RNA–Protein interactions for RNA: YLR234W

TOP3, Transcript of DNA Topoisomerase III, yeast

Gene TOP3, Length 1,971 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP3	YLR234W	MRP13	P12686	339 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	VPS34	P22543	875 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	MEI4	P29467	408 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	TRM2	P33753	639 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	VPS51	P36116	164 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	APE3	P37302	537 aa	Known RBP	7.69	□□□□□ -1.18
TOP3	YLR234W	PFK26	P40433	827 aa	Known RBP	7.69	□□□□□ -1.18
TOP3	YLR234W	FIG4	P42837	879 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	AVT1	P47082	602 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	MSE1	P48525	536 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	DIE2	P50076	525 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	UTP8	P53276	713 aa	Known RBP	7.69	□□□□□ -1.18
TOP3	YLR234W	YNL115C	P53925	644 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	ROD1	Q02805	837 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	SNX3	Q08826	162 aa	Known RBP	7.69	□□□□□ -1.18
TOP3	YLR234W	SPE3	Q12074	293 aa	Known RBP	7.69	□□□□□ -1.18
TOP3	YLR234W	TY3A-G	Q12173	290 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	HSP42	Q12329	375 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	YDR461C-A	Q2V2P7	80 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	TY3A-I	Q99219	290 aa		7.69	□□□□□ -1.18
TOP3	YLR234W	CHS2	P14180	963 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	STF2	P16965	84 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	CBF1	P17106	351 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	RAD14	P28519	371 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	VHC1	P38329	1120 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	TAM41	P53230	385 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YNR063W	P53749	607 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	IMP4	P53941	290 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	DAK1	P54838	584 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	EMI2	Q04409	500 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	YMR226C	Q05016	267 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	YLR297W	Q05899	129 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	RCN2	Q12044	265 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	MED4	Q12343	284 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	CCP1	P00431	361 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	DED1	P06634	604 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	DAP2	P18962	818 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YUR1	P26725	428 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	COT1	P32798	439 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YKL023W	P36103	277 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	UTP30	P36144	274 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	RFS1	P38234	210 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	STP2	P38704	541 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
TOP3	YLR234W	YEL025C	P39991	1188 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YER137C	P40083	148 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	UBP7	P40453	1071 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	INP51	P40559	946 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	COS5	P47187	383 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	RPS7B	P48164	190 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	KEL2	P50090	882 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	NUP84	P52891	726 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	TIM8	P57744	87 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	CEG1	Q01159	459 aa	Predicted RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	CLU1	Q03690	1277 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	YMR018W	Q04364	514 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	COQ9	Q05779	260 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YCS4	Q06156	1176 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	MCH5	Q08777	521 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	MSC6	Q08818	692 aa	Known RBP	7.68	□□□□□ -1.18
TOP3	YLR234W	YIL002W-A	Q3E7Z5	69 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	YBR298C-A	Q8TGK4	73 aa		7.68	□□□□□ -1.18
TOP3	YLR234W	GPM1	P00950	247 aa	Known RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	HEM15	P16622	393 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	DBP3	P20447	523 aa	Known RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	BLI1	P35727	113 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	SEO1	P39709	593 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	ALD5	P40047	520 aa	Known RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	PRK1	P40494	810 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	YJL107C	P42947	387 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	YFL066C	P43538	392 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	LIA1	P47120	325 aa	Known RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	NMA2	P53204	395 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	RPL22B	P56628	122 aa	Known RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	MTG1	Q03151	367 aa	Predicted RBP	7.67	□□□□□ -1.18
TOP3	YLR234W	ASA1	Q06822	443 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	APC5	Q08683	685 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	AI5_ALPHA	Q9ZZX1	630 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	ECM29	P38737	1868 aa		7.67	□□□□□ -1.18
TOP3	YLR234W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.66	□□□□□ -1.18	not detected
TOP3	YLR234W	PEX3	P28795	441 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	MOT2	P34909	587 aa	Known RBP	7.66	□□□□□ -1.18
TOP3	YLR234W	YPK3	P38070	525 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	MSG5	P38590	489 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	RGA1	P39083	1007 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	FRT2	P39734	528 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	DDI1	P40087	428 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	YER186C	P40101	306 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	ALT1	P52893	592 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	MET13	P53128	600 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	RTT102	P53330	157 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	DBP6	P53734	629 aa	Known RBP	7.66	□□□□□ -1.18
TOP3	YLR234W	SLT2	Q00772	484 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	PEX10	Q05568	337 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	BRE4	Q07660	1125 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	IES4	Q08561	116 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	RAX1	Q08760	435 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	YPL191C	Q08930	360 aa		7.66	□□□□□ -1.18
TOP3	YLR234W	MSD1	P15179	658 aa	Known RBP	7.66	□□□□□ -1.18
TOP3	YLR234W	COQ8	P27697	501 aa		7.66	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 85.2 ms