RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 ApobE9Q414 4505 aa4.71□□□□□ -1.65
Limch1-201ENSMUST00000038188 Hspg2Q05793 3707 aaKnown RBP4.71□□□□□ -1.66
Limch1-201ENSMUST00000038188 Krtap3-1A2A591 98 aa4.7□□□□□ -1.66
Limch1-201ENSMUST00000038188 Dnah1E9Q8T7 4250 aa4.68□□□□□ -1.66
Limch1-201ENSMUST00000038188 Dnah11E9Q7N9 4488 aa4.67□□□□□ -1.66
Limch1-201ENSMUST00000038188 Krtap1-5A2A590 122 aa4.65□□□□□ -1.66
Limch1-201ENSMUST00000038188 Dnah3Q8BW94 4083 aa4.65□□□□□ -1.67
Limch1-201ENSMUST00000038188 Dnah8Q91XQ0 4731 aa4.63□□□□□ -1.67
Limch1-201ENSMUST00000038188 Ryr3A2AGL3 4863 aa4.62□□□□□ -1.67
Limch1-201ENSMUST00000038188 Mycbp2Q7TPH6 4711 aa4.62□□□□□ -1.67
Limch1-201ENSMUST00000038188 Dnah9B1AR51 4484 aa4.62□□□□□ -1.67
Limch1-201ENSMUST00000038188 Krtap1-4Q3V2D6 188 aa4.62□□□□□ -1.67
Limch1-201ENSMUST00000038188 SacsQ9JLC8 4582 aa4.6□□□□□ -1.67
Limch1-201ENSMUST00000038188 Fat1A0A1L1SQU7 4645 aa4.6□□□□□ -1.67
Limch1-201ENSMUST00000038188 Krtap3-2Q9D638 99 aa4.6□□□□□ -1.67
Limch1-201ENSMUST00000038188 Krtap3-3Q9D7P0 99 aa4.6□□□□□ -1.67
Limch1-201ENSMUST00000038188 Gm9789Q8BIG3 52 aa4.57□□□□□ -1.68
Limch1-201ENSMUST00000038188 Krtap12-1Q9Z287 130 aa4.57□□□□□ -1.68
Limch1-201ENSMUST00000038188 Kmt2aP55200 3966 aa4.57□□□□□ -1.68
Limch1-201ENSMUST00000038188 Csmd3Q80T79 3707 aa4.57□□□□□ -1.68
Limch1-201ENSMUST00000038188 2310046K23RikA0A0A6YVW6 87 aa4.56□□□□□ -1.68
Limch1-201ENSMUST00000038188 Ndufaf8A2AMZ4 74 aa4.56□□□□□ -1.68
Limch1-201ENSMUST00000038188 Ryr2E9Q401 4966 aaKnown RBP4.56□□□□□ -1.68
Limch1-201ENSMUST00000038188 Fras1Q80T14 4010 aa4.54□□□□□ -1.68
Limch1-201ENSMUST00000038188 Herc2Q4U2R1 4836 aa4.54□□□□□ -1.68
Limch1-201ENSMUST00000038188 Dnah2P0C6F1 4456 aa4.53□□□□□ -1.68
Limch1-201ENSMUST00000038188 Dnah7bL7N1Y0 4068 aa4.52□□□□□ -1.69
Limch1-201ENSMUST00000038188 Krtap9-5A2A5X3 358 aa4.51□□□□□ -1.69
Limch1-201ENSMUST00000038188 Krtap4-2B1AQ85 167 aa4.51□□□□□ -1.69
Limch1-201ENSMUST00000038188 Fat3Q8BNA6 4555 aa4.51□□□□□ -1.69
Limch1-201ENSMUST00000038188 Lrp1bQ9JI18 4599 aa4.49□□□□□ -1.69
Limch1-201ENSMUST00000038188 Dnhd1D3Z2X2 4750 aa4.48□□□□□ -1.69
Limch1-201ENSMUST00000038188 Gm38119A0A0A6YX29 146 aa4.47□□□□□ -1.69
Limch1-201ENSMUST00000038188 Gm11569B1AQB1 180 aa4.46□□□□□ -1.7
Limch1-201ENSMUST00000038188 Krtap19-3Q925H6 87 aa4.44□□□□□ -1.7
Limch1-201ENSMUST00000038188 Gm9112A2AI92 75 aa4.43□□□□□ -1.7
Limch1-201ENSMUST00000038188 Krtap7-1Q9D3I6 87 aa4.42□□□□□ -1.7
Limch1-201ENSMUST00000038188 Krtap1-3A2A588 173 aa4.4□□□□□ -1.7
Limch1-201ENSMUST00000038188 Krtap16-3Q8C1I6 86 aa4.39□□□□□ -1.71
Limch1-201ENSMUST00000038188 Kiaa1109A2AAE1 5005 aa4.37□□□□□ -1.71
Limch1-201ENSMUST00000038188 Gm10061D3Z714 54 aa4.36□□□□□ -1.71
Limch1-201ENSMUST00000038188 Lce1gQ9D195 139 aa4.33□□□□□ -1.72
Limch1-201ENSMUST00000038188 Krtap19-9bQ99NG9 58 aa4.32□□□□□ -1.72
Limch1-201ENSMUST00000038188 Lrp2A2ARV4 4660 aa4.31□□□□□ -1.72
Limch1-201ENSMUST00000038188 Sprr2a3Q4KL71 83 aa4.3□□□□□ -1.72
Limch1-201ENSMUST00000038188 Sprr2a1Q9CQK8 83 aa4.3□□□□□ -1.72
Limch1-201ENSMUST00000038188 Hectd4E9Q2E4 4418 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 Krtap17-1A2A5X6 109 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 SmcpP15265 143 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 Lce3bQ9CQM7 98 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 Krtap19-1Q925H2 87 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 Birc6O88738 4882 aa4.28□□□□□ -1.72
Limch1-201ENSMUST00000038188 HydinQ80W93 5154 aa4.27□□□□□ -1.73
Limch1-201ENSMUST00000038188 Dnah7aE9Q0T8 4024 aa4.27□□□□□ -1.73
Limch1-201ENSMUST00000038188 Dnah7cA0A087WR13 4024 aa4.25□□□□□ -1.73
Limch1-201ENSMUST00000038188 Lrp1Q91ZX7 4545 aaKnown RBP4.24□□□□□ -1.73
Limch1-201ENSMUST00000038188 Herc1E9PZP8 4859 aa4.24□□□□□ -1.73
Limch1-201ENSMUST00000038188 Sprr2iO70560 76 aa4.23□□□□□ -1.73
Limch1-201ENSMUST00000038188 Krtap4-6Q3V4B7 195 aa4.23□□□□□ -1.73
Limch1-201ENSMUST00000038188 4932415D10RikA0A1W2P6U8 4986 aa4.21□□□□□ -1.74
Limch1-201ENSMUST00000038188 Vps13bQ80TY5 3993 aa4.21□□□□□ -1.74
Limch1-201ENSMUST00000038188 Mt4P47945 62 aa4.2□□□□□ -1.74
Limch1-201ENSMUST00000038188 Krtap19-2Q925I0 141 aa4.15□□□□□ -1.74
Limch1-201ENSMUST00000038188 Gm11596B1AQB0 205 aa4.15□□□□□ -1.75
Limch1-201ENSMUST00000038188 Mt2P02798 61 aa4.15□□□□□ -1.75
Limch1-201ENSMUST00000038188 PcloQ9QYX7 5068 aa4.14□□□□□ -1.75
Limch1-201ENSMUST00000038188 Krtap22-2J3QNX6 67 aa4.14□□□□□ -1.75
Limch1-201ENSMUST00000038188 Fat2Q5F226 4351 aa4.12□□□□□ -1.75
Limch1-201ENSMUST00000038188 Sprr2fO70557 76 aa4.09□□□□□ -1.76
Limch1-201ENSMUST00000038188 Lce1lQ9D1G7 135 aa4.08□□□□□ -1.76
Limch1-201ENSMUST00000038188 Krtap4-1Q3UUY3 169 aa4.07□□□□□ -1.76
Limch1-201ENSMUST00000038188 Lce3cQ91V05 98 aa4.05□□□□□ -1.76
Limch1-201ENSMUST00000038188 Pkhd1l1Q80ZA4 4249 aa4.04□□□□□ -1.76
Limch1-201ENSMUST00000038188 Pkhd1E9PZ36 4059 aa4.03□□□□□ -1.76
Limch1-201ENSMUST00000038188 Gm10272F7CZ33 110 aa4.03□□□□□ -1.76
Limch1-201ENSMUST00000038188 Gm11564A2A4L9 201 aa4□□□□□ -1.77
Limch1-201ENSMUST00000038188 Gm11563B1AQ90 168 aa4□□□□□ -1.77
Limch1-201ENSMUST00000038188 Gm11595B1AQA7 289 aa4□□□□□ -1.77
Limch1-201ENSMUST00000038188 Krtap4-8B1AQA8 209 aa4□□□□□ -1.77
Limch1-201ENSMUST00000038188 Syne2Q6ZWQ0 6874 aaKnown RBP3.98□□□□□ -1.77
Limch1-201ENSMUST00000038188 Krtap9-3Q3V2C1 136 aa3.97□□□□□ -1.77
Limch1-201ENSMUST00000038188 Lce1bQ9D149 137 aa3.97□□□□□ -1.77
Limch1-201ENSMUST00000038188 Kmt2cQ8BRH4 4903 aa3.95□□□□□ -1.78
Limch1-201ENSMUST00000038188 Gm11562A0PK51 136 aa3.94□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1jD3YUU5 139 aa3.94□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1fB9EJP6 147 aa3.93□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1cQ9D1C5 147 aa3.93□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1iQ9D6P5 149 aa3.93□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1hQ9D6R3 140 aa3.93□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce1dQ9D731 133 aa3.93□□□□□ -1.78
Limch1-201ENSMUST00000038188 Krtap4-9B1AQA9 244 aa3.92□□□□□ -1.78
Limch1-201ENSMUST00000038188 Lce3dE9Q8V1 98 aa3.91□□□□□ -1.78
Limch1-201ENSMUST00000038188 Mdn1A2ANY6 5589 aaKnown RBP3.87□□□□□ -1.79
Limch1-201ENSMUST00000038188 Abca13Q5SSE9 5034 aa3.86□□□□□ -1.79
Limch1-201ENSMUST00000038188 Lce3eF8VQJ0 98 aa3.86□□□□□ -1.79
Limch1-201ENSMUST00000038188 Lce3fQ6PAI4 98 aa3.86□□□□□ -1.79
Limch1-201ENSMUST00000038188 2300003K06RikA2A4M0 262 aa3.85□□□□□ -1.79
Limch1-201ENSMUST00000038188 Krtap4-13Q9D7P3 165 aa3.84□□□□□ -1.79
Limch1-201ENSMUST00000038188 Fat4Q2PZL6 4981 aa3.83□□□□□ -1.8
Limch1-201ENSMUST00000038188 Krtap4-7Q9D732 168 aa3.82□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 110.6 ms