RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Gm10318A0A1W2P728 225 aa2.27□□□□□ -2.05
Vcan-203ENSMUST00000109546 Muc4Q8JZM8 3443 aa2.25□□□□□ -2.05
Vcan-203ENSMUST00000109546 Lce3eF8VQJ0 98 aa2.24□□□□□ -2.05
Vcan-203ENSMUST00000109546 Lce3fQ6PAI4 98 aa2.24□□□□□ -2.05
Vcan-203ENSMUST00000109546 Lce3dE9Q8V1 98 aa2.23□□□□□ -2.05
Vcan-203ENSMUST00000109546 Dnah3Q8BW94 4083 aa2.22□□□□□ -2.05
Vcan-203ENSMUST00000109546 Muc5acE9QAQ8 3455 aa2.22□□□□□ -2.05
Vcan-203ENSMUST00000109546 Lce3aQ497I5 98 aa2.21□□□□□ -2.06
Vcan-203ENSMUST00000109546 Gm10024A0A0A0MQA4 119 aa2.2□□□□□ -2.06
Vcan-203ENSMUST00000109546 CubnQ9JLB4 3623 aa2.2□□□□□ -2.06
Vcan-203ENSMUST00000109546 Svep1A2AVA0 3567 aa2.15□□□□□ -2.07
Vcan-203ENSMUST00000109546 Vps13bQ80TY5 3993 aa2.14□□□□□ -2.07
Vcan-203ENSMUST00000109546 Dnah7bL7N1Y0 4068 aa2.14□□□□□ -2.07
Vcan-203ENSMUST00000109546 Krtap4-1Q3UUY3 169 aa2.13□□□□□ -2.07
Vcan-203ENSMUST00000109546 Dnah7cA0A087WR13 4024 aa2.12□□□□□ -2.07
Vcan-203ENSMUST00000109546 Krtap19-4Q925H7 84 aa2.1□□□□□ -2.07
Vcan-203ENSMUST00000109546 Dnah7aE9Q0T8 4024 aa2.1□□□□□ -2.07
Vcan-203ENSMUST00000109546 Dnah6E9Q0B6 4144 aa2.09□□□□□ -2.07
Vcan-203ENSMUST00000109546 Sprr2hO70559 108 aa2.06□□□□□ -2.08
Vcan-203ENSMUST00000109546 Sprr2iO70560 76 aa2.04□□□□□ -2.08
Vcan-203ENSMUST00000109546 Sprr2fO70557 76 aa2.04□□□□□ -2.08
Vcan-203ENSMUST00000109546 Krtap9-3Q3V2C1 136 aa2.03□□□□□ -2.08
Vcan-203ENSMUST00000109546 A0A1Y7VLE6 161 aa2.03□□□□□ -2.08
Vcan-203ENSMUST00000109546 Krtap22-2J3QNX6 67 aa2.03□□□□□ -2.08
Vcan-203ENSMUST00000109546 Sprr2eO70556 76 aa2.03□□□□□ -2.08
Vcan-203ENSMUST00000109546 A0A1Y7VJH8 109 aa2.02□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap28-10A0A1Y7VP58 119 aa2.02□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap28-13A0A087WQP5 138 aa2.01□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap19-2Q925I0 141 aa2□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap19-3Q925H6 87 aa1.99□□□□□ -2.09
Vcan-203ENSMUST00000109546 LorP18165 486 aa1.99□□□□□ -2.09
Vcan-203ENSMUST00000109546 Fras1Q80T14 4010 aa1.98□□□□□ -2.09
Vcan-203ENSMUST00000109546 A030005K14RikA0A1Y7VNY1 122 aa1.98□□□□□ -2.09
Vcan-203ENSMUST00000109546 Gm11563B1AQ90 168 aa1.97□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap4-7Q9D732 168 aa1.97□□□□□ -2.09
Vcan-203ENSMUST00000109546 PrkdcP97313 4128 aa1.97□□□□□ -2.09
Vcan-203ENSMUST00000109546 Krtap16-3Q8C1I6 86 aa1.97□□□□□ -2.09
Vcan-203ENSMUST00000109546 Kmt2aP55200 3966 aa1.97□□□□□ -2.09
Vcan-203ENSMUST00000109546 A0A1Y7VJ07 166 aa1.95□□□□□ -2.1
Vcan-203ENSMUST00000109546 TnxbO35452 4006 aa1.95□□□□□ -2.1
Vcan-203ENSMUST00000109546 PlecQ9QXS1 4691 aaKnown RBP1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1eQ9D139 143 aa1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1jD3YUU5 139 aa1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1gQ9D195 139 aa1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1iQ9D6P5 149 aa1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1hQ9D6R3 140 aa1.93□□□□□ -2.1
Vcan-203ENSMUST00000109546 Huwe1Q7TMY8 4377 aaKnown RBP1.92□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1fB9EJP6 147 aa1.92□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1cQ9D1C5 147 aa1.92□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1lQ9D1G7 135 aa1.92□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1dQ9D731 133 aa1.92□□□□□ -2.1
Vcan-203ENSMUST00000109546 Mt2P02798 61 aa1.91□□□□□ -2.1
Vcan-203ENSMUST00000109546 Sprr2dO70555 85 aa1.91□□□□□ -2.1
Vcan-203ENSMUST00000109546 Ryr1E9PZQ0 5035 aa1.9□□□□□ -2.1
Vcan-203ENSMUST00000109546 Lce1bQ9D149 137 aa1.9□□□□□ -2.11
Vcan-203ENSMUST00000109546 Pkhd1E9PZ36 4059 aa1.89□□□□□ -2.11
Vcan-203ENSMUST00000109546 Krtap1-3A2A588 173 aa1.89□□□□□ -2.11
Vcan-203ENSMUST00000109546 Gm11555B1AQ89 175 aa1.89□□□□□ -2.11
Vcan-203ENSMUST00000109546 A030014E15RikA0A1Y7VJV2 120 aa1.87□□□□□ -2.11
Vcan-203ENSMUST00000109546 Dnah14A0A140LIJ4 4489 aa1.87□□□□□ -2.11
Vcan-203ENSMUST00000109546 A030003K21RikA0A1Y7VIM3 128 aa1.86□□□□□ -2.11
Vcan-203ENSMUST00000109546 Krtap9-5A2A5X3 358 aa1.85□□□□□ -2.11
Vcan-203ENSMUST00000109546 Gm7544A0A1Y7VJ58 118 aa1.85□□□□□ -2.11
Vcan-203ENSMUST00000109546 Dnah10D3YYQ8 4591 aa1.83□□□□□ -2.12
Vcan-203ENSMUST00000109546 A030005L19RikA0A1Y7VIU2 113 aa1.83□□□□□ -2.12
Vcan-203ENSMUST00000109546 HydinQ80W93 5154 aa1.83□□□□□ -2.12
Vcan-203ENSMUST00000109546 Stard9Q80TF6 4561 aa1.82□□□□□ -2.12
Vcan-203ENSMUST00000109546 Dnah8Q91XQ0 4731 aa1.82□□□□□ -2.12
Vcan-203ENSMUST00000109546 Krtap4-2B1AQ85 167 aa1.82□□□□□ -2.12
Vcan-203ENSMUST00000109546 Dnah1E9Q8T7 4250 aa1.82□□□□□ -2.12
Vcan-203ENSMUST00000109546 Herc2Q4U2R1 4836 aa1.82□□□□□ -2.12
Vcan-203ENSMUST00000109546 SacsQ9JLC8 4582 aa1.81□□□□□ -2.12
Vcan-203ENSMUST00000109546 Sprr2bO70554 98 aa1.79□□□□□ -2.12
Vcan-203ENSMUST00000109546 Dnah11E9Q7N9 4488 aa1.78□□□□□ -2.12
Vcan-203ENSMUST00000109546 Ryr3A2AGL3 4863 aa1.76□□□□□ -2.13
Vcan-203ENSMUST00000109546 Lrp1Q91ZX7 4545 aaKnown RBP1.76□□□□□ -2.13
Vcan-203ENSMUST00000109546 Dync1h1Q9JHU4 4644 aaKnown RBP1.76□□□□□ -2.13
Vcan-203ENSMUST00000109546 Gm6217A0A1Y7VJK9 128 aa1.75□□□□□ -2.13
Vcan-203ENSMUST00000109546 Lce1mQ9CR91 182 aa1.75□□□□□ -2.13
Vcan-203ENSMUST00000109546 Pkhd1l1Q80ZA4 4249 aa1.75□□□□□ -2.13
Vcan-203ENSMUST00000109546 Gm38119A0A0A6YX29 146 aa1.75□□□□□ -2.13
Vcan-203ENSMUST00000109546 Gm11938Q9D3H4 131 aa1.74□□□□□ -2.13
Vcan-203ENSMUST00000109546 Dnah5Q8VHE6 4621 aa1.74□□□□□ -2.13
Vcan-203ENSMUST00000109546 PcloQ9QYX7 5068 aa1.73□□□□□ -2.13
Vcan-203ENSMUST00000109546 Ryr2E9Q401 4966 aaKnown RBP1.73□□□□□ -2.13
Vcan-203ENSMUST00000109546 Mdn1A2ANY6 5589 aaKnown RBP1.72□□□□□ -2.13
Vcan-203ENSMUST00000109546 Vps13dB1ART2 4390 aa1.72□□□□□ -2.13
Vcan-203ENSMUST00000109546 ApobE9Q414 4505 aa1.71□□□□□ -2.14
Vcan-203ENSMUST00000109546 Hectd4E9Q2E4 4418 aa1.71□□□□□ -2.14
Vcan-203ENSMUST00000109546 Krtap19-1Q925H2 87 aa1.71□□□□□ -2.14
Vcan-203ENSMUST00000109546 Dync2h1Q45VK7 4306 aa1.71□□□□□ -2.14
Vcan-203ENSMUST00000109546 Dnah17Q69Z23 4481 aa1.71□□□□□ -2.14
Vcan-203ENSMUST00000109546 Mycbp2Q7TPH6 4711 aa1.7□□□□□ -2.14
Vcan-203ENSMUST00000109546 Dnhd1D3Z2X2 4750 aa1.7□□□□□ -2.14
Vcan-203ENSMUST00000109546 Fat1A0A1L1SQU7 4645 aa1.7□□□□□ -2.14
Vcan-203ENSMUST00000109546 Macf1Q9QXZ0 7354 aaKnown RBP1.69□□□□□ -2.14
Vcan-203ENSMUST00000109546 Fat3Q8BNA6 4555 aa1.69□□□□□ -2.14
Vcan-203ENSMUST00000109546 DstQ91ZU6 7393 aaKnown RBP1.69□□□□□ -2.14
Vcan-203ENSMUST00000109546 Kiaa1109A2AAE1 5005 aa1.69□□□□□ -2.14
Vcan-203ENSMUST00000109546 Dnah9B1AR51 4484 aa1.69□□□□□ -2.14
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms