RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C HAP2P06774 265 aa5.11□□□□□ -1.59
CCS1YMR038C ATP1P07251 545 aaKnown RBP5.11□□□□□ -1.59
CCS1YMR038C MATALPHA2P0CY08 210 aa5.11□□□□□ -1.59
CCS1YMR038C HMLALPHA2P0CY09 210 aa5.11□□□□□ -1.59
CCS1YMR038C GLN3P18494 730 aa5.11□□□□□ -1.59
CCS1YMR038C ERG4P25340 473 aa5.11□□□□□ -1.59
CCS1YMR038C OPY1P38271 328 aa5.11□□□□□ -1.59
CCS1YMR038C MED6P38782 295 aa5.11□□□□□ -1.59
CCS1YMR038C STT3P39007 718 aaKnown RBP5.11□□□□□ -1.59
CCS1YMR038C HLJ1P48353 224 aa5.11□□□□□ -1.59
CCS1YMR038C PCL10P53124 433 aa5.11□□□□□ -1.59
CCS1YMR038C STP1Q00947 519 aa5.11□□□□□ -1.59
CCS1YMR038C THI73Q07904 523 aa5.11□□□□□ -1.59
CCS1YMR038C TGL5Q12043 749 aa5.11□□□□□ -1.59
CCS1YMR038C ZPS1Q12512 249 aa5.11□□□□□ -1.59
CCS1YMR038C MSB2P32334 1306 aa5.11□□□□□ -1.59
CCS1YMR038C VPH1P32563 840 aaKnown RBP5.1□□□□□ -1.59
CCS1YMR038C CSE1P33307 960 aa5.1□□□□□ -1.59
CCS1YMR038C MNN4P36044 1178 aa5.1□□□□□ -1.59
CCS1YMR038C HEL1P36113 551 aa5.1□□□□□ -1.59
CCS1YMR038C YBR053CP38235 358 aa5.1□□□□□ -1.59
CCS1YMR038C VID24P38263 362 aa5.1□□□□□ -1.59
CCS1YMR038C PIH1P38768 344 aa5.1□□□□□ -1.59
CCS1YMR038C CRP1P38845 465 aaKnown RBP5.1□□□□□ -1.59
CCS1YMR038C MSE1P48525 536 aa5.1□□□□□ -1.59
CCS1YMR038C MUP1P50276 574 aa5.1□□□□□ -1.59
CCS1YMR038C MNP1P53163 194 aaPredicted RBP5.1□□□□□ -1.59
CCS1YMR038C RTT102P53330 157 aa5.1□□□□□ -1.59
CCS1YMR038C YNL146WP53906 100 aa5.1□□□□□ -1.59
CCS1YMR038C IMP4P53941 290 aaKnown RBP5.1□□□□□ -1.59
CCS1YMR038C YLH47Q06493 454 aa5.1□□□□□ -1.59
CCS1YMR038C DNL4Q08387 944 aaPredicted RBP5.1□□□□□ -1.59
CCS1YMR038C PUS9Q12069 462 aa5.1□□□□□ -1.59
CCS1YMR038C PDH1Q12428 516 aaKnown RBP5.1□□□□□ -1.59
CCS1YMR038C PCK1P10963 549 aa5.09□□□□□ -1.59
CCS1YMR038C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
CCS1YMR038C YBR259WP38338 688 aa5.09□□□□□ -1.59
CCS1YMR038C ELO3P40319 345 aa5.09□□□□□ -1.59
CCS1YMR038C YJR096WP47137 282 aa5.09□□□□□ -1.59
CCS1YMR038C PRP31P49704 494 aaPredicted RBP5.09□□□□□ -1.59
CCS1YMR038C NCS2P53923 493 aaPredicted RBP5.09□□□□□ -1.59
CCS1YMR038C ARK1P53974 638 aa5.09□□□□□ -1.59
CCS1YMR038C DLT1Q04216 342 aa5.09□□□□□ -1.59
CCS1YMR038C ADY4Q05955 493 aa5.09□□□□□ -1.59
CCS1YMR038C YLR407WQ06070 228 aa5.09□□□□□ -1.59
CCS1YMR038C IES4Q08561 116 aa5.09□□□□□ -1.59
CCS1YMR038C DCS2Q12123 353 aa5.09□□□□□ -1.59
CCS1YMR038C GET3Q12154 354 aaKnown RBP5.09□□□□□ -1.59
CCS1YMR038C CEX1Q12453 761 aa5.09□□□□□ -1.59
CCS1YMR038C SMC6Q12749 1114 aa5.09□□□□□ -1.59
CCS1YMR038C HSP82P02829 709 aaKnown RBP5.08□□□□□ -1.6
CCS1YMR038C TCP1P12612 559 aaKnown RBP5.08□□□□□ -1.6
CCS1YMR038C CBP3P21560 335 aa5.08□□□□□ -1.6
CCS1YMR038C SKG6P32900 734 aaPredicted RBP5.08□□□□□ -1.6
CCS1YMR038C HMT1P38074 348 aa5.08□□□□□ -1.6
CCS1YMR038C CHS7P38843 316 aa5.08□□□□□ -1.6
CCS1YMR038C ECM1P39715 212 aa5.08□□□□□ -1.6
CCS1YMR038C YER186CP40101 306 aa5.08□□□□□ -1.6
CCS1YMR038C YGR153WP48238 217 aa5.08□□□□□ -1.6
CCS1YMR038C CTF18P49956 741 aa5.08□□□□□ -1.6
CCS1YMR038C STB4P50104 949 aa5.08□□□□□ -1.6
CCS1YMR038C GPG1P53130 126 aa5.08□□□□□ -1.6
CCS1YMR038C TEX1P53851 422 aaKnown RBP5.08□□□□□ -1.6
CCS1YMR038C ARG5,6Q01217 863 aa5.08□□□□□ -1.6
CCS1YMR038C RCR2Q03446 210 aaKnown RBP5.08□□□□□ -1.6
CCS1YMR038C EIS1Q05050 843 aaKnown RBP5.08□□□□□ -1.6
CCS1YMR038C MET3P08536 511 aa5.07□□□□□ -1.6
CCS1YMR038C YEL076C-AP0CX16 216 aa5.07□□□□□ -1.6
CCS1YMR038C YLR464WP0CX17 216 aa5.07□□□□□ -1.6
CCS1YMR038C RPL4AP10664 362 aaKnown RBP5.07□□□□□ -1.6
CCS1YMR038C FRS2P15625 503 aaKnown RBP5.07□□□□□ -1.6
CCS1YMR038C DPH2P32461 534 aa5.07□□□□□ -1.6
CCS1YMR038C COT1P32798 439 aa5.07□□□□□ -1.6
CCS1YMR038C MRX3P38172 270 aa5.07□□□□□ -1.6
CCS1YMR038C YHR112CP38716 378 aa5.07□□□□□ -1.6
CCS1YMR038C SIP3P38717 1229 aa5.07□□□□□ -1.6
CCS1YMR038C YEL076CP39971 216 aa5.07□□□□□ -1.6
CCS1YMR038C GID8P40208 455 aa5.07□□□□□ -1.6
CCS1YMR038C RPL4BP49626 362 aaKnown RBP5.07□□□□□ -1.6
CCS1YMR038C CUL3P53202 744 aa5.07□□□□□ -1.6
CCS1YMR038C CBK1P53894 756 aa5.07□□□□□ -1.6
CCS1YMR038C UME1Q03010 460 aa5.07□□□□□ -1.6
CCS1YMR038C CWC21Q03375 135 aaKnown RBP5.07□□□□□ -1.6
CCS1YMR038C GYL1Q04322 720 aa5.07□□□□□ -1.6
CCS1YMR038C GSF2Q04697 403 aaKnown RBP5.07□□□□□ -1.6
CCS1YMR038C FUS2Q05670 677 aa5.07□□□□□ -1.6
CCS1YMR038C FRE5Q08908 694 aa5.07□□□□□ -1.6
CCS1YMR038C TIP41Q12199 356 aa5.07□□□□□ -1.6
CCS1YMR038C ALG7P07286 448 aa5.06□□□□□ -1.6
CCS1YMR038C SPO11P23179 398 aa5.06□□□□□ -1.6
CCS1YMR038C PRR1P28708 518 aa5.06□□□□□ -1.6
CCS1YMR038C YPT35P38815 214 aaKnown RBP5.06□□□□□ -1.6
CCS1YMR038C CKB2P38930 258 aa5.06□□□□□ -1.6
CCS1YMR038C YJR039WP47107 1121 aa5.06□□□□□ -1.6
CCS1YMR038C BFA1P47113 574 aa5.06□□□□□ -1.6
CCS1YMR038C PMT3P47190 753 aa5.06□□□□□ -1.6
CCS1YMR038C CAF130P53280 1122 aaPredicted RBP5.06□□□□□ -1.6
CCS1YMR038C SLI1P53304 468 aa5.06□□□□□ -1.6
CCS1YMR038C ALG11P53954 548 aaKnown RBP5.06□□□□□ -1.6
CCS1YMR038C RNT1Q02555 471 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms