RNA–Protein interactions for RNA: YNL026W

SAM50, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM50, Length 1,455 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM50YNL026W STE4P18851 423 aa8.43□□□□□ -1.06
SAM50YNL026W BIT2P38346 545 aa8.43□□□□□ -1.06
SAM50YNL026W YHL041WP38730 149 aa8.43□□□□□ -1.06
SAM50YNL026W PPE1P38796 400 aa8.43□□□□□ -1.06
SAM50YNL026W MNN11P46985 422 aaKnown RBP8.43□□□□□ -1.06
SAM50YNL026W PRP31P49704 494 aaPredicted RBP8.43□□□□□ -1.06
SAM50YNL026W CMS1Q07897 291 aaKnown RBP8.43□□□□□ -1.06
SAM50YNL026W OCA6Q12454 224 aa8.43□□□□□ -1.06
SAM50YNL026W INH1P01097 85 aa8.42□□□□□ -1.06
SAM50YNL026W YKR104WP0CE69 306 aa8.42□□□□□ -1.06
SAM50YNL026W SCH9P11792 824 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W GFA1P14742 717 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W PRP9P19736 530 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W HXT3P32466 567 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W GDT1P38301 280 aaPredicted RBP8.42□□□□□ -1.06
SAM50YNL026W SMC2P38989 1170 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W ELO1P39540 310 aa8.42□□□□□ -1.06
SAM50YNL026W YNL247WP53852 767 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W SSL2Q00578 843 aa8.42□□□□□ -1.06
SAM50YNL026W EFG1Q3E705 233 aaKnown RBP8.42□□□□□ -1.06
SAM50YNL026W YOR338WQ99326 363 aa8.42□□□□□ -1.06
SAM50YNL026W SNT1P25357 1226 aa8.41□□□□□ -1.06
SAM50YNL026W PAT1P25644 796 aaKnown RBP8.41□□□□□ -1.06
SAM50YNL026W CBF5P33322 483 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SAM50YNL026W AIM18P38884 321 aa8.41□□□□□ -1.06
SAM50YNL026W KHA1P40309 873 aa8.41□□□□□ -1.06
SAM50YNL026W SPC105P53148 917 aa8.41□□□□□ -1.06
SAM50YNL026W VAC7P53950 1165 aa8.41□□□□□ -1.06
SAM50YNL026W TFB4Q12004 338 aa8.41□□□□□ -1.06
SAM50YNL026W RRP6Q12149 733 aaKnown RBP8.41□□□□□ -1.06
SAM50YNL026W SUL2Q12325 893 aa8.41□□□□□ -1.06
SAM50YNL026W YKL068W-AQ3E826 78 aa8.41□□□□□ -1.06
SAM50YNL026W IRS4P36115 615 aaKnown RBP8.4□□□□□ -1.06
SAM50YNL026W LRP1P38801 184 aaKnown RBP8.4□□□□□ -1.06
SAM50YNL026W ATM1P40416 690 aa8.4□□□□□ -1.06
SAM50YNL026W MVP1P40959 511 aaKnown RBP8.4□□□□□ -1.06
SAM50YNL026W TFG2P41896 400 aaPredicted RBP8.4□□□□□ -1.06
SAM50YNL026W TEP1P53916 434 aa8.4□□□□□ -1.06
SAM50YNL026W SYH1Q02875 849 aaKnown RBP8.4□□□□□ -1.06
SAM50YNL026W YDR444WQ04093 687 aa8.4□□□□□ -1.06
SAM50YNL026W TPO1Q07824 586 aa8.4□□□□□ -1.06
SAM50YNL026W YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
SAM50YNL026W PGC1Q08959 321 aa8.4□□□□□ -1.06
SAM50YNL026W SEC39Q12745 709 aa8.4□□□□□ -1.06
SAM50YNL026W SEY1Q99287 776 aa8.4□□□□□ -1.06
SAM50YNL026W MPH2P0CD99 609 aa8.39□□□□□ -1.07
SAM50YNL026W PDR1P12383 1068 aa8.39□□□□□ -1.07
SAM50YNL026W DAL82P21705 255 aa8.39□□□□□ -1.07
SAM50YNL026W CWP1P28319 239 aa8.39□□□□□ -1.07
SAM50YNL026W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SAM50YNL026W RFX1P48743 811 aa8.39□□□□□ -1.07
SAM50YNL026W YGR127WP53275 312 aa8.39□□□□□ -1.07
SAM50YNL026W VPS9P54787 451 aa8.39□□□□□ -1.07
SAM50YNL026W IVY1Q04934 453 aa8.39□□□□□ -1.07
SAM50YNL026W YDR061WQ12298 539 aa8.39□□□□□ -1.07
SAM50YNL026W COX5AP00424 153 aa8.38□□□□□ -1.07
SAM50YNL026W ABF1P14164 731 aa8.38□□□□□ -1.07
SAM50YNL026W SPO12P17123 173 aa8.38□□□□□ -1.07
SAM50YNL026W YCR015CP25616 317 aa8.38□□□□□ -1.07
SAM50YNL026W MEI4P29467 408 aa8.38□□□□□ -1.07
SAM50YNL026W SCD5P34758 872 aa8.38□□□□□ -1.07
SAM50YNL026W MSR1P38714 643 aa8.38□□□□□ -1.07
SAM50YNL026W IST3P40565 148 aaPredicted RBP8.38□□□□□ -1.07
SAM50YNL026W SIP4P46954 829 aa8.38□□□□□ -1.07
SAM50YNL026W CSL4P53859 292 aaPredicted RBP8.38□□□□□ -1.07
SAM50YNL026W REG1Q00816 1014 aa8.38□□□□□ -1.07
SAM50YNL026W PHO13P19881 312 aa8.38□□□□□ -1.07
SAM50YNL026W PPH21P23594 369 aa8.38□□□□□ -1.07
SAM50YNL026W RIO2P40160 425 aaKnown RBP8.38□□□□□ -1.07
SAM50YNL026W CTK3P46963 296 aaPredicted RBP8.38□□□□□ -1.07
SAM50YNL026W PCL10P53124 433 aa8.38□□□□□ -1.07
SAM50YNL026W YGR021WP53212 290 aa8.38□□□□□ -1.07
SAM50YNL026W YNL143CP53908 130 aa8.38□□□□□ -1.07
SAM50YNL026W ENT5Q03769 411 aaKnown RBP8.38□□□□□ -1.07
SAM50YNL026W SKM1Q12469 655 aa8.38□□□□□ -1.07
SAM50YNL026W RBK1P25332 333 aa8.37□□□□□ -1.07
SAM50YNL026W MRS6P32864 603 aaKnown RBP8.37□□□□□ -1.07
SAM50YNL026W SRP72P38688 640 aaKnown RBP8.37□□□□□ -1.07
SAM50YNL026W PMC1P38929 1173 aaPredicted RBP8.37□□□□□ -1.07
SAM50YNL026W ELO3P40319 345 aa8.37□□□□□ -1.07
SAM50YNL026W RPL34BP40525 121 aaKnown RBP8.37□□□□□ -1.07
SAM50YNL026W ROK1P45818 564 aaPredicted RBP8.37□□□□□ -1.07
SAM50YNL026W STR3P53101 465 aaKnown RBP8.37□□□□□ -1.07
SAM50YNL026W ATG16Q03818 150 aa8.37□□□□□ -1.07
SAM50YNL026W TRA1P38811 3744 aa8.36□□□□□ -1.07
SAM50YNL026W TUB1P09733 447 aaKnown RBP8.36□□□□□ -1.07
SAM50YNL026W GLN4P13188 809 aaKnown RBP8.36□□□□□ -1.07
SAM50YNL026W SEC23P15303 768 aaKnown RBP8.36□□□□□ -1.07
SAM50YNL026W GAL11P19659 1081 aa8.36□□□□□ -1.07
SAM50YNL026W RAD51P25454 400 aa8.36□□□□□ -1.07
SAM50YNL026W DBF4P32325 704 aa8.36□□□□□ -1.07
SAM50YNL026W UBS1P38290 277 aa8.36□□□□□ -1.07
SAM50YNL026W CCT6P39079 546 aa8.36□□□□□ -1.07
SAM50YNL026W NUP85P46673 744 aa8.36□□□□□ -1.07
SAM50YNL026W BUD13P46947 266 aaPredicted RBP8.36□□□□□ -1.07
SAM50YNL026W CSN12P47130 423 aa8.36□□□□□ -1.07
SAM50YNL026W SWC4P53201 476 aa8.36□□□□□ -1.07
SAM50YNL026W TIM13P53299 105 aa8.36□□□□□ -1.07
SAM50YNL026W NOG2P53742 486 aaKnown RBP8.36□□□□□ -1.07
SAM50YNL026W MSH6Q03834 1242 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms