RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	SNU56	Q03782	492 aa	Known RBP	3.15	□□□□□ -1.91
RIO2	YNL207W	YOL114C	Q12322	202 aa		3.15	□□□□□ -1.91
RIO2	YNL207W	YER175W-A	Q8TGU4	54 aa		3.15	□□□□□ -1.91
RIO2	YNL207W	MIS1	P09440	975 aa	Known RBP	3.14	□□□□□ -1.91
RIO2	YNL207W	COQ3	P27680	312 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	GSH1	P32477	678 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	ERC1	P38767	581 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	JHD1	P40034	492 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	YNL058C	P53947	316 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	RPL15B	P54780	204 aa	Predicted RBP	3.14	□□□□□ -1.91
RIO2	YNL207W	CRF1	Q04930	467 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	AAD4	Q07747	329 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	HER1	Q12276	1246 aa		3.14	□□□□□ -1.91
RIO2	YNL207W	YPR089W	O13585	888 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	GCD7	P32502	381 aa	Predicted RBP	3.13	□□□□□ -1.91
RIO2	YNL207W	FRD1	P32614	470 aa	Known RBP	3.13	□□□□□ -1.91
RIO2	YNL207W	APM3	P38153	483 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	SPC97	P38863	823 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	SKP2	P42843	763 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	ESF2	P53743	316 aa	Known RBP	3.13	□□□□□ -1.91
RIO2	YNL207W	ATG21	Q02887	496 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	AIM6	Q07716	390 aa		3.13	□□□□□ -1.91
RIO2	YNL207W	GET3	Q12154	354 aa	Known RBP	3.13	□□□□□ -1.91
RIO2	YNL207W	PIF1	P07271	859 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	AIM17	P23180	465 aa	Known RBP	3.12	□□□□□ -1.91
RIO2	YNL207W	DPB3	P27344	201 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	YMR124W	P39523	943 aa	Known RBP	3.12	□□□□□ -1.91
RIO2	YNL207W	CAB2	P40506	365 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	UBX4	P54730	416 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	YAT1	P80235	687 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	YPL108W	Q02872	168 aa	Predicted RBP	3.12	□□□□□ -1.91
RIO2	YNL207W	HIM1	Q06674	414 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	PFA4	Q12006	378 aa		3.12	□□□□□ -1.91
RIO2	YNL207W	POL3	P15436	1097 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	SIP1	P32578	815 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	MRS6	P32864	603 aa	Known RBP	3.11	□□□□□ -1.91
RIO2	YNL207W	PXL1	P36166	706 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	VBA2	P38358	474 aa	Known RBP	3.11	□□□□□ -1.91
RIO2	YNL207W	QRI7	P43122	407 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	IWR1	Q07532	353 aa	Predicted RBP	3.11	□□□□□ -1.91
RIO2	YNL207W	YPL191C	Q08930	360 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	ICL2	Q12031	575 aa		3.11	□□□□□ -1.91
RIO2	YNL207W	ILS1	P09436	1072 aa	Known RBP	3.1	□□□□□ -1.91
RIO2	YNL207W	PDE1	P22434	369 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	MGM1	P32266	881 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	YHL041W	P38730	149 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	FLO5	P38894	1075 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	MAD3	P47074	515 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	NPA3	P47122	385 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	YBR255C-A	Q3E776	120 aa		3.1	□□□□□ -1.91
RIO2	YNL207W	PGI1	P12709	554 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	SEC18	P18759	758 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	SIR1	P21691	654 aa		3.09	□□□□□ -1.91
RIO2	YNL207W	MCM3	P24279	971 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	NUP120	P35729	1037 aa		3.09	□□□□□ -1.91
RIO2	YNL207W	RPF2	P36160	344 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	GND1	P38720	489 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	STT3	P39007	718 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	CDC1	P40986	491 aa		3.09	□□□□□ -1.91
RIO2	YNL207W	MEP2	P41948	499 aa		3.09	□□□□□ -1.91
RIO2	YNL207W	LYS20	P48570	428 aa	Known RBP	3.09	□□□□□ -1.91
RIO2	YNL207W	YOR389W	Q08912	624 aa		3.09	□□□□□ -1.91
RIO2	YNL207W	MSS18	P08593	268 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	RAD16	P31244	790 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	RPT3	P33298	428 aa	Known RBP	3.08	□□□□□ -1.92
RIO2	YNL207W	TOM71	P38825	639 aa	Known RBP	3.08	□□□□□ -1.92
RIO2	YNL207W	ACA1	P39970	489 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	PSF2	P40359	213 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	YIL152W	P40455	235 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	YJL107C	P42947	387 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	VTC3	Q02725	835 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	ATG16	Q03818	150 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	MRPL1	Q04599	285 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	EIS1	Q05050	843 aa	Known RBP	3.08	□□□□□ -1.92
RIO2	YNL207W	BLS1	Q06071	122 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	PSR2	Q07949	397 aa		3.08	□□□□□ -1.92
RIO2	YNL207W	NUC1	P08466	329 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
RIO2	YNL207W	MSM1	P22438	575 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	CNA1	P23287	553 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	RIT1	P23796	513 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	CLB4	P24871	460 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	PWP2	P25635	923 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	PTC6	P25646	442 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	ATO2	P32907	282 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	FSH1	P38777	243 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	FUN12	P39730	1002 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	UBX6	P47049	396 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	TAM41	P53230	385 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	YPR003C	P53394	754 aa		3.07	□□□□□ -1.92
RIO2	YNL207W	CPR6	P53691	371 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	EAF7	P53911	425 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	BRE1	Q07457	700 aa	Known RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	LEA1	Q08963	238 aa	Predicted RBP	3.07	□□□□□ -1.92
RIO2	YNL207W	COX1	P00401	534 aa		3.06	□□□□□ -1.92
RIO2	YNL207W	ILV2	P07342	687 aa	Known RBP	3.06	□□□□□ -1.92
RIO2	YNL207W	PET122	P10355	254 aa		3.06	□□□□□ -1.92
RIO2	YNL207W	HES1	P35843	434 aa		3.06	□□□□□ -1.92
RIO2	YNL207W	NPR3	P38742	1146 aa		3.06	□□□□□ -1.92
RIO2	YNL207W	UME6	P39001	836 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms