A1B0GSA9 284 aa5.83□□□□□ -1.48
Sf3b6-201ENSMUST00000046207 Sprr2iO70560 76 aa5.81□□□□□ -1.48
Sf3b6-201ENSMUST00000046207 Gm17402F6Z0L5 76 aa5.8□□□□□ -1.48
Sf3b6-201ENSMUST00000046207 Krtap19-9bQ99NG9 58 aa5.79□□□□□ -1.48
Sf3b6-201ENSMUST00000046207 Lce1cQ9D1C5 147 aa5.74□□□□□ -1.49
Sf3b6-201ENSMUST00000046207 4933415A04RikQ9D443 101 aa5.74□□□□□ -1.49
Sf3b6-201ENSMUST00000046207 Muc19Q6PZE0 7524 aa5.72□□□□□ -1.49
Sf3b6-201ENSMUST00000046207 Gm11568A2A4M2 211 aa5.71□□□□□ -1.5
Sf3b6-201ENSMUST00000046207 Krtap9-1Q64526 186 aa5.71□□□□□ -1.5
Sf3b6-201ENSMUST00000046207 Syne1Q6ZWR6 8799 aa5.69□□□□□ -1.5
Sf3b6-201ENSMUST00000046207 Lce1fB9EJP6 147 aa5.69□□□□□ -1.5
Sf3b6-201ENSMUST00000046207 Gm2431E9Q8S1 172 aa5.65□□□□□ -1.5
Sf3b6-201ENSMUST00000046207 Sec61gP60060 68 aa5.64□□□□□ -1.51
Sf3b6-201ENSMUST00000046207 Gm45337A0A1B0GS71 263 aa5.53□□□□□ -1.52
Sf3b6-201ENSMUST00000046207 Gm9955Q8CEJ8 102 aa5.5□□□□□ -1.53
Sf3b6-201ENSMUST00000046207 Gm11567Q9D141 195 aa5.49□□□□□ -1.53
Sf3b6-201ENSMUST00000046207 Gm3646F6S692 53 aa5.48□□□□□ -1.53
Sf3b6-201ENSMUST00000046207 Lce3bQ9CQM7 98 aa5.47□□□□□ -1.53
Sf3b6-201ENSMUST00000046207 Hmcn1D3YXG0 5634 aa5.45□□□□□ -1.54
Sf3b6-201ENSMUST00000046207 Ndufs5Q99LY9 106 aa5.42□□□□□ -1.54
Sf3b6-201ENSMUST00000046207 Camk2n1Q6QWF9 78 aa5.39□□□□□ -1.55
Sf3b6-201ENSMUST00000046207 Gm45618A0A1B0GSA0 219 aa5.37□□□□□ -1.55
Sf3b6-201ENSMUST00000046207 Gm39115A0A1B0GSH7 232 aa5.37□□□□□ -1.55
Sf3b6-201ENSMUST00000046207 DstQ91ZU6 7393 aaKnown RBP5.33□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Gm40460A0A1B0GR10 244 aa5.32□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Gm7579A0A1B0GRJ4 243 aa5.32□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Krtap5-5Q2TA51 241 aa5.32□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Krtap5-4Q62220 223 aa5.32□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Gm10153A0A1B0GRL1 320 aa5.3□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 NebE9Q1W3 7152 aa5.29□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Gm10272F7CZ33 110 aa5.28□□□□□ -1.56
Sf3b6-201ENSMUST00000046207 Gm29735A0A1B0GT06 219 aa5.24□□□□□ -1.57
Sf3b6-201ENSMUST00000046207 Krtap19-4Q925H7 84 aa5.22□□□□□ -1.57
Sf3b6-201ENSMUST00000046207 Gm3880A0A1B0GSB3 72 aa5.18□□□□□ -1.58
Sf3b6-201ENSMUST00000046207 Krtap4-16Q91W93 202 aa5.14□□□□□ -1.59
Sf3b6-201ENSMUST00000046207 Krtap7-1Q9D3I6 87 aa5.14□□□□□ -1.59
Sf3b6-201ENSMUST00000046207 Gm11938Q9D3H4 131 aa5.11□□□□□ -1.59
Sf3b6-201ENSMUST00000046207 Mt1P02802 61 aaKnown RBP5.1□□□□□ -1.59
Sf3b6-201ENSMUST00000046207 Gm12216A0A1W2P827 62 aa5.09□□□□□ -1.59
Sf3b6-201ENSMUST00000046207 Romo1P60603 79 aa5.03□□□□□ -1.6
Sf3b6-201ENSMUST00000046207 AhnakE9Q616 5656 aaKnown RBP5□□□□□ -1.61
Sf3b6-201ENSMUST00000046207 Gm10142J3KMP7 120 aa4.95□□□□□ -1.62
Sf3b6-201ENSMUST00000046207 Sprr2fO70557 76 aa4.9□□□□□ -1.63
Sf3b6-201ENSMUST00000046207 Lce3cQ91V05 98 aa4.77□□□□□ -1.65
Sf3b6-201ENSMUST00000046207 Mt3P28184 68 aa4.75□□□□□ -1.65
Sf3b6-201ENSMUST00000046207 Lce3dE9Q8V1 98 aa4.69□□□□□ -1.66
Sf3b6-201ENSMUST00000046207 ObscnA2AAJ9 8891 aaKnown RBP4.66□□□□□ -1.66
Sf3b6-201ENSMUST00000046207 Gm40193A0A1B0GT39 78 aa4.65□□□□□ -1.67
Sf3b6-201ENSMUST00000046207 Mp68P56379 58 aa4.53□□□□□ -1.68
Sf3b6-201ENSMUST00000046207 Lce3eF8VQJ0 98 aa4.48□□□□□ -1.69
Sf3b6-201ENSMUST00000046207 Lce3fQ6PAI4 98 aa4.48□□□□□ -1.69
Sf3b6-201ENSMUST00000046207 Tnp1P10856 55 aa4.36□□□□□ -1.71
Sf3b6-201ENSMUST00000046207 4933428G20RikQ9D3X4 101 aa4.28□□□□□ -1.72
Sf3b6-201ENSMUST00000046207 Lce3aQ497I5 98 aa4.27□□□□□ -1.73
Sf3b6-201ENSMUST00000046207 Gm20538F6Z9R1 75 aa4.24□□□□□ -1.73
Sf3b6-201ENSMUST00000046207 Sprr2eO70556 76 aa4.14□□□□□ -1.75
Sf3b6-201ENSMUST00000046207 Ndufaf8A2AMZ4 74 aa4.02□□□□□ -1.77
Sf3b6-201ENSMUST00000046207 Gm10024A0A0A0MQA4 119 aa4.01□□□□□ -1.77
Sf3b6-201ENSMUST00000046207 Sprr2dO70555 85 aa3.96□□□□□ -1.78
Sf3b6-201ENSMUST00000046207 Muc16A0A140LJ72 8478 aa3.95□□□□□ -1.78
Sf3b6-201ENSMUST00000046207 Sprr2hO70559 108 aa3.93□□□□□ -1.78
Sf3b6-201ENSMUST00000046207 Krtap5-1Q64507 230 aa3.68□□□□□ -1.82
Sf3b6-201ENSMUST00000046207 1110025L11RikO09048 78 aa3.56□□□□□ -1.84
Sf3b6-201ENSMUST00000046207 Krtap6-5Q925H3 78 aa3.56□□□□□ -1.84
Sf3b6-201ENSMUST00000046207 Gm9112A2AI92 75 aa3.52□□□□□ -1.85
Sf3b6-201ENSMUST00000046207 Gm4559A4IF42 199 aa3.5□□□□□ -1.85
Sf3b6-201ENSMUST00000046207 Gm10229O08631 77 aa3.21□□□□□ -1.9
Sf3b6-201ENSMUST00000046207 Sprr2bO70554 98 aa3.03□□□□□ -1.92
Sf3b6-201ENSMUST00000046207 Krtap6-2O08884 159 aa2.93□□□□□ -1.94
Sf3b6-201ENSMUST00000046207 Krtap21-1Q925H4 128 aa2.86□□□□□ -1.95
Sf3b6-201ENSMUST00000046207 Phgr1Q8K0G7 91 aa2.3□□□□□ -2.04
Retrieved 80 of 22,080 RNA–protein pairs in 64 ms