RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Vps13bQ80TY5 3993 aa5.58□□□□□ -1.52
Col7a1-202ENSMUST00000112070 Huwe1Q7TMY8 4377 aaKnown RBP5.53□□□□□ -1.52
Col7a1-202ENSMUST00000112070 Gm10100J3QK64 120 aa5.45□□□□□ -1.54
Col7a1-202ENSMUST00000112070 Lce3bQ9CQM7 98 aa5.41□□□□□ -1.54
Col7a1-202ENSMUST00000112070 Lce3cQ91V05 98 aa5.34□□□□□ -1.55
Col7a1-202ENSMUST00000112070 Dnah6E9Q0B6 4144 aa5.34□□□□□ -1.55
Col7a1-202ENSMUST00000112070 2310046K23RikA0A0A6YVW6 87 aa5.34□□□□□ -1.56
Col7a1-202ENSMUST00000112070 Gm10142J3KMP7 120 aa5.34□□□□□ -1.56
Col7a1-202ENSMUST00000112070 TnxbO35452 4006 aa5.33□□□□□ -1.56
Col7a1-202ENSMUST00000112070 Gm10272F7CZ33 110 aa5.32□□□□□ -1.56
Col7a1-202ENSMUST00000112070 PrkdcP97313 4128 aa5.31□□□□□ -1.56
Col7a1-202ENSMUST00000112070 Dnah10D3YYQ8 4591 aa5.28□□□□□ -1.56
Col7a1-202ENSMUST00000112070 Kmt2aP55200 3966 aa5.28□□□□□ -1.56
Col7a1-202ENSMUST00000112070 Fras1Q80T14 4010 aa5.27□□□□□ -1.57
Col7a1-202ENSMUST00000112070 Lce3dE9Q8V1 98 aa5.22□□□□□ -1.57
Col7a1-202ENSMUST00000112070 Lce3eF8VQJ0 98 aa5.22□□□□□ -1.57
Col7a1-202ENSMUST00000112070 Lce3fQ6PAI4 98 aa5.22□□□□□ -1.57
Col7a1-202ENSMUST00000112070 Dnah14A0A140LIJ4 4489 aa5.21□□□□□ -1.58
Col7a1-202ENSMUST00000112070 LorP18165 486 aa5.19□□□□□ -1.58
Col7a1-202ENSMUST00000112070 Dnah1E9Q8T7 4250 aa5.13□□□□□ -1.59
Col7a1-202ENSMUST00000112070 Lce3aQ497I5 98 aa5.1□□□□□ -1.59
Col7a1-202ENSMUST00000112070 Vps13dB1ART2 4390 aa5.01□□□□□ -1.61
Col7a1-202ENSMUST00000112070 Krtap31-2Q8CAY5 177 aa4.99□□□□□ -1.61
Col7a1-202ENSMUST00000112070 Gm10024A0A0A0MQA4 119 aa4.98□□□□□ -1.61
Col7a1-202ENSMUST00000112070 Sprr2iO70560 76 aa4.98□□□□□ -1.61
Col7a1-202ENSMUST00000112070 Krtap31-1Q9D644 177 aa4.91□□□□□ -1.62
Col7a1-202ENSMUST00000112070 Dync2h1Q45VK7 4306 aa4.88□□□□□ -1.63
Col7a1-202ENSMUST00000112070 Pkhd1E9PZ36 4059 aa4.87□□□□□ -1.63
Col7a1-202ENSMUST00000112070 Krtap16-3Q8C1I6 86 aa4.87□□□□□ -1.63
Col7a1-202ENSMUST00000112070 Sprr2fO70557 76 aa4.84□□□□□ -1.63
Col7a1-202ENSMUST00000112070 Krtap22-2J3QNX6 67 aa4.81□□□□□ -1.64
Col7a1-202ENSMUST00000112070 Hectd4E9Q2E4 4418 aa4.8□□□□□ -1.64
Col7a1-202ENSMUST00000112070 Krtap19-4Q925H7 84 aa4.78□□□□□ -1.64
Col7a1-202ENSMUST00000112070 Krtap9-5A2A5X3 358 aa4.78□□□□□ -1.64
Col7a1-202ENSMUST00000112070 Dnah5Q8VHE6 4621 aa4.76□□□□□ -1.65
Col7a1-202ENSMUST00000112070 Mt2P02798 61 aa4.75□□□□□ -1.65
Col7a1-202ENSMUST00000112070 Lce1mQ9CR91 182 aa4.73□□□□□ -1.65
Col7a1-202ENSMUST00000112070 Sprr2eO70556 76 aa4.72□□□□□ -1.65
Col7a1-202ENSMUST00000112070 Lrp1Q91ZX7 4545 aaKnown RBP4.7□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Krtap19-3Q925H6 87 aa4.69□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Dnah2P0C6F1 4456 aa4.68□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Lce1jD3YUU5 139 aa4.68□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Lce1gQ9D195 139 aa4.68□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Lce1iQ9D6P5 149 aa4.68□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Lce1hQ9D6R3 140 aa4.68□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Krtap19-2Q925I0 141 aa4.67□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Krtap9-3Q3V2C1 136 aa4.66□□□□□ -1.66
Col7a1-202ENSMUST00000112070 Lce1bQ9D149 137 aa4.63□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Lce1fB9EJP6 147 aa4.61□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Lce1cQ9D1C5 147 aa4.61□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Lce1lQ9D1G7 135 aa4.61□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Lce1dQ9D731 133 aa4.61□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Lce1eQ9D139 143 aa4.61□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Dnah9B1AR51 4484 aa4.6□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Pkhd1l1Q80ZA4 4249 aa4.6□□□□□ -1.67
Col7a1-202ENSMUST00000112070 Dnah11E9Q7N9 4488 aa4.59□□□□□ -1.68
Col7a1-202ENSMUST00000112070 Dnah17Q69Z23 4481 aa4.55□□□□□ -1.68
Col7a1-202ENSMUST00000112070 Sprr2hO70559 108 aa4.55□□□□□ -1.68
Col7a1-202ENSMUST00000112070 Prm1P02319 51 aa4.54□□□□□ -1.68
Col7a1-202ENSMUST00000112070 Gm38119A0A0A6YX29 146 aa4.52□□□□□ -1.69
Col7a1-202ENSMUST00000112070 ApobE9Q414 4505 aa4.52□□□□□ -1.69
Col7a1-202ENSMUST00000112070 Stard9Q80TF6 4561 aa4.52□□□□□ -1.69
Col7a1-202ENSMUST00000112070 Pkd1O08852 4293 aa4.52□□□□□ -1.69
Col7a1-202ENSMUST00000112070 PlecQ9QXS1 4691 aaKnown RBP4.5□□□□□ -1.69
Col7a1-202ENSMUST00000112070 Ryr1E9PZQ0 5035 aa4.49□□□□□ -1.69
Col7a1-202ENSMUST00000112070 Krtap19-1Q925H2 87 aa4.47□□□□□ -1.69
Col7a1-202ENSMUST00000112070 Dync1h1Q9JHU4 4644 aaKnown RBP4.4□□□□□ -1.7
Col7a1-202ENSMUST00000112070 Dnah8Q91XQ0 4731 aa4.37□□□□□ -1.71
Col7a1-202ENSMUST00000112070 Fat1A0A1L1SQU7 4645 aa4.32□□□□□ -1.72
Col7a1-202ENSMUST00000112070 SacsQ9JLC8 4582 aa4.31□□□□□ -1.72
Col7a1-202ENSMUST00000112070 Mt3P28184 68 aa4.3□□□□□ -1.72
Col7a1-202ENSMUST00000112070 Mycbp2Q7TPH6 4711 aa4.28□□□□□ -1.72
Col7a1-202ENSMUST00000112070 Sprr2dO70555 85 aa4.24□□□□□ -1.73
Col7a1-202ENSMUST00000112070 Lrp1bQ9JI18 4599 aa4.24□□□□□ -1.73
Col7a1-202ENSMUST00000112070 Krtap1-3A2A588 173 aa4.22□□□□□ -1.73
Col7a1-202ENSMUST00000112070 Gm7735D3YX18 52 aa4.16□□□□□ -1.74
Col7a1-202ENSMUST00000112070 Fat2Q5F226 4351 aa4.14□□□□□ -1.75
Col7a1-202ENSMUST00000112070 Gm9789Q8BIG3 52 aa4.13□□□□□ -1.75
Col7a1-202ENSMUST00000112070 Gm11562A0PK51 136 aa4.06□□□□□ -1.76
Col7a1-202ENSMUST00000112070 Fat3Q8BNA6 4555 aa4.06□□□□□ -1.76
Col7a1-202ENSMUST00000112070 Gm11569B1AQB1 180 aa4.02□□□□□ -1.77
Col7a1-202ENSMUST00000112070 Gm10061D3Z714 54 aa4.02□□□□□ -1.77
Col7a1-202ENSMUST00000112070 Gm11938Q9D3H4 131 aa4.02□□□□□ -1.77
Col7a1-202ENSMUST00000112070 Mt4P47945 62 aa3.98□□□□□ -1.77
Col7a1-202ENSMUST00000112070 Sprr2bO70554 98 aa3.91□□□□□ -1.78
Col7a1-202ENSMUST00000112070 Krtap4-2B1AQ85 167 aa3.87□□□□□ -1.79
Col7a1-202ENSMUST00000112070 PcloQ9QYX7 5068 aa3.86□□□□□ -1.79
Col7a1-202ENSMUST00000112070 Dnhd1D3Z2X2 4750 aa3.84□□□□□ -1.79
Col7a1-202ENSMUST00000112070 Krtap4-6Q3V4B7 195 aa3.78□□□□□ -1.8
Col7a1-202ENSMUST00000112070 Kmt2cQ8BRH4 4903 aa3.74□□□□□ -1.81
Col7a1-202ENSMUST00000112070 Ryr2E9Q401 4966 aaKnown RBP3.73□□□□□ -1.81
Col7a1-202ENSMUST00000112070 Mt1P02802 61 aaKnown RBP3.72□□□□□ -1.81
Col7a1-202ENSMUST00000112070 Lrp2A2ARV4 4660 aa3.7□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Lce1a2Q9D1K4 149 aa3.7□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Lce1a1Q9CQH5 143 aa3.69□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Krtap4-16Q91W93 202 aa3.68□□□□□ -1.82
Col7a1-202ENSMUST00000112070 ZanO88799 5376 aa3.68□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Ryr3A2AGL3 4863 aa3.67□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Lce1kJ3QP15 125 aa3.67□□□□□ -1.82
Col7a1-202ENSMUST00000112070 Krtap4-7Q9D732 168 aa3.66□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 74.2 ms