RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W YTP1P53584 459 aa3.79□□□□□ -1.8
SWI1YPL016W ARP4P80428 489 aa3.79□□□□□ -1.8
SWI1YPL016W YPL277CQ08989 487 aa3.79□□□□□ -1.8
SWI1YPL016W YOR342CQ12182 319 aa3.79□□□□□ -1.8
SWI1YPL016W TUB2P02557 457 aaKnown RBP3.79□□□□□ -1.8
SWI1YPL016W NFT1P0CE68 1218 aa3.79□□□□□ -1.8
SWI1YPL016W RGP1P16664 663 aa3.79□□□□□ -1.8
SWI1YPL016W KRE6P32486 720 aa3.79□□□□□ -1.8
SWI1YPL016W PPQ1P32945 549 aa3.79□□□□□ -1.8
SWI1YPL016W JNM1P36224 373 aa3.79□□□□□ -1.8
SWI1YPL016W YFH7P43591 353 aa3.79□□□□□ -1.8
SWI1YPL016W PSP1P50896 841 aaKnown RBP3.79□□□□□ -1.8
SWI1YPL016W YDR249CQ03787 373 aa3.79□□□□□ -1.8
SWI1YPL016W YDR514CQ04408 483 aa3.79□□□□□ -1.8
SWI1YPL016W NSE3Q05541 303 aa3.79□□□□□ -1.8
SWI1YPL016W SPH1Q06160 661 aa3.79□□□□□ -1.8
SWI1YPL016W GPN3Q06543 272 aa3.79□□□□□ -1.8
SWI1YPL016W MED2Q12124 431 aa3.79□□□□□ -1.8
SWI1YPL016W LSO2Q3E772 92 aaKnown RBP3.79□□□□□ -1.8
SWI1YPL016W PEX3P28795 441 aa3.78□□□□□ -1.8
SWI1YPL016W GUT2P32191 649 aa3.78□□□□□ -1.8
SWI1YPL016W LYP1P32487 611 aa3.78□□□□□ -1.8
SWI1YPL016W KAP122P32767 1081 aa3.78□□□□□ -1.8
SWI1YPL016W CNS1P33313 385 aa3.78□□□□□ -1.8
SWI1YPL016W ADE17P38009 592 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W SEO1P39709 593 aa3.78□□□□□ -1.8
SWI1YPL016W COG1P53079 417 aa3.78□□□□□ -1.8
SWI1YPL016W YGL138CP53122 345 aa3.78□□□□□ -1.8
SWI1YPL016W MPS1P54199 764 aa3.78□□□□□ -1.8
SWI1YPL016W RPN4Q03465 531 aa3.78□□□□□ -1.8
SWI1YPL016W ARP10Q04549 284 aa3.78□□□□□ -1.8
SWI1YPL016W BAG7Q12128 409 aa3.78□□□□□ -1.8
SWI1YPL016W CCP1P00431 361 aa3.78□□□□□ -1.8
SWI1YPL016W PTP1P25044 335 aa3.78□□□□□ -1.8
SWI1YPL016W YCR101CP25607 182 aa3.78□□□□□ -1.8
SWI1YPL016W SMC1P32908 1225 aa3.78□□□□□ -1.8
SWI1YPL016W YHR033WP38690 423 aa3.78□□□□□ -1.8
SWI1YPL016W TRM5P38793 499 aa3.78□□□□□ -1.8
SWI1YPL016W JEM1P40358 645 aa3.78□□□□□ -1.8
SWI1YPL016W ERG10P41338 398 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W ALY2P47029 1046 aa3.78□□□□□ -1.8
SWI1YPL016W HOP2P53187 214 aa3.78□□□□□ -1.8
SWI1YPL016W VPS62P53285 467 aa3.78□□□□□ -1.8
SWI1YPL016W TIM13P53299 105 aa3.78□□□□□ -1.8
SWI1YPL016W IGO1P53897 168 aa3.78□□□□□ -1.8
SWI1YPL016W MTD1Q02046 320 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W MRPL13Q02204 264 aa3.78□□□□□ -1.8
SWI1YPL016W YDR239CQ03780 787 aa3.78□□□□□ -1.8
SWI1YPL016W SHE9Q04172 456 aa3.78□□□□□ -1.8
SWI1YPL016W CDC8P00572 216 aa3.78□□□□□ -1.8
SWI1YPL016W RPS24AP0CX31 135 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W RPS24BP0CX32 135 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W CHS2P14180 963 aa3.78□□□□□ -1.8
SWI1YPL016W ARO3P14843 370 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W CTR86P25355 563 aa3.78□□□□□ -1.8
SWI1YPL016W PEP3P27801 918 aa3.78□□□□□ -1.8
SWI1YPL016W PRP19P32523 503 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W APN2P38207 520 aa3.78□□□□□ -1.8
SWI1YPL016W LEU5P38702 357 aa3.78□□□□□ -1.8
SWI1YPL016W ASG1P40467 964 aa3.78□□□□□ -1.8
SWI1YPL016W LYS4P49367 693 aaPredicted RBP3.78□□□□□ -1.8
SWI1YPL016W RSC4Q02206 625 aa3.78□□□□□ -1.8
SWI1YPL016W SSY1Q03770 852 aa3.78□□□□□ -1.8
SWI1YPL016W FMN1Q03778 218 aa3.78□□□□□ -1.8
SWI1YPL016W SYO1Q07395 620 aa3.78□□□□□ -1.8
SWI1YPL016W THI3Q07471 609 aa3.78□□□□□ -1.8
SWI1YPL016W SAM4Q08985 325 aaKnown RBP3.78□□□□□ -1.8
SWI1YPL016W YPR202WQ08993 238 aa3.78□□□□□ -1.8
SWI1YPL016W ENV7Q12003 364 aa3.78□□□□□ -1.8
SWI1YPL016W SET6Q12529 373 aa3.78□□□□□ -1.8
SWI1YPL016W ARG3P05150 338 aa3.77□□□□□ -1.81
SWI1YPL016W RSC6P25632 483 aa3.77□□□□□ -1.81
SWI1YPL016W ZIP1P31111 875 aa3.77□□□□□ -1.81
SWI1YPL016W LST4P34239 828 aa3.77□□□□□ -1.81
SWI1YPL016W NUP133P36161 1157 aa3.77□□□□□ -1.81
SWI1YPL016W PCS60P38137 543 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81 RIP-Chip
SWI1YPL016W RXT2P38255 430 aa3.77□□□□□ -1.81
SWI1YPL016W GIC1P38785 314 aa3.77□□□□□ -1.81
SWI1YPL016W ICP55P40051 511 aa3.77□□□□□ -1.81
SWI1YPL016W CCT7P42943 550 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W CAF16P43569 289 aa3.77□□□□□ -1.81
SWI1YPL016W UTP14Q04500 899 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SWI1YPL016W PUS9Q12069 462 aa3.77□□□□□ -1.81
SWI1YPL016W GRX6Q12438 231 aa3.77□□□□□ -1.81
SWI1YPL016W TPK2P06245 380 aa3.77□□□□□ -1.81
SWI1YPL016W KIN1P13185 1064 aa3.77□□□□□ -1.81
SWI1YPL016W AAC3P18238 307 aa3.77□□□□□ -1.81
SWI1YPL016W CBR1P38626 284 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W PXA1P41909 870 aa3.77□□□□□ -1.81
SWI1YPL016W ARE2P53629 642 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W ALD6P54115 500 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W MDM1Q01846 1127 aa3.77□□□□□ -1.81
SWI1YPL016W PML39Q03760 334 aa3.77□□□□□ -1.81
SWI1YPL016W SNX3Q08826 162 aaKnown RBP3.77□□□□□ -1.81
SWI1YPL016W FLC1Q08967 793 aa3.77□□□□□ -1.81
SWI1YPL016W MAS2P11914 482 aa3.77□□□□□ -1.81
SWI1YPL016W CDC23P16522 626 aa3.77□□□□□ -1.81
SWI1YPL016W AEP2P22136 580 aa3.77□□□□□ -1.81
SWI1YPL016W CNB1P25296 175 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms