RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	RVB2	Q12464	471 aa	Known RBP	2.24	□□□□□ -2.05
VPS34	YLR240W	YMR084W	A2P2R3	262 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	AAC1	P04710	309 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	YLF2	P38746	405 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	YIR014W	P40570	242 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	SND1	Q04007	877 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	ROM2	P51862	1356 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	VAS1	P07806	1104 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	DAL5	P15365	543 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	BET2	P20133	325 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	SUI2	P20459	304 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	CDC5	P32562	705 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	SDS22	P36047	338 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	HOT13	P36078	116 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	SCS2	P40075	244 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	UTP10	P42945	1769 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	COS12	P53053	380 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	PAP2	P53632	584 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	MDG1	P53885	366 aa		2.23	□□□□□ -2.05
VPS34	YLR240W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
VPS34	YLR240W	TMA7	Q3E764	64 aa	Known RBP	2.23	□□□□□ -2.05
VPS34	YLR240W	HEM1	P09950	548 aa	Predicted RBP	2.22	□□□□□ -2.05
VPS34	YLR240W	NIC96	P34077	839 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	IMA5	P40884	581 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	YFL015C	P43578	164 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	TAX4	P47030	604 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	ASK10	P48361	1146 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	DSD1	P53095	428 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	HEF3	P53978	1044 aa	Known RBP	2.22	□□□□□ -2.05
VPS34	YLR240W	THI7	Q05998	598 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	CRT10	Q08226	957 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	PCL8	Q08966	492 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	AI5_ALPHA	Q9ZZX1	630 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	ADH4	P10127	382 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	ERG11	P10614	530 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	MBR1	P23493	339 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	STB5	P38699	743 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	SWD1	P39706	426 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	OPT1	P40897	799 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	TDA10	P42938	290 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	POL31	P46957	487 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	MPP10	P47083	593 aa	Known RBP	2.22	□□□□□ -2.05
VPS34	YLR240W	CEG1	Q01159	459 aa	Predicted RBP	2.22	□□□□□ -2.05
VPS34	YLR240W	TRS31	Q03337	283 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	SEG1	Q04279	960 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	ENT2	Q05785	613 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	SLM3	Q12093	417 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	ARP7	Q12406	477 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	MPD2	Q99316	277 aa		2.22	□□□□□ -2.05
VPS34	YLR240W	RPS24A	P0CX31	135 aa	Known RBP	2.21	□□□□□ -2.05
VPS34	YLR240W	RPS24B	P0CX32	135 aa	Known RBP	2.21	□□□□□ -2.05
VPS34	YLR240W	RPC34	P32910	317 aa		2.21	□□□□□ -2.05
VPS34	YLR240W	RRP46	P53256	223 aa	Predicted RBP	2.21	□□□□□ -2.05
VPS34	YLR240W	YNL092W	P53934	400 aa		2.21	□□□□□ -2.05
VPS34	YLR240W	WAR1	Q03631	944 aa		2.21	□□□□□ -2.05
VPS34	YLR240W	RIM13	Q03792	727 aa		2.21	□□□□□ -2.05
VPS34	YLR240W	CRD1	Q07560	283 aa		2.21	□□□□□ -2.05
VPS34	YLR240W	YCR061W	P25639	631 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	GSY2	P27472	705 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	VFA1	P40080	203 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	HIM1	Q06674	414 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	PGK1	P00560	416 aa	Known RBP	2.21	□□□□□ -2.06
VPS34	YLR240W	SST2	P11972	698 aa	Known RBP	2.21	□□□□□ -2.06
VPS34	YLR240W	YPK1	P12688	680 aa	Known RBP	2.21	□□□□□ -2.06
VPS34	YLR240W	MRPL9	P31334	269 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	GRX7	P38068	203 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	RRP8	P38961	392 aa	Known RBP	2.21	□□□□□ -2.06
VPS34	YLR240W	EXO1	P39875	702 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	RAD26	P40352	1085 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	IDS2	P46958	469 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	AAD4	Q07747	329 aa		2.21	□□□□□ -2.06
VPS34	YLR240W	RPS19A	P07280	144 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	RPS19B	P07281	144 aa	Predicted RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	AQY1	P0CD91	305 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	YJU2	P28320	278 aa	Predicted RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	PRE2	P30656	287 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	GDA1	P32621	518 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	APD1	P38281	316 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	LTP1	P40347	161 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	YJL043W	P47053	257 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	YJR008W	P47085	338 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	MET14	Q02196	202 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	IRC3	Q06683	689 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	YOL114C	Q12322	202 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	RAD50	P12753	1312 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	CHO2	P05374	869 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	SUP35	P05453	685 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	ATP4	P05626	244 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	RPS7A	P26786	190 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	FRD1	P32614	470 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	VPS64	Q03944	604 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	EIS1	Q05050	843 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	SPN1	Q06505	410 aa	Predicted RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	YOL057W	Q08225	711 aa		2.2	□□□□□ -2.06
VPS34	YLR240W	AHA1	Q12449	350 aa	Known RBP	2.2	□□□□□ -2.06
VPS34	YLR240W	PDR18	P53756	1333 aa		2.19	□□□□□ -2.06
VPS34	YLR240W	MDM10	P18409	493 aa		2.19	□□□□□ -2.06
VPS34	YLR240W	KGD2	P19262	463 aa	Predicted RBP	2.19	□□□□□ -2.06
VPS34	YLR240W	AMD2	P22580	549 aa		2.19	□□□□□ -2.06
VPS34	YLR240W	APN1	P22936	367 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms